RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 PSPHP1O15172 72 aa1.46□□□□□ -2.18
PHC3-213ENST00000491258 IGLC3P0DOY3 106 aa1.46□□□□□ -2.18
PHC3-213ENST00000491258 NPC2P61916 151 aa1.46□□□□□ -2.18
PHC3-213ENST00000491258 FAM229BQ4G0N7 80 aa1.46□□□□□ -2.18
PHC3-213ENST00000491258 SPATA45Q537H7 98 aa1.46□□□□□ -2.18
PHC3-213ENST00000491258 KTN1-AS1Q86SY8 53 aa1.46□□□□□ -2.18
PHC3-213ENST00000491258 RBM12B-AS1Q9P1G2 102 aa1.46□□□□□ -2.18
PHC3-213ENST00000491258 SERP1Q9Y6X1 66 aa1.46□□□□□ -2.18
PHC3-213ENST00000491258 AHNAK2Q8IVF2 5795 aa1.45□□□□□ -2.18
PHC3-213ENST00000491258 M0R378 163 aa1.45□□□□□ -2.18
PHC3-213ENST00000491258 MT-ATP8P03928 68 aa1.45□□□□□ -2.18
PHC3-213ENST00000491258 ATP5EP56381 51 aaPredicted RBP1.45□□□□□ -2.18
PHC3-213ENST00000491258 KRTDAPP60985 99 aa1.45□□□□□ -2.18
PHC3-213ENST00000491258 C6orf99Q4VX62 202 aa1.45□□□□□ -2.18
PHC3-213ENST00000491258 Q5XG85 94 aa1.45□□□□□ -2.18
PHC3-213ENST00000491258 LCA10Q71F78 164 aa1.45□□□□□ -2.18
PHC3-213ENST00000491258 Q8NDZ9 215 aa1.45□□□□□ -2.18
PHC3-213ENST00000491258 PPDPFLQ8WWR9 84 aa1.45□□□□□ -2.18
PHC3-213ENST00000491258 SND1-IT1Q9HBX3 110 aa1.45□□□□□ -2.18
PHC3-213ENST00000491258 IGKV2D-26A0A0A0MRZ7 120 aa1.44□□□□□ -2.18
PHC3-213ENST00000491258 A0A1B0GW54 56 aa1.44□□□□□ -2.18
PHC3-213ENST00000491258 A0A1W2PPM0 123 aa1.44□□□□□ -2.18
PHC3-213ENST00000491258 ATOX1O00244 68 aa1.44□□□□□ -2.18
PHC3-213ENST00000491258 COX7CP15954 63 aa1.44□□□□□ -2.18
PHC3-213ENST00000491258 ZNF22P17026 224 aaPredicted RBP1.44□□□□□ -2.18
PHC3-213ENST00000491258 PRLHP81277 87 aa1.44□□□□□ -2.18
PHC3-213ENST00000491258 COX17Q14061 63 aa1.44□□□□□ -2.18
PHC3-213ENST00000491258 TPRXLQ17RH7 258 aa1.44□□□□□ -2.18
PHC3-213ENST00000491258 BVES-AS1Q5T3Y7 98 aa1.44□□□□□ -2.18
PHC3-213ENST00000491258 TEN1Q86WV5 123 aa1.44□□□□□ -2.18
PHC3-213ENST00000491258 BAGE3Q86Y29 109 aa1.44□□□□□ -2.18
PHC3-213ENST00000491258 ZNF625Q96I27 306 aaPredicted RBP1.44□□□□□ -2.18
PHC3-213ENST00000491258 RETNLBQ9BQ08 111 aa1.44□□□□□ -2.18
PHC3-213ENST00000491258 MUC17Q685J3 4493 aa1.44□□□□□ -2.18
PHC3-213ENST00000491258 IGHV6-1A0A0B4J1U7 121 aa1.43□□□□□ -2.18
PHC3-213ENST00000491258 C11orf86A6NJI1 115 aa1.43□□□□□ -2.18
PHC3-213ENST00000491258 H3BUT2 72 aa1.43□□□□□ -2.18
PHC3-213ENST00000491258 TMEM256-PLSCR3K7ERE1 68 aa1.43□□□□□ -2.18
PHC3-213ENST00000491258 LST1O00453 97 aa1.43□□□□□ -2.18
PHC3-213ENST00000491258 HBDP02042 147 aa1.43□□□□□ -2.18
PHC3-213ENST00000491258 SMIM13P0DJ93 91 aa1.43□□□□□ -2.18
PHC3-213ENST00000491258 TMEM170BQ5T4T1 132 aa1.43□□□□□ -2.18
PHC3-213ENST00000491258 SPAG11AQ6PDA7 123 aa1.43□□□□□ -2.18
PHC3-213ENST00000491258 C18orf32Q8TCD1 76 aa1.43□□□□□ -2.18
PHC3-213ENST00000491258 SPRR4Q96PI1 79 aa1.43□□□□□ -2.18
PHC3-213ENST00000491258 KRTAP2-1Q9BYU5 128 aa1.43□□□□□ -2.18
PHC3-213ENST00000491258 KCNQ1DNQ9H478 68 aa1.43□□□□□ -2.18
PHC3-213ENST00000491258 MUC12Q9UKN1 5478 aa1.43□□□□□ -2.18
PHC3-213ENST00000491258 TRAV12-1A0A0B4J245 112 aa1.42□□□□□ -2.18
PHC3-213ENST00000491258 LOC107984156A0A0G2JMH3 177 aa1.42□□□□□ -2.18
PHC3-213ENST00000491258 TMEM223A0PJW6 202 aa1.42□□□□□ -2.18
PHC3-213ENST00000491258 A8MUN3 132 aa1.42□□□□□ -2.18
PHC3-213ENST00000491258 SYS1-DBNDD2H3BUS1 97 aa1.42□□□□□ -2.18
PHC3-213ENST00000491258 ZNF73O43830 326 aaPredicted RBP1.42□□□□□ -2.18
PHC3-213ENST00000491258 IGKCP01834 107 aa1.42□□□□□ -2.18
PHC3-213ENST00000491258 ACYP1P07311 99 aa1.42□□□□□ -2.18
PHC3-213ENST00000491258 SPRR1AP35321 89 aa1.42□□□□□ -2.18
PHC3-213ENST00000491258 LINC00158P58513 81 aa1.42□□□□□ -2.18
PHC3-213ENST00000491258 HIST1H4AP62805 103 aaKnown RBP1.42□□□□□ -2.18
PHC3-213ENST00000491258 ETDBQ3ZM63 59 aa1.42□□□□□ -2.18
PHC3-213ENST00000491258 SFTA2Q6UW10 78 aa1.42□□□□□ -2.18
PHC3-213ENST00000491258 FP248Q71RG6 208 aaPredicted RBP1.42□□□□□ -2.18
PHC3-213ENST00000491258 ARL17AQ8IVW1 177 aa1.42□□□□□ -2.18
PHC3-213ENST00000491258 HIGD2AQ9BW72 106 aa1.42□□□□□ -2.18
PHC3-213ENST00000491258 TRAPPC1Q9Y5R8 145 aa1.42□□□□□ -2.18
PHC3-213ENST00000491258 ZNF706Q9Y5V0 76 aaPredicted RBP1.42□□□□□ -2.18
PHC3-213ENST00000491258 TRBV7-7A0A0K0K1E9 115 aa1.41□□□□□ -2.18
PHC3-213ENST00000491258 TRBV10-3A0A0K0K1G6 114 aa1.41□□□□□ -2.18
PHC3-213ENST00000491258 NDUFC1O43677 76 aa1.41□□□□□ -2.18
PHC3-213ENST00000491258 TIMM17BO60830 172 aa1.41□□□□□ -2.18
PHC3-213ENST00000491258 ERC2-IT1O76042 136 aa1.41□□□□□ -2.18
PHC3-213ENST00000491258 SPINK1P00995 79 aa1.41□□□□□ -2.18
PHC3-213ENST00000491258 ASB16-AS1Q495Z4 193 aa1.41□□□□□ -2.18
PHC3-213ENST00000491258 SSBP3-AS1Q7Z2R9 100 aa1.41□□□□□ -2.18
PHC3-213ENST00000491258 MIR7-3HGQ8N6C7 128 aa1.41□□□□□ -2.18
PHC3-213ENST00000491258 LINC00337Q8N6G1 96 aa1.41□□□□□ -2.18
PHC3-213ENST00000491258 DAND5Q8N907 189 aa1.41□□□□□ -2.18
PHC3-213ENST00000491258 SMCR5Q8TEV8 140 aa1.41□□□□□ -2.18
PHC3-213ENST00000491258 IFI27L1Q96BM0 104 aa1.41□□□□□ -2.18
PHC3-213ENST00000491258 CHCHD1Q96BP2 118 aaKnown RBP1.41□□□□□ -2.18
PHC3-213ENST00000491258 NDUFA12Q9UI09 145 aa1.41□□□□□ -2.18
PHC3-213ENST00000491258 TRBV10-2A0A0K0K1G8 114 aa1.4□□□□□ -2.19
PHC3-213ENST00000491258 MYMXA0A1B0GTQ4 84 aa1.4□□□□□ -2.19
PHC3-213ENST00000491258 ETDCA0A1B0GVM5 59 aa1.4□□□□□ -2.19
PHC3-213ENST00000491258 A8MUU9 505 aa1.4□□□□□ -2.19
PHC3-213ENST00000491258 K7ERJ3 54 aa1.4□□□□□ -2.19
PHC3-213ENST00000491258 NCR3O14931 201 aa1.4□□□□□ -2.19
PHC3-213ENST00000491258 IGLV6-57P01721 117 aa1.4□□□□□ -2.19
PHC3-213ENST00000491258 LINC00313P59037 77 aa1.4□□□□□ -2.19
PHC3-213ENST00000491258 TSPEAR-AS2P59090 65 aa1.4□□□□□ -2.19
PHC3-213ENST00000491258 RPS29P62273 56 aaKnown RBP1.4□□□□□ -2.19
PHC3-213ENST00000491258 KRTAP5-10Q6L8G5 202 aa1.4□□□□□ -2.19
PHC3-213ENST00000491258 C7orf65Q6ZTY9 151 aa1.4□□□□□ -2.19
PHC3-213ENST00000491258 FAM19A2Q8N3H0 131 aa1.4□□□□□ -2.19
PHC3-213ENST00000491258 SERP2Q8N6R1 65 aa1.4□□□□□ -2.19
PHC3-213ENST00000491258 DSCR8Q96T75 97 aa1.4□□□□□ -2.19
PHC3-213ENST00000491258 Q9BRP9 147 aa1.4□□□□□ -2.19
PHC3-213ENST00000491258 hADV29S1A0JD25 119 aa1.39□□□□□ -2.19
PHC3-213ENST00000491258 K7ERS5 55 aa1.39□□□□□ -2.19
PHC3-213ENST00000491258 LEPROTO15243 131 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms