RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 KRTAP10-6P60371 365 aaPredicted RBP7.83□□□□□ -1.16
COL27A1-206ENST00000490831 TRBV20-1A0A075B6N2 111 aa7.82□□□□□ -1.16
COL27A1-206ENST00000490831 IGHV6-1A0A0B4J1U7 121 aa7.82□□□□□ -1.16
COL27A1-206ENST00000490831 A0A1B0GVX0 72 aa7.81□□□□□ -1.16
COL27A1-206ENST00000490831 C8orf87E5RJ46 101 aa7.81□□□□□ -1.16
COL27A1-206ENST00000490831 J3KT08 172 aa7.81□□□□□ -1.16
COL27A1-206ENST00000490831 PDE6GP18545 87 aa7.8□□□□□ -1.16
COL27A1-206ENST00000490831 M0R2T5 61 aa7.78□□□□□ -1.16
COL27A1-206ENST00000490831 BATFQ16520 125 aa7.78□□□□□ -1.16
COL27A1-206ENST00000490831 C9orf118A6NHY6 69 aa7.76□□□□□ -1.17
COL27A1-206ENST00000490831 KRTAP9-6A0A140TA67 174 aa7.75□□□□□ -1.17
COL27A1-206ENST00000490831 C14orf132Q9NPU4 83 aa7.75□□□□□ -1.17
COL27A1-206ENST00000490831 TAX1BP3O14907 124 aa7.74□□□□□ -1.17
COL27A1-206ENST00000490831 A0A1W2PPM0 123 aa7.72□□□□□ -1.17
COL27A1-206ENST00000490831 A8MWP4 228 aa7.71□□□□□ -1.18
COL27A1-206ENST00000490831 H3BT86 120 aa7.71□□□□□ -1.18
COL27A1-206ENST00000490831 NDUFB1O75438 58 aa7.71□□□□□ -1.18
COL27A1-206ENST00000490831 MPLKIPQ8TAP9 179 aa7.71□□□□□ -1.18
COL27A1-206ENST00000490831 Q8N9P0 234 aaPredicted RBP7.7□□□□□ -1.18
COL27A1-206ENST00000490831 HRES1P13985 223 aa7.69□□□□□ -1.18
COL27A1-206ENST00000490831 IGKV3D-7A0A0C4DH55 119 aa7.68□□□□□ -1.18
COL27A1-206ENST00000490831 C8orf17Q9NRJ1 99 aa7.68□□□□□ -1.18
COL27A1-206ENST00000490831 ZCCHC13Q8WW36 166 aaKnown RBP7.67□□□□□ -1.18
COL27A1-206ENST00000490831 NREPQ16612 68 aa7.66□□□□□ -1.18
COL27A1-206ENST00000490831 PRR15Q8IV56 129 aa7.64□□□□□ -1.19
COL27A1-206ENST00000490831 MTURNQ8N3F0 131 aa7.63□□□□□ -1.19
COL27A1-206ENST00000490831 RBM12B-AS1Q9P1G2 102 aa7.63□□□□□ -1.19
COL27A1-206ENST00000490831 CRCT1Q9UGL9 99 aa7.62□□□□□ -1.19
COL27A1-206ENST00000490831 Q6ZVQ6 151 aa7.61□□□□□ -1.19
COL27A1-206ENST00000490831 SPCS1Q9Y6A9 102 aa7.6□□□□□ -1.19
COL27A1-206ENST00000490831 FAM236DA0A1B0GTK5 79 aa7.59□□□□□ -1.19
COL27A1-206ENST00000490831 FAM236CP0DP71 79 aa7.59□□□□□ -1.19
COL27A1-206ENST00000490831 KRTAP9-8Q9BYQ0 159 aa7.59□□□□□ -1.19
COL27A1-206ENST00000490831 MMP24-AS1A0A0U1RRL7 71 aa7.58□□□□□ -1.2
COL27A1-206ENST00000490831 SPINK7P58062 85 aa7.58□□□□□ -1.2
COL27A1-206ENST00000490831 SMCPP49901 116 aaPredicted RBP7.56□□□□□ -1.2
COL27A1-206ENST00000490831 COL5A1-AS1Q5SY13 56 aa7.56□□□□□ -1.2
COL27A1-206ENST00000490831 TMEM254Q8TBM7 123 aa7.56□□□□□ -1.2
COL27A1-206ENST00000490831 FSIP2Q5CZC0 6907 aa7.56□□□□□ -1.2
COL27A1-206ENST00000490831 K7EQZ3 153 aa7.55□□□□□ -1.2
COL27A1-206ENST00000490831 MRPL34Q9BQ48 92 aaKnown RBP7.55□□□□□ -1.2
COL27A1-206ENST00000490831 hDV103S1A0JD37 113 aa7.52□□□□□ -1.21
COL27A1-206ENST00000490831 BPY2O14599 106 aa7.52□□□□□ -1.21
COL27A1-206ENST00000490831 PRO0461Q9UI25 63 aa7.52□□□□□ -1.21
COL27A1-206ENST00000490831 K7EP34 96 aa7.49□□□□□ -1.21
COL27A1-206ENST00000490831 MT2AP02795 61 aa7.46□□□□□ -1.22
COL27A1-206ENST00000490831 WFDC13Q8IUB5 93 aa7.46□□□□□ -1.22
COL27A1-206ENST00000490831 Q8N9L7 120 aa7.43□□□□□ -1.22
COL27A1-206ENST00000490831 LINC00846Q9NV44 126 aa7.43□□□□□ -1.22
COL27A1-206ENST00000490831 NDUFS5O43920 106 aa7.42□□□□□ -1.22
COL27A1-206ENST00000490831 MT1FP04733 61 aa7.4□□□□□ -1.22
COL27A1-206ENST00000490831 Q5W150 140 aa7.4□□□□□ -1.22
COL27A1-206ENST00000490831 CASC2Q6XLA1 102 aa7.4□□□□□ -1.22
COL27A1-206ENST00000490831 UBL5Q9BZL1 73 aa7.4□□□□□ -1.22
COL27A1-206ENST00000490831 GTF2H5Q6ZYL4 71 aa7.39□□□□□ -1.23
COL27A1-206ENST00000490831 USH2AO75445 5202 aa7.36□□□□□ -1.23
COL27A1-206ENST00000490831 F8W1H4 67 aa7.36□□□□□ -1.23
COL27A1-206ENST00000490831 HCG22E2RYF7 251 aa7.35□□□□□ -1.23
COL27A1-206ENST00000490831 C7orf65Q6ZTY9 151 aa7.35□□□□□ -1.23
COL27A1-206ENST00000490831 KRTAP9-3Q9BYQ3 159 aa7.35□□□□□ -1.23
COL27A1-206ENST00000490831 KRTAP10-10P60014 251 aa7.34□□□□□ -1.23
COL27A1-206ENST00000490831 PCP4L1A6NKN8 68 aa7.33□□□□□ -1.24
COL27A1-206ENST00000490831 CXCL6P80162 114 aa7.33□□□□□ -1.24
COL27A1-206ENST00000490831 IGKV2D-30A0A075B6S6 120 aa7.32□□□□□ -1.24
COL27A1-206ENST00000490831 IGKV2-30P06310 120 aa7.32□□□□□ -1.24
COL27A1-206ENST00000490831 H1FX-AS1Q4G0G2 97 aa7.32□□□□□ -1.24
COL27A1-206ENST00000490831 ETDBQ3ZM63 59 aa7.31□□□□□ -1.24
COL27A1-206ENST00000490831 SSPOA2VEC9 5147 aa7.3□□□□□ -1.24
COL27A1-206ENST00000490831 LCE2BO14633 110 aa7.29□□□□□ -1.24
COL27A1-206ENST00000490831 C4orf26Q17RF5 130 aa7.21□□□□□ -1.26
COL27A1-206ENST00000490831 TP53AIP1Q9HCN2 124 aa7.21□□□□□ -1.26
COL27A1-206ENST00000490831 ACYP1P07311 99 aa7.17□□□□□ -1.26
COL27A1-206ENST00000490831 FAM240AA0A1B0GVK7 77 aa7.15□□□□□ -1.26
COL27A1-206ENST00000490831 KRTAP3-1Q9BYR8 98 aa7.15□□□□□ -1.26
COL27A1-206ENST00000490831 FCGBPQ9Y6R7 5405 aaPredicted RBP7.13□□□□□ -1.27
COL27A1-206ENST00000490831 KRTAP19-1Q8IUB9 90 aa7.13□□□□□ -1.27
COL27A1-206ENST00000490831 ATP5EP2Q5VTU8 51 aa7.11□□□□□ -1.27
COL27A1-206ENST00000490831 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.09□□□□□ -1.27
COL27A1-206ENST00000490831 C1orf64Q8NEQ6 169 aa7.09□□□□□ -1.27
COL27A1-206ENST00000490831 CYP4F30PQ9H0H9 118 aa7.06□□□□□ -1.28
COL27A1-206ENST00000490831 TRAV22A0A0B4J277 110 aa7.05□□□□□ -1.28
COL27A1-206ENST00000490831 KRTAP19-6Q3LI70 58 aa7.05□□□□□ -1.28
COL27A1-206ENST00000490831 S4R3F8 94 aa7.05□□□□□ -1.28
COL27A1-206ENST00000490831 C5orf47Q569G3 176 aa7.04□□□□□ -1.28
COL27A1-206ENST00000490831 LCA10Q71F78 164 aa7.02□□□□□ -1.29
COL27A1-206ENST00000490831 LOC101927531A0A1B0GV80 90 aa7.01□□□□□ -1.29
COL27A1-206ENST00000490831 HIST1H4AP62805 103 aaKnown RBP7□□□□□ -1.29
COL27A1-206ENST00000490831 CSAG1Q6PB30 78 aa7□□□□□ -1.29
COL27A1-206ENST00000490831 UQCRQO14949 82 aa6.99□□□□□ -1.29
COL27A1-206ENST00000490831 LINC00643Q86TS7 51 aa6.99□□□□□ -1.29
COL27A1-206ENST00000490831 KRTAP9-7A8MTY7 169 aa6.98□□□□□ -1.29
COL27A1-206ENST00000490831 A0A1B0GV90 55 aa6.96□□□□□ -1.3
COL27A1-206ENST00000490831 KRTAP3-3Q9BYR6 98 aa6.95□□□□□ -1.3
COL27A1-206ENST00000490831 ATOX1O00244 68 aa6.94□□□□□ -1.3
COL27A1-206ENST00000490831 A0A087WVE0 104 aa6.93□□□□□ -1.3
COL27A1-206ENST00000490831 FAM236AA0A1B0GUQ0 79 aa6.92□□□□□ -1.3
COL27A1-206ENST00000490831 FAM236BA0A1B0GV22 79 aa6.92□□□□□ -1.3
COL27A1-206ENST00000490831 H0Y9P7 68 aa6.92□□□□□ -1.3
COL27A1-206ENST00000490831 SPRR2GQ9BYE4 73 aa6.88□□□□□ -1.31
COL27A1-206ENST00000490831 OCR1Q9BZK8 76 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms