RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 C21orf62-AS1Q17RA5 79 aa15.92■□□□□ 0.14
LDB1-204ENST00000490751 SMIM6P0DI80 62 aa15.88■□□□□ 0.13
LDB1-204ENST00000490751 Q6ZQT0 140 aa15.88■□□□□ 0.13
LDB1-204ENST00000490751 J3KT08 172 aa15.86■□□□□ 0.13
LDB1-204ENST00000490751 JMJD7-PLA2G4BH0Y9G9 81 aa15.85■□□□□ 0.13
LDB1-204ENST00000490751 FAM236DA0A1B0GTK5 79 aa15.81■□□□□ 0.12
LDB1-204ENST00000490751 FAM236CP0DP71 79 aa15.81■□□□□ 0.12
LDB1-204ENST00000490751 HRES1P13985 223 aa15.8■□□□□ 0.12
LDB1-204ENST00000490751 LOC110117498A0A087WWA1 95 aa15.79■□□□□ 0.12
LDB1-204ENST00000490751 MPLKIPQ8TAP9 179 aa15.76■□□□□ 0.11
LDB1-204ENST00000490751 LYRM7Q5U5X0 104 aa15.75■□□□□ 0.11
LDB1-204ENST00000490751 RBM12B-AS1Q9P1G2 102 aa15.75■□□□□ 0.11
LDB1-204ENST00000490751 A0A1B0GW54 56 aa15.74■□□□□ 0.11
LDB1-204ENST00000490751 NDUFB1O75438 58 aa15.74■□□□□ 0.11
LDB1-204ENST00000490751 PDE6GP18545 87 aa15.73■□□□□ 0.11
LDB1-204ENST00000490751 C14orf132Q9NPU4 83 aa15.73■□□□□ 0.11
LDB1-204ENST00000490751 TSTD3H0UI37 97 aa15.71■□□□□ 0.11
LDB1-204ENST00000490751 BATFQ16520 125 aa15.71■□□□□ 0.11
LDB1-204ENST00000490751 ZCCHC13Q8WW36 166 aaKnown RBP15.7■□□□□ 0.1
LDB1-204ENST00000490751 KRTAP9-8Q9BYQ0 159 aa15.7■□□□□ 0.1
LDB1-204ENST00000490751 A8MWP4 228 aa15.67■□□□□ 0.1
LDB1-204ENST00000490751 C8orf17Q9NRJ1 99 aa15.65■□□□□ 0.1
LDB1-204ENST00000490751 Q8N9P0 234 aaPredicted RBP15.64■□□□□ 0.09
LDB1-204ENST00000490751 IGKV3D-7A0A0C4DH55 119 aa15.62■□□□□ 0.09
LDB1-204ENST00000490751 SPINK7P58062 85 aa15.57■□□□□ 0.08
LDB1-204ENST00000490751 NREPQ16612 68 aa15.55■□□□□ 0.08
LDB1-204ENST00000490751 C9orf118A6NHY6 69 aa15.53■□□□□ 0.08
LDB1-204ENST00000490751 Q6ZVQ6 151 aa15.51■□□□□ 0.07
LDB1-204ENST00000490751 PRR15Q8IV56 129 aa15.51■□□□□ 0.07
LDB1-204ENST00000490751 MTURNQ8N3F0 131 aa15.51■□□□□ 0.07
LDB1-204ENST00000490751 H3BT86 120 aa15.49■□□□□ 0.07
LDB1-204ENST00000490751 MT2AP02795 61 aa15.49■□□□□ 0.07
LDB1-204ENST00000490751 TAX1BP3O14907 124 aa15.48■□□□□ 0.07
LDB1-204ENST00000490751 LOC105371267A0A1B0GV96 52 aa15.47■□□□□ 0.07
LDB1-204ENST00000490751 A0A1W2PPM0 123 aa15.47■□□□□ 0.07
LDB1-204ENST00000490751 MMP24-AS1A0A0U1RRL7 71 aa15.42■□□□□ 0.06
LDB1-204ENST00000490751 TMEM254Q8TBM7 123 aa15.39■□□□□ 0.05
LDB1-204ENST00000490751 WFDC13Q8IUB5 93 aa15.38■□□□□ 0.05
LDB1-204ENST00000490751 MRPL34Q9BQ48 92 aaKnown RBP15.38■□□□□ 0.05
LDB1-204ENST00000490751 MT1FP04733 61 aa15.37■□□□□ 0.05
LDB1-204ENST00000490751 K7EQZ3 153 aa15.36■□□□□ 0.05
LDB1-204ENST00000490751 USH2AO75445 5202 aa15.33■□□□□ 0.04
LDB1-204ENST00000490751 hDV103S1A0JD37 113 aa15.3■□□□□ 0.04
LDB1-204ENST00000490751 KRTAP10-10P60014 251 aa15.28■□□□□ 0.04
LDB1-204ENST00000490751 BPY2O14599 106 aa15.27■□□□□ 0.04
LDB1-204ENST00000490751 NDUFS5O43920 106 aa15.25■□□□□ 0.03
LDB1-204ENST00000490751 SPCS1Q9Y6A9 102 aa15.25■□□□□ 0.03
LDB1-204ENST00000490751 KRTAP9-3Q9BYQ3 159 aa15.21■□□□□ 0.03
LDB1-204ENST00000490751 SSPOA2VEC9 5147 aa15.2■□□□□ 0.02
LDB1-204ENST00000490751 LCE2BO14633 110 aa15.16■□□□□ 0.02
LDB1-204ENST00000490751 SMCPP49901 116 aaPredicted RBP15.16■□□□□ 0.02
LDB1-204ENST00000490751 Q8N9L7 120 aa15.13■□□□□ 0.01
LDB1-204ENST00000490751 IGKV2D-30A0A075B6S6 120 aa15.07■□□□□ 0
LDB1-204ENST00000490751 IGKV2-30P06310 120 aa15.07■□□□□ 0
LDB1-204ENST00000490751 Q5W150 140 aa15.07■□□□□ 0
LDB1-204ENST00000490751 CASC2Q6XLA1 102 aa15.07■□□□□ 0
LDB1-204ENST00000490751 COL5A1-AS1Q5SY13 56 aa15.06■□□□□ 0
LDB1-204ENST00000490751 H1FX-AS1Q4G0G2 97 aa15.02■□□□□ -0
LDB1-204ENST00000490751 C7orf65Q6ZTY9 151 aa15.02■□□□□ -0
LDB1-204ENST00000490751 PRO0461Q9UI25 63 aa15.02■□□□□ -0
LDB1-204ENST00000490751 HCG22E2RYF7 251 aa15.01□□□□□ -0.01
LDB1-204ENST00000490751 LINC00846Q9NV44 126 aa14.98□□□□□ -0.01
LDB1-204ENST00000490751 K7EP34 96 aa14.97□□□□□ -0.01
LDB1-204ENST00000490751 UBL5Q9BZL1 73 aa14.96□□□□□ -0.01
LDB1-204ENST00000490751 KRTAP9-1A8MXZ3 250 aaPredicted RBP14.95□□□□□ -0.02
LDB1-204ENST00000490751 KRTAP19-1Q8IUB9 90 aa14.93□□□□□ -0.02
LDB1-204ENST00000490751 CXCL6P80162 114 aa14.89□□□□□ -0.03
LDB1-204ENST00000490751 FCGBPQ9Y6R7 5405 aaPredicted RBP14.86□□□□□ -0.03
LDB1-204ENST00000490751 C4orf26Q17RF5 130 aa14.8□□□□□ -0.04
LDB1-204ENST00000490751 KRTAP9-7A8MTY7 169 aa14.78□□□□□ -0.04
LDB1-204ENST00000490751 GTF2H5Q6ZYL4 71 aa14.76□□□□□ -0.05
LDB1-204ENST00000490751 F8W1H4 67 aa14.67□□□□□ -0.06
LDB1-204ENST00000490751 ETDBQ3ZM63 59 aa14.65□□□□□ -0.06
LDB1-204ENST00000490751 KRTAP19-6Q3LI70 58 aa14.64□□□□□ -0.07
LDB1-204ENST00000490751 PCP4L1A6NKN8 68 aa14.63□□□□□ -0.07
LDB1-204ENST00000490751 TP53AIP1Q9HCN2 124 aa14.58□□□□□ -0.08
LDB1-204ENST00000490751 KRTAP3-1Q9BYR8 98 aa14.57□□□□□ -0.08
LDB1-204ENST00000490751 C5orf47Q569G3 176 aa14.54□□□□□ -0.08
LDB1-204ENST00000490751 C1orf64Q8NEQ6 169 aa14.51□□□□□ -0.09
LDB1-204ENST00000490751 S4R3F8 94 aa14.49□□□□□ -0.09
LDB1-204ENST00000490751 MACF1Q9UPN3 7388 aaKnown RBP14.41□□□□□ -0.1
LDB1-204ENST00000490751 LCA10Q71F78 164 aa14.39□□□□□ -0.11
LDB1-204ENST00000490751 FAM236AA0A1B0GUQ0 79 aa14.38□□□□□ -0.11
LDB1-204ENST00000490751 FAM236BA0A1B0GV22 79 aa14.38□□□□□ -0.11
LDB1-204ENST00000490751 CSAG1Q6PB30 78 aa14.37□□□□□ -0.11
LDB1-204ENST00000490751 ACYP1P07311 99 aa14.32□□□□□ -0.12
LDB1-204ENST00000490751 CYP4F30PQ9H0H9 118 aa14.31□□□□□ -0.12
LDB1-204ENST00000490751 TRAV22A0A0B4J277 110 aa14.28□□□□□ -0.12
LDB1-204ENST00000490751 FAM240AA0A1B0GVK7 77 aa14.24□□□□□ -0.13
LDB1-204ENST00000490751 ATP5EP2Q5VTU8 51 aa14.23□□□□□ -0.13
LDB1-204ENST00000490751 SYNE2Q8WXH0 6885 aaKnown RBP14.23□□□□□ -0.13
LDB1-204ENST00000490751 LOC101927531A0A1B0GV80 90 aa14.21□□□□□ -0.13
LDB1-204ENST00000490751 HIST1H4AP62805 103 aaKnown RBP14.18□□□□□ -0.14
LDB1-204ENST00000490751 KRTAP3-3Q9BYR6 98 aa14.17□□□□□ -0.14
LDB1-204ENST00000490751 SPRR2GQ9BYE4 73 aa14.11□□□□□ -0.15
LDB1-204ENST00000490751 A0A087WVE0 104 aa14.1□□□□□ -0.15
LDB1-204ENST00000490751 UQCRQO14949 82 aa14.09□□□□□ -0.15
LDB1-204ENST00000490751 MT1BP07438 61 aa14.09□□□□□ -0.15
LDB1-204ENST00000490751 KLKP1Q107X0 134 aa14.07□□□□□ -0.16
LDB1-204ENST00000490751 Q5VV11 94 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 231.3 ms