RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 A0A1B0GVX0 72 aa9.36□□□□□ -0.91
ERCC3-207ENST00000490062 ETDBQ3ZM63 59 aa9.36□□□□□ -0.91
ERCC3-207ENST00000490062 C8orf87E5RJ46 101 aa9.35□□□□□ -0.91
ERCC3-207ENST00000490062 LINC00313P59037 77 aa9.35□□□□□ -0.91
ERCC3-207ENST00000490062 A8MUU9 505 aa9.33□□□□□ -0.92
ERCC3-207ENST00000490062 KRTAP16-1A8MUX0 517 aa9.33□□□□□ -0.92
ERCC3-207ENST00000490062 A8MWP4 228 aa9.33□□□□□ -0.92
ERCC3-207ENST00000490062 DSCR10P59022 87 aa9.33□□□□□ -0.92
ERCC3-207ENST00000490062 NDUFB1O75438 58 aa9.32□□□□□ -0.92
ERCC3-207ENST00000490062 IGHV6-1A0A0B4J1U7 121 aa9.31□□□□□ -0.92
ERCC3-207ENST00000490062 PCOTHQ58A44 107 aa9.31□□□□□ -0.92
ERCC3-207ENST00000490062 NOTCH2NLQ7Z3S9 236 aa9.31□□□□□ -0.92
ERCC3-207ENST00000490062 A0A1B0GV90 55 aa9.3□□□□□ -0.92
ERCC3-207ENST00000490062 Q6ZVQ6 151 aa9.3□□□□□ -0.92
ERCC3-207ENST00000490062 IGKV3D-7A0A0C4DH55 119 aa9.29□□□□□ -0.92
ERCC3-207ENST00000490062 KRTAP4-1Q9BYQ7 146 aa9.29□□□□□ -0.92
ERCC3-207ENST00000490062 LINC00846Q9NV44 126 aa9.28□□□□□ -0.92
ERCC3-207ENST00000490062 PRR15Q8IV56 129 aa9.27□□□□□ -0.93
ERCC3-207ENST00000490062 UBL5Q9BZL1 73 aa9.25□□□□□ -0.93
ERCC3-207ENST00000490062 BPY2O14599 106 aa9.24□□□□□ -0.93
ERCC3-207ENST00000490062 ATP11AUNQ6ZP68 121 aa9.23□□□□□ -0.93
ERCC3-207ENST00000490062 C8orf17Q9NRJ1 99 aa9.23□□□□□ -0.93
ERCC3-207ENST00000490062 A0A0U1RQV1 116 aa9.21□□□□□ -0.94
ERCC3-207ENST00000490062 FAM240AA0A1B0GVK7 77 aa9.2□□□□□ -0.94
ERCC3-207ENST00000490062 Q8N9P0 234 aaPredicted RBP9.2□□□□□ -0.94
ERCC3-207ENST00000490062 K7EQZ3 153 aa9.19□□□□□ -0.94
ERCC3-207ENST00000490062 ACYP1P07311 99 aa9.19□□□□□ -0.94
ERCC3-207ENST00000490062 FAT4Q6V0I7 4981 aa9.18□□□□□ -0.94
ERCC3-207ENST00000490062 MMP24-AS1A0A0U1RRL7 71 aa9.17□□□□□ -0.94
ERCC3-207ENST00000490062 TMEM254Q8TBM7 123 aa9.14□□□□□ -0.95
ERCC3-207ENST00000490062 CXCL6P80162 114 aa9.13□□□□□ -0.95
ERCC3-207ENST00000490062 MRPL34Q9BQ48 92 aaKnown RBP9.11□□□□□ -0.95
ERCC3-207ENST00000490062 hDV103S1A0JD37 113 aa9.1□□□□□ -0.95
ERCC3-207ENST00000490062 KRTAP19-2Q3LHN2 52 aa9.08□□□□□ -0.96
ERCC3-207ENST00000490062 Q8N9L7 120 aa9.08□□□□□ -0.96
ERCC3-207ENST00000490062 ZCCHC13Q8WW36 166 aaKnown RBP9.07□□□□□ -0.96
ERCC3-207ENST00000490062 ATP5EP2Q5VTU8 51 aa9.04□□□□□ -0.96
ERCC3-207ENST00000490062 LCE2AQ5TA79 106 aaPredicted RBP9.03□□□□□ -0.96
ERCC3-207ENST00000490062 CASC2Q6XLA1 102 aa9.03□□□□□ -0.96
ERCC3-207ENST00000490062 LCE2CQ5TA81 110 aa9.02□□□□□ -0.97
ERCC3-207ENST00000490062 HCG22E2RYF7 251 aa9.01□□□□□ -0.97
ERCC3-207ENST00000490062 J3QR89 54 aa8.99□□□□□ -0.97
ERCC3-207ENST00000490062 WFDC13Q8IUB5 93 aa8.99□□□□□ -0.97
ERCC3-207ENST00000490062 LINC00643Q86TS7 51 aa8.97□□□□□ -0.97
ERCC3-207ENST00000490062 MPLKIPQ8TAP9 179 aa8.93□□□□□ -0.98
ERCC3-207ENST00000490062 NDUFS5O43920 106 aa8.92□□□□□ -0.98
ERCC3-207ENST00000490062 HRES1P13985 223 aa8.92□□□□□ -0.98
ERCC3-207ENST00000490062 SPINK7P58062 85 aa8.9□□□□□ -0.98
ERCC3-207ENST00000490062 Q5W150 140 aa8.88□□□□□ -0.99
ERCC3-207ENST00000490062 MT1HP80294 61 aa8.86□□□□□ -0.99
ERCC3-207ENST00000490062 TP53AIP1Q9HCN2 124 aa8.86□□□□□ -0.99
ERCC3-207ENST00000490062 FLGP20930 4061 aaPredicted RBP8.85□□□□□ -0.99
ERCC3-207ENST00000490062 COX6B2Q6YFQ2 88 aa8.85□□□□□ -0.99
ERCC3-207ENST00000490062 HIST1H4AP62805 103 aaKnown RBP8.82□□□□□ -1
ERCC3-207ENST00000490062 RBM12B-AS1Q9P1G2 102 aa8.82□□□□□ -1
ERCC3-207ENST00000490062 K7ERU9 68 aa8.81□□□□□ -1
ERCC3-207ENST00000490062 C7orf65Q6ZTY9 151 aa8.79□□□□□ -1
ERCC3-207ENST00000490062 A0A087WVE0 104 aa8.75□□□□□ -1.01
ERCC3-207ENST00000490062 IGKV2D-30A0A075B6S6 120 aa8.72□□□□□ -1.01
ERCC3-207ENST00000490062 IGKV2-30P06310 120 aa8.72□□□□□ -1.01
ERCC3-207ENST00000490062 FAM236DA0A1B0GTK5 79 aa8.71□□□□□ -1.02
ERCC3-207ENST00000490062 FAM236CP0DP71 79 aa8.71□□□□□ -1.02
ERCC3-207ENST00000490062 IMUPQ9GZP8 106 aa8.71□□□□□ -1.02
ERCC3-207ENST00000490062 UQCRQO14949 82 aa8.69□□□□□ -1.02
ERCC3-207ENST00000490062 TRAV22A0A0B4J277 110 aa8.68□□□□□ -1.02
ERCC3-207ENST00000490062 LORP23490 312 aaPredicted RBP8.64□□□□□ -1.03
ERCC3-207ENST00000490062 M0R2T5 61 aa8.63□□□□□ -1.03
ERCC3-207ENST00000490062 KRTAP10-6P60371 365 aaPredicted RBP8.63□□□□□ -1.03
ERCC3-207ENST00000490062 OCR1Q9BZK8 76 aa8.63□□□□□ -1.03
ERCC3-207ENST00000490062 LOC101927531A0A1B0GV80 90 aa8.61□□□□□ -1.03
ERCC3-207ENST00000490062 ATOX1O00244 68 aa8.61□□□□□ -1.03
ERCC3-207ENST00000490062 MT-ATP8P03928 68 aa8.61□□□□□ -1.03
ERCC3-207ENST00000490062 CYP4F30PQ9H0H9 118 aa8.59□□□□□ -1.03
ERCC3-207ENST00000490062 H0Y9P7 68 aa8.56□□□□□ -1.04
ERCC3-207ENST00000490062 H1FX-AS1Q4G0G2 97 aa8.56□□□□□ -1.04
ERCC3-207ENST00000490062 C4orf26Q17RF5 130 aa8.55□□□□□ -1.04
ERCC3-207ENST00000490062 C5orf47Q569G3 176 aa8.52□□□□□ -1.05
ERCC3-207ENST00000490062 SCGB1A1P11684 91 aa8.5□□□□□ -1.05
ERCC3-207ENST00000490062 KRTAP3-1Q9BYR8 98 aa8.5□□□□□ -1.05
ERCC3-207ENST00000490062 H3BPC8 53 aa8.49□□□□□ -1.05
ERCC3-207ENST00000490062 MP68P56378 58 aa8.49□□□□□ -1.05
ERCC3-207ENST00000490062 C1orf64Q8NEQ6 169 aa8.48□□□□□ -1.05
ERCC3-207ENST00000490062 SMIM20Q8N5G0 67 aa8.46□□□□□ -1.06
ERCC3-207ENST00000490062 LINC00208Q96KT6 92 aa8.46□□□□□ -1.06
ERCC3-207ENST00000490062 KRTAP9-8Q9BYQ0 159 aa8.46□□□□□ -1.06
ERCC3-207ENST00000490062 FAM236AA0A1B0GUQ0 79 aa8.45□□□□□ -1.06
ERCC3-207ENST00000490062 FAM236BA0A1B0GV22 79 aa8.45□□□□□ -1.06
ERCC3-207ENST00000490062 LCE2DQ5TA82 110 aaPredicted RBP8.44□□□□□ -1.06
ERCC3-207ENST00000490062 TRAV7A0A075B6U4 112 aa8.4□□□□□ -1.06
ERCC3-207ENST00000490062 KRTAP9-2Q9BYQ4 174 aa8.39□□□□□ -1.07
ERCC3-207ENST00000490062 KLKP1Q107X0 134 aa8.36□□□□□ -1.07
ERCC3-207ENST00000490062 MT2AP02795 61 aa8.35□□□□□ -1.07
ERCC3-207ENST00000490062 A8MUN3 132 aa8.33□□□□□ -1.08
ERCC3-207ENST00000490062 S4R3F8 94 aa8.32□□□□□ -1.08
ERCC3-207ENST00000490062 MT1FP04733 61 aa8.28□□□□□ -1.08
ERCC3-207ENST00000490062 LCA10Q71F78 164 aa8.28□□□□□ -1.08
ERCC3-207ENST00000490062 SERP2Q8N6R1 65 aa8.25□□□□□ -1.09
ERCC3-207ENST00000490062 CSAG1Q6PB30 78 aa8.24□□□□□ -1.09
ERCC3-207ENST00000490062 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
ERCC3-207ENST00000490062 KRTAP10-10P60014 251 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 980.6 ms