RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 C8orf87E5RJ46 101 aa5.92□□□□□ -1.46
CPSF7-212ENST00000489728 SMCPP49901 116 aaPredicted RBP5.92□□□□□ -1.46
CPSF7-212ENST00000489728 A0A1B0GVX0 72 aa5.91□□□□□ -1.46
CPSF7-212ENST00000489728 A8MUU9 505 aa5.91□□□□□ -1.46
CPSF7-212ENST00000489728 DEFB116Q30KQ4 102 aa5.91□□□□□ -1.46
CPSF7-212ENST00000489728 NDUFB1O75438 58 aa5.9□□□□□ -1.46
CPSF7-212ENST00000489728 DSCR10P59022 87 aa5.9□□□□□ -1.46
CPSF7-212ENST00000489728 ATP11AUNQ6ZP68 121 aa5.9□□□□□ -1.46
CPSF7-212ENST00000489728 KRTAP4-1Q9BYQ7 146 aa5.9□□□□□ -1.46
CPSF7-212ENST00000489728 F8W1H4 67 aa5.89□□□□□ -1.47
CPSF7-212ENST00000489728 NREPQ16612 68 aa5.89□□□□□ -1.47
CPSF7-212ENST00000489728 IGHV6-1A0A0B4J1U7 121 aa5.88□□□□□ -1.47
CPSF7-212ENST00000489728 KRTAP16-1A8MUX0 517 aa5.88□□□□□ -1.47
CPSF7-212ENST00000489728 A8MWP4 228 aa5.88□□□□□ -1.47
CPSF7-212ENST00000489728 FAT4Q6V0I7 4981 aa5.85□□□□□ -1.47
CPSF7-212ENST00000489728 NOTCH2NLQ7Z3S9 236 aa5.84□□□□□ -1.47
CPSF7-212ENST00000489728 IGKV3D-7A0A0C4DH55 119 aa5.83□□□□□ -1.48
CPSF7-212ENST00000489728 PRR15Q8IV56 129 aa5.83□□□□□ -1.48
CPSF7-212ENST00000489728 BPY2O14599 106 aa5.81□□□□□ -1.48
CPSF7-212ENST00000489728 LCE2AQ5TA79 106 aaPredicted RBP5.81□□□□□ -1.48
CPSF7-212ENST00000489728 Q6ZVQ6 151 aa5.81□□□□□ -1.48
CPSF7-212ENST00000489728 C8orf17Q9NRJ1 99 aa5.81□□□□□ -1.48
CPSF7-212ENST00000489728 UBL5Q9BZL1 73 aa5.8□□□□□ -1.48
CPSF7-212ENST00000489728 ETDBQ3ZM63 59 aa5.79□□□□□ -1.48
CPSF7-212ENST00000489728 Q8N9P0 234 aaPredicted RBP5.79□□□□□ -1.48
CPSF7-212ENST00000489728 LINC00846Q9NV44 126 aa5.78□□□□□ -1.48
CPSF7-212ENST00000489728 K7EQZ3 153 aa5.77□□□□□ -1.49
CPSF7-212ENST00000489728 KRTAP19-2Q3LHN2 52 aa5.77□□□□□ -1.49
CPSF7-212ENST00000489728 KRTAP3-3Q9BYR6 98 aa5.77□□□□□ -1.49
CPSF7-212ENST00000489728 KRTAP3-2Q9BYR7 98 aa5.77□□□□□ -1.49
CPSF7-212ENST00000489728 MMP24-AS1A0A0U1RRL7 71 aa5.76□□□□□ -1.49
CPSF7-212ENST00000489728 TMEM254Q8TBM7 123 aa5.76□□□□□ -1.49
CPSF7-212ENST00000489728 LCE2CQ5TA81 110 aa5.75□□□□□ -1.49
CPSF7-212ENST00000489728 ZCCHC13Q8WW36 166 aaKnown RBP5.74□□□□□ -1.49
CPSF7-212ENST00000489728 MRPL34Q9BQ48 92 aaKnown RBP5.74□□□□□ -1.49
CPSF7-212ENST00000489728 hDV103S1A0JD37 113 aa5.73□□□□□ -1.49
CPSF7-212ENST00000489728 ACYP1P07311 99 aa5.73□□□□□ -1.49
CPSF7-212ENST00000489728 FAM240AA0A1B0GVK7 77 aa5.72□□□□□ -1.49
CPSF7-212ENST00000489728 CXCL6P80162 114 aa5.71□□□□□ -1.5
CPSF7-212ENST00000489728 COX6B2Q6YFQ2 88 aa5.71□□□□□ -1.5
CPSF7-212ENST00000489728 A0A1B0GV90 55 aa5.68□□□□□ -1.5
CPSF7-212ENST00000489728 CASC2Q6XLA1 102 aa5.68□□□□□ -1.5
CPSF7-212ENST00000489728 Q8N9L7 120 aa5.68□□□□□ -1.5
CPSF7-212ENST00000489728 MT1HP80294 61 aa5.67□□□□□ -1.5
CPSF7-212ENST00000489728 HCG22E2RYF7 251 aa5.66□□□□□ -1.5
CPSF7-212ENST00000489728 NDUFS5O43920 106 aa5.65□□□□□ -1.5
CPSF7-212ENST00000489728 ATP5EP2Q5VTU8 51 aa5.65□□□□□ -1.5
CPSF7-212ENST00000489728 MPLKIPQ8TAP9 179 aa5.65□□□□□ -1.5
CPSF7-212ENST00000489728 RBM12B-AS1Q9P1G2 102 aa5.65□□□□□ -1.5
CPSF7-212ENST00000489728 HRES1P13985 223 aa5.64□□□□□ -1.51
CPSF7-212ENST00000489728 SPINK7P58062 85 aa5.64□□□□□ -1.51
CPSF7-212ENST00000489728 WFDC13Q8IUB5 93 aa5.64□□□□□ -1.51
CPSF7-212ENST00000489728 FAM236DA0A1B0GTK5 79 aa5.59□□□□□ -1.51
CPSF7-212ENST00000489728 FAM236CP0DP71 79 aa5.59□□□□□ -1.51
CPSF7-212ENST00000489728 J3QR89 54 aa5.58□□□□□ -1.52
CPSF7-212ENST00000489728 M0R2T5 61 aa5.58□□□□□ -1.52
CPSF7-212ENST00000489728 TP53AIP1Q9HCN2 124 aa5.58□□□□□ -1.52
CPSF7-212ENST00000489728 FLGP20930 4061 aaPredicted RBP5.58□□□□□ -1.52
CPSF7-212ENST00000489728 C7orf65Q6ZTY9 151 aa5.57□□□□□ -1.52
CPSF7-212ENST00000489728 LINC00643Q86TS7 51 aa5.57□□□□□ -1.52
CPSF7-212ENST00000489728 Q5W150 140 aa5.56□□□□□ -1.52
CPSF7-212ENST00000489728 LORP23490 312 aaPredicted RBP5.54□□□□□ -1.52
CPSF7-212ENST00000489728 KRTAP10-6P60371 365 aaPredicted RBP5.54□□□□□ -1.52
CPSF7-212ENST00000489728 IGKV2D-30A0A075B6S6 120 aa5.52□□□□□ -1.53
CPSF7-212ENST00000489728 IGKV2-30P06310 120 aa5.52□□□□□ -1.53
CPSF7-212ENST00000489728 HIST1H4AP62805 103 aaKnown RBP5.51□□□□□ -1.53
CPSF7-212ENST00000489728 TRAV22A0A0B4J277 110 aa5.46□□□□□ -1.54
CPSF7-212ENST00000489728 KRTAP9-2Q9BYQ4 174 aa5.46□□□□□ -1.54
CPSF7-212ENST00000489728 UQCRQO14949 82 aa5.45□□□□□ -1.54
CPSF7-212ENST00000489728 K7ERU9 68 aa5.44□□□□□ -1.54
CPSF7-212ENST00000489728 H1FX-AS1Q4G0G2 97 aa5.44□□□□□ -1.54
CPSF7-212ENST00000489728 A0A087WVE0 104 aa5.43□□□□□ -1.54
CPSF7-212ENST00000489728 LOC101927531A0A1B0GV80 90 aa5.43□□□□□ -1.54
CPSF7-212ENST00000489728 ATOX1O00244 68 aa5.43□□□□□ -1.54
CPSF7-212ENST00000489728 C4orf26Q17RF5 130 aa5.4□□□□□ -1.54
CPSF7-212ENST00000489728 KRTAP9-8Q9BYQ0 159 aa5.4□□□□□ -1.54
CPSF7-212ENST00000489728 IMUPQ9GZP8 106 aa5.39□□□□□ -1.55
CPSF7-212ENST00000489728 CYP4F30PQ9H0H9 118 aa5.39□□□□□ -1.55
CPSF7-212ENST00000489728 H0Y9P7 68 aa5.37□□□□□ -1.55
CPSF7-212ENST00000489728 OCR1Q9BZK8 76 aa5.37□□□□□ -1.55
CPSF7-212ENST00000489728 C1orf64Q8NEQ6 169 aa5.35□□□□□ -1.55
CPSF7-212ENST00000489728 MT2AP02795 61 aa5.34□□□□□ -1.55
CPSF7-212ENST00000489728 MP68P56378 58 aa5.33□□□□□ -1.56
CPSF7-212ENST00000489728 C5orf47Q569G3 176 aa5.33□□□□□ -1.56
CPSF7-212ENST00000489728 H3BPC8 53 aa5.32□□□□□ -1.56
CPSF7-212ENST00000489728 SCGB1A1P11684 91 aa5.32□□□□□ -1.56
CPSF7-212ENST00000489728 KRTAP3-1Q9BYR8 98 aa5.32□□□□□ -1.56
CPSF7-212ENST00000489728 MT-ATP8P03928 68 aa5.29□□□□□ -1.56
CPSF7-212ENST00000489728 LINC00208Q96KT6 92 aa5.29□□□□□ -1.56
CPSF7-212ENST00000489728 S4R3F8 94 aa5.29□□□□□ -1.56
CPSF7-212ENST00000489728 MT1FP04733 61 aa5.28□□□□□ -1.56
CPSF7-212ENST00000489728 SMIM20Q8N5G0 67 aa5.28□□□□□ -1.56
CPSF7-212ENST00000489728 KRTAP10-10P60014 251 aa5.27□□□□□ -1.57
CPSF7-212ENST00000489728 A8MUN3 132 aa5.26□□□□□ -1.57
CPSF7-212ENST00000489728 CSAG1Q6PB30 78 aa5.24□□□□□ -1.57
CPSF7-212ENST00000489728 LCA10Q71F78 164 aa5.24□□□□□ -1.57
CPSF7-212ENST00000489728 KRTAP9-6A0A140TA67 174 aa5.23□□□□□ -1.57
CPSF7-212ENST00000489728 FAM236AA0A1B0GUQ0 79 aa5.23□□□□□ -1.57
CPSF7-212ENST00000489728 FAM236BA0A1B0GV22 79 aa5.23□□□□□ -1.57
CPSF7-212ENST00000489728 TRAV7A0A075B6U4 112 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms