RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 MIEN1Q9BRT3 115 aa4.55□□□□□ -1.68
SSBP1-212ENST00000489378 PRO1933Q9H354 126 aa4.55□□□□□ -1.68
SSBP1-212ENST00000489378 KMT2DO14686 5537 aa4.55□□□□□ -1.68
SSBP1-212ENST00000489378 A0A0G2JQZ4 141 aa4.55□□□□□ -1.68
SSBP1-212ENST00000489378 TRBV7-6A0A0J9YX20 115 aa4.55□□□□□ -1.68
SSBP1-212ENST00000489378 LINC01549A6NIU2 74 aa4.55□□□□□ -1.68
SSBP1-212ENST00000489378 TAX1BP3O14907 124 aa4.55□□□□□ -1.68
SSBP1-212ENST00000489378 Q1RN00 199 aa4.55□□□□□ -1.68
SSBP1-212ENST00000489378 C20orf166-AS1Q96NR2 134 aa4.55□□□□□ -1.68
SSBP1-212ENST00000489378 TTTY13Q9BZ97 58 aa4.55□□□□□ -1.68
SSBP1-212ENST00000489378 TMEM223A0PJW6 202 aa4.54□□□□□ -1.68
SSBP1-212ENST00000489378 CCDC179H3BU77 68 aa4.54□□□□□ -1.68
SSBP1-212ENST00000489378 FABP2P12104 132 aa4.54□□□□□ -1.68
SSBP1-212ENST00000489378 BRK1Q8WUW1 75 aa4.54□□□□□ -1.68
SSBP1-212ENST00000489378 TRBV20-1A0A075B6N2 111 aa4.53□□□□□ -1.68
SSBP1-212ENST00000489378 ZNF73O43830 326 aaPredicted RBP4.53□□□□□ -1.68
SSBP1-212ENST00000489378 IGKCP01834 107 aa4.53□□□□□ -1.68
SSBP1-212ENST00000489378 TMEM170BQ5T4T1 132 aa4.53□□□□□ -1.68
SSBP1-212ENST00000489378 OBSCN-AS1Q96MR7 158 aa4.53□□□□□ -1.68
SSBP1-212ENST00000489378 TRAV23DV6A0A075B6W5 121 aa4.52□□□□□ -1.69
SSBP1-212ENST00000489378 TRBV10-2A0A0K0K1G8 114 aa4.52□□□□□ -1.69
SSBP1-212ENST00000489378 FAM236AA0A1B0GUQ0 79 aa4.52□□□□□ -1.69
SSBP1-212ENST00000489378 FAM236BA0A1B0GV22 79 aa4.52□□□□□ -1.69
SSBP1-212ENST00000489378 H3BMG7 143 aa4.52□□□□□ -1.69
SSBP1-212ENST00000489378 PLNP26678 52 aa4.51□□□□□ -1.69
SSBP1-212ENST00000489378 ADAMTSL4-AS1Q5T5F5 129 aa4.51□□□□□ -1.69
SSBP1-212ENST00000489378 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
SSBP1-212ENST00000489378 PCP2Q8IVA1 136 aa4.51□□□□□ -1.69
SSBP1-212ENST00000489378 KRTAP16-1A8MUX0 517 aa4.49□□□□□ -1.69
SSBP1-212ENST00000489378 S100A7L2Q5SY68 101 aa4.49□□□□□ -1.69
SSBP1-212ENST00000489378 GPR98Q8WXG9 6306 aa4.49□□□□□ -1.69
SSBP1-212ENST00000489378 LOC107984156A0A0G2JMH3 177 aa4.48□□□□□ -1.69
SSBP1-212ENST00000489378 TMEM258P61165 79 aa4.48□□□□□ -1.69
SSBP1-212ENST00000489378 ARL17AQ8IVW1 177 aa4.48□□□□□ -1.69
SSBP1-212ENST00000489378 DHRS4-AS1Q9P1J3 65 aa4.48□□□□□ -1.69
SSBP1-212ENST00000489378 A0A1B0GW54 56 aa4.47□□□□□ -1.69
SSBP1-212ENST00000489378 LEPROTO15243 131 aa4.47□□□□□ -1.69
SSBP1-212ENST00000489378 IFITM1P13164 125 aa4.47□□□□□ -1.69
SSBP1-212ENST00000489378 C2orf91Q6ZV80 131 aa4.47□□□□□ -1.69
SSBP1-212ENST00000489378 DEFB105AQ8NG35 78 aa4.47□□□□□ -1.69
SSBP1-212ENST00000489378 LITAFQ99732 161 aa4.47□□□□□ -1.69
SSBP1-212ENST00000489378 KRTAP2-3P0C7H8 128 aa4.46□□□□□ -1.69
SSBP1-212ENST00000489378 SPATA45Q537H7 98 aa4.46□□□□□ -1.69
SSBP1-212ENST00000489378 COPS9Q8WXC6 57 aa4.46□□□□□ -1.69
SSBP1-212ENST00000489378 KRTAP2-4Q9BYR9 128 aa4.46□□□□□ -1.69
SSBP1-212ENST00000489378 TCL1BO95988 128 aa4.46□□□□□ -1.7
SSBP1-212ENST00000489378 NMUP48645 174 aa4.46□□□□□ -1.7
SSBP1-212ENST00000489378 CXCL6P80162 114 aa4.46□□□□□ -1.7
SSBP1-212ENST00000489378 VAMP8Q9BV40 100 aa4.46□□□□□ -1.7
SSBP1-212ENST00000489378 A0A0J9YXY3 114 aa4.45□□□□□ -1.7
SSBP1-212ENST00000489378 TMEM256-PLSCR3K7ERE1 68 aa4.45□□□□□ -1.7
SSBP1-212ENST00000489378 COX8AP10176 69 aa4.45□□□□□ -1.7
SSBP1-212ENST00000489378 Q96NJ1 140 aa4.45□□□□□ -1.7
SSBP1-212ENST00000489378 HINT1P49773 126 aaPredicted RBP4.44□□□□□ -1.7
SSBP1-212ENST00000489378 SOSTDC1Q6X4U4 206 aa4.44□□□□□ -1.7
SSBP1-212ENST00000489378 TEX49A0A1B0GTD5 131 aa4.43□□□□□ -1.7
SSBP1-212ENST00000489378 MYMXA0A1B0GTQ4 84 aa4.43□□□□□ -1.7
SSBP1-212ENST00000489378 ZNF815PA8K554 130 aa4.43□□□□□ -1.7
SSBP1-212ENST00000489378 TEN1Q86WV5 123 aa4.43□□□□□ -1.7
SSBP1-212ENST00000489378 KRTAP5-9P26371 169 aa4.42□□□□□ -1.7
SSBP1-212ENST00000489378 CAMK2N1Q7Z7J9 78 aa4.42□□□□□ -1.7
SSBP1-212ENST00000489378 A8MUU9 505 aa4.41□□□□□ -1.7
SSBP1-212ENST00000489378 UQCRQO14949 82 aa4.41□□□□□ -1.7
SSBP1-212ENST00000489378 LINC01554Q52M75 96 aa4.41□□□□□ -1.7
SSBP1-212ENST00000489378 HRES1P13985 223 aa4.4□□□□□ -1.7
SSBP1-212ENST00000489378 IGFL1Q6UW32 110 aa4.4□□□□□ -1.7
SSBP1-212ENST00000489378 RAB37Q96AX2 223 aa4.4□□□□□ -1.7
SSBP1-212ENST00000489378 IGKV2D-30A0A075B6S6 120 aa4.39□□□□□ -1.71
SSBP1-212ENST00000489378 NPC2P61916 151 aa4.39□□□□□ -1.71
SSBP1-212ENST00000489378 TIMM17BO60830 172 aa4.38□□□□□ -1.71
SSBP1-212ENST00000489378 ELOF1P60002 83 aaKnown RBP4.38□□□□□ -1.71
SSBP1-212ENST00000489378 TRACP01848 142 aa4.38□□□□□ -1.71
SSBP1-212ENST00000489378 COX7BP24311 80 aa4.38□□□□□ -1.71
SSBP1-212ENST00000489378 HIGD1BQ9P298 99 aa4.38□□□□□ -1.71
SSBP1-212ENST00000489378 UQCR10Q9UDW1 63 aa4.38□□□□□ -1.71
SSBP1-212ENST00000489378 IGLV5-48A0A075B6I7 105 aa4.37□□□□□ -1.71
SSBP1-212ENST00000489378 H3BT86 120 aa4.37□□□□□ -1.71
SSBP1-212ENST00000489378 LINC00308Q8TCZ7 52 aa4.37□□□□□ -1.71
SSBP1-212ENST00000489378 K7ERJ3 54 aa4.36□□□□□ -1.71
SSBP1-212ENST00000489378 FXYD2P54710 66 aa4.36□□□□□ -1.71
SSBP1-212ENST00000489378 HIST1H4AP62805 103 aaKnown RBP4.36□□□□□ -1.71
SSBP1-212ENST00000489378 MUSTN1Q8IVN3 82 aa4.36□□□□□ -1.71
SSBP1-212ENST00000489378 SERP1Q9Y6X1 66 aa4.36□□□□□ -1.71
SSBP1-212ENST00000489378 A6NN06 94 aa4.35□□□□□ -1.71
SSBP1-212ENST00000489378 C8orf17Q9NRJ1 99 aa4.35□□□□□ -1.71
SSBP1-212ENST00000489378 TRBV7-7A0A0K0K1E9 115 aa4.34□□□□□ -1.71
SSBP1-212ENST00000489378 A8MWP4 228 aa4.33□□□□□ -1.72
SSBP1-212ENST00000489378 K7ERS5 55 aa4.33□□□□□ -1.72
SSBP1-212ENST00000489378 BVES-AS1Q5T3Y7 98 aa4.33□□□□□ -1.72
SSBP1-212ENST00000489378 C7orf65Q6ZTY9 151 aa4.33□□□□□ -1.72
SSBP1-212ENST00000489378 CEND1Q8N111 149 aa4.33□□□□□ -1.72
SSBP1-212ENST00000489378 LUZP6Q538Z0 58 aa4.31□□□□□ -1.72
SSBP1-212ENST00000489378 MT-ATP8P03928 68 aa4.3□□□□□ -1.72
SSBP1-212ENST00000489378 K7EP34 96 aa4.29□□□□□ -1.72
SSBP1-212ENST00000489378 BPY2O14599 106 aa4.29□□□□□ -1.72
SSBP1-212ENST00000489378 DSCR10P59022 87 aa4.29□□□□□ -1.72
SSBP1-212ENST00000489378 KRTAP2-1Q9BYU5 128 aa4.29□□□□□ -1.72
SSBP1-212ENST00000489378 F8W1H4 67 aa4.28□□□□□ -1.72
SSBP1-212ENST00000489378 F8WEM9 126 aa4.28□□□□□ -1.72
SSBP1-212ENST00000489378 SNCGO76070 127 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms