RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 FAM236CP0DP71 79 aa4.76□□□□□ -1.65
HDAC6-232ENST00000489053 LINC00472Q9H8W2 130 aa4.76□□□□□ -1.65
HDAC6-232ENST00000489053 A0A1B0GVX0 72 aa4.75□□□□□ -1.65
HDAC6-232ENST00000489053 KRTAP19-2Q3LHN2 52 aa4.75□□□□□ -1.65
HDAC6-232ENST00000489053 FLGP20930 4061 aaPredicted RBP4.74□□□□□ -1.65
HDAC6-232ENST00000489053 A0A1B0GW54 56 aa4.73□□□□□ -1.65
HDAC6-232ENST00000489053 Q6ZQT0 140 aa4.73□□□□□ -1.65
HDAC6-232ENST00000489053 LOC110117498A0A087WWA1 95 aa4.72□□□□□ -1.65
HDAC6-232ENST00000489053 C14orf132Q9NPU4 83 aa4.72□□□□□ -1.65
HDAC6-232ENST00000489053 RBM12B-AS1Q9P1G2 102 aa4.72□□□□□ -1.65
HDAC6-232ENST00000489053 NREPQ16612 68 aa4.7□□□□□ -1.66
HDAC6-232ENST00000489053 LCE2DQ5TA82 110 aaPredicted RBP4.7□□□□□ -1.66
HDAC6-232ENST00000489053 NOTCH2NLQ7Z3S9 236 aa4.7□□□□□ -1.66
HDAC6-232ENST00000489053 KRTAP9-6A0A140TA67 174 aa4.69□□□□□ -1.66
HDAC6-232ENST00000489053 KRTAP16-1A8MUX0 517 aa4.69□□□□□ -1.66
HDAC6-232ENST00000489053 KRTAP10-6P60371 365 aaPredicted RBP4.69□□□□□ -1.66
HDAC6-232ENST00000489053 COL5A1-AS1Q5SY13 56 aa4.69□□□□□ -1.66
HDAC6-232ENST00000489053 MTURNQ8N3F0 131 aa4.69□□□□□ -1.66
HDAC6-232ENST00000489053 C9orf118A6NHY6 69 aa4.68□□□□□ -1.66
HDAC6-232ENST00000489053 A8MWP4 228 aa4.68□□□□□ -1.66
HDAC6-232ENST00000489053 FSIP2Q5CZC0 6907 aa4.68□□□□□ -1.66
HDAC6-232ENST00000489053 A0A1W2PPM0 123 aa4.67□□□□□ -1.66
HDAC6-232ENST00000489053 H3BT86 120 aa4.67□□□□□ -1.66
HDAC6-232ENST00000489053 TAX1BP3O14907 124 aa4.67□□□□□ -1.66
HDAC6-232ENST00000489053 LORP23490 312 aaPredicted RBP4.66□□□□□ -1.66
HDAC6-232ENST00000489053 ZCCHC13Q8WW36 166 aaKnown RBP4.66□□□□□ -1.66
HDAC6-232ENST00000489053 C8orf17Q9NRJ1 99 aa4.65□□□□□ -1.67
HDAC6-232ENST00000489053 Q6ZVQ6 151 aa4.64□□□□□ -1.67
HDAC6-232ENST00000489053 IGKV3D-7A0A0C4DH55 119 aa4.63□□□□□ -1.67
HDAC6-232ENST00000489053 NDUFS5O43920 106 aa4.63□□□□□ -1.67
HDAC6-232ENST00000489053 PRR15Q8IV56 129 aa4.63□□□□□ -1.67
HDAC6-232ENST00000489053 SPCS1Q9Y6A9 102 aa4.63□□□□□ -1.67
HDAC6-232ENST00000489053 BPY2O14599 106 aa4.62□□□□□ -1.67
HDAC6-232ENST00000489053 SPINK7P58062 85 aa4.61□□□□□ -1.67
HDAC6-232ENST00000489053 HRES1P13985 223 aa4.6□□□□□ -1.67
HDAC6-232ENST00000489053 Q8N9P0 234 aaPredicted RBP4.6□□□□□ -1.67
HDAC6-232ENST00000489053 TMEM254Q8TBM7 123 aa4.6□□□□□ -1.67
HDAC6-232ENST00000489053 CRCT1Q9UGL9 99 aa4.6□□□□□ -1.67
HDAC6-232ENST00000489053 hDV103S1A0JD37 113 aa4.59□□□□□ -1.67
HDAC6-232ENST00000489053 MRPL34Q9BQ48 92 aaKnown RBP4.59□□□□□ -1.67
HDAC6-232ENST00000489053 K7EP34 96 aa4.57□□□□□ -1.68
HDAC6-232ENST00000489053 K7EQZ3 153 aa4.57□□□□□ -1.68
HDAC6-232ENST00000489053 WFDC13Q8IUB5 93 aa4.57□□□□□ -1.68
HDAC6-232ENST00000489053 MMP24-AS1A0A0U1RRL7 71 aa4.56□□□□□ -1.68
HDAC6-232ENST00000489053 GTF2H5Q6ZYL4 71 aa4.56□□□□□ -1.68
HDAC6-232ENST00000489053 UBL5Q9BZL1 73 aa4.56□□□□□ -1.68
HDAC6-232ENST00000489053 MPLKIPQ8TAP9 179 aa4.55□□□□□ -1.68
HDAC6-232ENST00000489053 CASC2Q6XLA1 102 aa4.54□□□□□ -1.68
HDAC6-232ENST00000489053 IGKV2D-30A0A075B6S6 120 aa4.53□□□□□ -1.68
HDAC6-232ENST00000489053 A0A1B0GV90 55 aa4.53□□□□□ -1.68
HDAC6-232ENST00000489053 IGKV2-30P06310 120 aa4.53□□□□□ -1.68
HDAC6-232ENST00000489053 Q8N9L7 120 aa4.52□□□□□ -1.69
HDAC6-232ENST00000489053 HCG22E2RYF7 251 aa4.5□□□□□ -1.69
HDAC6-232ENST00000489053 KRTAP10-10P60014 251 aa4.5□□□□□ -1.69
HDAC6-232ENST00000489053 C7orf65Q6ZTY9 151 aa4.5□□□□□ -1.69
HDAC6-232ENST00000489053 SMCPP49901 116 aaPredicted RBP4.49□□□□□ -1.69
HDAC6-232ENST00000489053 CXCL6P80162 114 aa4.49□□□□□ -1.69
HDAC6-232ENST00000489053 PRO0461Q9UI25 63 aa4.49□□□□□ -1.69
HDAC6-232ENST00000489053 F8W1H4 67 aa4.48□□□□□ -1.69
HDAC6-232ENST00000489053 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
HDAC6-232ENST00000489053 MT2AP02795 61 aa4.47□□□□□ -1.69
HDAC6-232ENST00000489053 LINC00846Q9NV44 126 aa4.47□□□□□ -1.69
HDAC6-232ENST00000489053 H1FX-AS1Q4G0G2 97 aa4.46□□□□□ -1.7
HDAC6-232ENST00000489053 ETDBQ3ZM63 59 aa4.44□□□□□ -1.7
HDAC6-232ENST00000489053 MT1FP04733 61 aa4.42□□□□□ -1.7
HDAC6-232ENST00000489053 Q5W150 140 aa4.42□□□□□ -1.7
HDAC6-232ENST00000489053 TP53AIP1Q9HCN2 124 aa4.41□□□□□ -1.7
HDAC6-232ENST00000489053 C4orf26Q17RF5 130 aa4.4□□□□□ -1.71
HDAC6-232ENST00000489053 USH2AO75445 5202 aa4.4□□□□□ -1.71
HDAC6-232ENST00000489053 ACYP1P07311 99 aa4.37□□□□□ -1.71
HDAC6-232ENST00000489053 KRTAP9-3Q9BYQ3 159 aa4.35□□□□□ -1.71
HDAC6-232ENST00000489053 SSPOA2VEC9 5147 aa4.35□□□□□ -1.71
HDAC6-232ENST00000489053 FAM236AA0A1B0GUQ0 79 aa4.34□□□□□ -1.71
HDAC6-232ENST00000489053 FAM236BA0A1B0GV22 79 aa4.34□□□□□ -1.71
HDAC6-232ENST00000489053 HIST1H4AP62805 103 aaKnown RBP4.34□□□□□ -1.71
HDAC6-232ENST00000489053 ATP5EP2Q5VTU8 51 aa4.34□□□□□ -1.71
HDAC6-232ENST00000489053 C1orf64Q8NEQ6 169 aa4.34□□□□□ -1.71
HDAC6-232ENST00000489053 S4R3F8 94 aa4.34□□□□□ -1.71
HDAC6-232ENST00000489053 J3QR89 54 aa4.33□□□□□ -1.72
HDAC6-232ENST00000489053 C5orf47Q569G3 176 aa4.32□□□□□ -1.72
HDAC6-232ENST00000489053 TRAV22A0A0B4J277 110 aa4.31□□□□□ -1.72
HDAC6-232ENST00000489053 FAM240AA0A1B0GVK7 77 aa4.31□□□□□ -1.72
HDAC6-232ENST00000489053 LCE2BO14633 110 aa4.31□□□□□ -1.72
HDAC6-232ENST00000489053 CSAG1Q6PB30 78 aa4.31□□□□□ -1.72
HDAC6-232ENST00000489053 LOC101927531A0A1B0GV80 90 aa4.29□□□□□ -1.72
HDAC6-232ENST00000489053 K7ERU9 68 aa4.28□□□□□ -1.72
HDAC6-232ENST00000489053 KRTAP19-1Q8IUB9 90 aa4.28□□□□□ -1.72
HDAC6-232ENST00000489053 ATOX1O00244 68 aa4.27□□□□□ -1.73
HDAC6-232ENST00000489053 CYP4F30PQ9H0H9 118 aa4.27□□□□□ -1.73
HDAC6-232ENST00000489053 UQCRQO14949 82 aa4.26□□□□□ -1.73
HDAC6-232ENST00000489053 FCGBPQ9Y6R7 5405 aaPredicted RBP4.26□□□□□ -1.73
HDAC6-232ENST00000489053 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.25□□□□□ -1.73
HDAC6-232ENST00000489053 H0Y9P7 68 aa4.25□□□□□ -1.73
HDAC6-232ENST00000489053 LCA10Q71F78 164 aa4.25□□□□□ -1.73
HDAC6-232ENST00000489053 LINC00643Q86TS7 51 aa4.25□□□□□ -1.73
HDAC6-232ENST00000489053 KRTAP3-1Q9BYR8 98 aa4.23□□□□□ -1.73
HDAC6-232ENST00000489053 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
HDAC6-232ENST00000489053 MP68P56378 58 aa4.22□□□□□ -1.73
HDAC6-232ENST00000489053 MACF1Q9UPN3 7388 aaKnown RBP4.2□□□□□ -1.74
HDAC6-232ENST00000489053 A0A087WVE0 104 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms