RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 BAALC-AS2P0C853 105 aa6.74□□□□□ -1.33
CHMP3-208ENST00000486404 LINC00313P59037 77 aa6.74□□□□□ -1.33
CHMP3-208ENST00000486404 NAA38Q9BRA0 125 aaKnown RBP6.74□□□□□ -1.33
CHMP3-208ENST00000486404 TSTD3H0UI37 97 aa6.73□□□□□ -1.33
CHMP3-208ENST00000486404 DEFB116Q30KQ4 102 aa6.73□□□□□ -1.33
CHMP3-208ENST00000486404 LYRM7Q5U5X0 104 aa6.73□□□□□ -1.33
CHMP3-208ENST00000486404 IGHV6-1A0A0B4J1U7 121 aa6.72□□□□□ -1.33
CHMP3-208ENST00000486404 C9JAW5 83 aa6.72□□□□□ -1.33
CHMP3-208ENST00000486404 BATFQ16520 125 aa6.71□□□□□ -1.34
CHMP3-208ENST00000486404 LINC00472Q9H8W2 130 aa6.71□□□□□ -1.34
CHMP3-208ENST00000486404 JMJD7-PLA2G4BH0Y9G9 81 aa6.69□□□□□ -1.34
CHMP3-208ENST00000486404 TRBV20-1A0A075B6N2 111 aa6.68□□□□□ -1.34
CHMP3-208ENST00000486404 KRTAP4-8A0A0G2JLE6 195 aa6.68□□□□□ -1.34
CHMP3-208ENST00000486404 A0A1B0GVX0 72 aa6.66□□□□□ -1.34
CHMP3-208ENST00000486404 KRTAP16-1A8MUX0 517 aa6.66□□□□□ -1.34
CHMP3-208ENST00000486404 C8orf87E5RJ46 101 aa6.66□□□□□ -1.34
CHMP3-208ENST00000486404 J3KT08 172 aa6.66□□□□□ -1.34
CHMP3-208ENST00000486404 LOC110117498A0A087WWA1 95 aa6.64□□□□□ -1.35
CHMP3-208ENST00000486404 PDE6GP18545 87 aa6.64□□□□□ -1.35
CHMP3-208ENST00000486404 KRTAP10-6P60371 365 aaPredicted RBP6.64□□□□□ -1.35
CHMP3-208ENST00000486404 Q6ZQT0 140 aa6.64□□□□□ -1.35
CHMP3-208ENST00000486404 NOTCH2NLQ7Z3S9 236 aa6.64□□□□□ -1.35
CHMP3-208ENST00000486404 C14orf132Q9NPU4 83 aa6.63□□□□□ -1.35
CHMP3-208ENST00000486404 NDUFB1O75438 58 aa6.62□□□□□ -1.35
CHMP3-208ENST00000486404 A0A1B0GW54 56 aa6.61□□□□□ -1.35
CHMP3-208ENST00000486404 FAM236DA0A1B0GTK5 79 aa6.6□□□□□ -1.35
CHMP3-208ENST00000486404 LOC105371267A0A1B0GV96 52 aa6.6□□□□□ -1.35
CHMP3-208ENST00000486404 FAM236CP0DP71 79 aa6.6□□□□□ -1.35
CHMP3-208ENST00000486404 FLGP20930 4061 aaPredicted RBP6.6□□□□□ -1.35
CHMP3-208ENST00000486404 C9orf118A6NHY6 69 aa6.57□□□□□ -1.36
CHMP3-208ENST00000486404 A8MWP4 228 aa6.57□□□□□ -1.36
CHMP3-208ENST00000486404 RBM12B-AS1Q9P1G2 102 aa6.57□□□□□ -1.36
CHMP3-208ENST00000486404 A0A1W2PPM0 123 aa6.56□□□□□ -1.36
CHMP3-208ENST00000486404 H3BT86 120 aa6.56□□□□□ -1.36
CHMP3-208ENST00000486404 TAX1BP3O14907 124 aa6.54□□□□□ -1.36
CHMP3-208ENST00000486404 NREPQ16612 68 aa6.54□□□□□ -1.36
CHMP3-208ENST00000486404 MTURNQ8N3F0 131 aa6.54□□□□□ -1.36
CHMP3-208ENST00000486404 ZCCHC13Q8WW36 166 aaKnown RBP6.54□□□□□ -1.36
CHMP3-208ENST00000486404 C8orf17Q9NRJ1 99 aa6.54□□□□□ -1.36
CHMP3-208ENST00000486404 IGKV3D-7A0A0C4DH55 119 aa6.51□□□□□ -1.37
CHMP3-208ENST00000486404 HRES1P13985 223 aa6.51□□□□□ -1.37
CHMP3-208ENST00000486404 Q6ZVQ6 151 aa6.5□□□□□ -1.37
CHMP3-208ENST00000486404 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
CHMP3-208ENST00000486404 Q8N9P0 234 aaPredicted RBP6.49□□□□□ -1.37
CHMP3-208ENST00000486404 SPCS1Q9Y6A9 102 aa6.49□□□□□ -1.37
CHMP3-208ENST00000486404 LCE1DQ5T752 114 aa6.48□□□□□ -1.37
CHMP3-208ENST00000486404 PRR15Q8IV56 129 aa6.48□□□□□ -1.37
CHMP3-208ENST00000486404 CRCT1Q9UGL9 99 aa6.48□□□□□ -1.37
CHMP3-208ENST00000486404 MPLKIPQ8TAP9 179 aa6.46□□□□□ -1.38
CHMP3-208ENST00000486404 KRTAP4-7Q9BYR0 210 aa6.46□□□□□ -1.38
CHMP3-208ENST00000486404 SPINK7P58062 85 aa6.45□□□□□ -1.38
CHMP3-208ENST00000486404 TMEM254Q8TBM7 123 aa6.45□□□□□ -1.38
CHMP3-208ENST00000486404 MMP24-AS1A0A0U1RRL7 71 aa6.44□□□□□ -1.38
CHMP3-208ENST00000486404 K7EQZ3 153 aa6.44□□□□□ -1.38
CHMP3-208ENST00000486404 BPY2O14599 106 aa6.44□□□□□ -1.38
CHMP3-208ENST00000486404 COL5A1-AS1Q5SY13 56 aa6.44□□□□□ -1.38
CHMP3-208ENST00000486404 NDUFS5O43920 106 aa6.43□□□□□ -1.38
CHMP3-208ENST00000486404 MRPL34Q9BQ48 92 aaKnown RBP6.43□□□□□ -1.38
CHMP3-208ENST00000486404 hDV103S1A0JD37 113 aa6.42□□□□□ -1.38
CHMP3-208ENST00000486404 WFDC13Q8IUB5 93 aa6.42□□□□□ -1.38
CHMP3-208ENST00000486404 FSIP2Q5CZC0 6907 aa6.4□□□□□ -1.38
CHMP3-208ENST00000486404 K7EP34 96 aa6.37□□□□□ -1.39
CHMP3-208ENST00000486404 KRTAP9-8Q9BYQ0 159 aa6.37□□□□□ -1.39
CHMP3-208ENST00000486404 Q8N9L7 120 aa6.35□□□□□ -1.39
CHMP3-208ENST00000486404 UBL5Q9BZL1 73 aa6.35□□□□□ -1.39
CHMP3-208ENST00000486404 CASC2Q6XLA1 102 aa6.34□□□□□ -1.39
CHMP3-208ENST00000486404 PRO0461Q9UI25 63 aa6.33□□□□□ -1.4
CHMP3-208ENST00000486404 MT2AP02795 61 aa6.32□□□□□ -1.4
CHMP3-208ENST00000486404 GTF2H5Q6ZYL4 71 aa6.32□□□□□ -1.4
CHMP3-208ENST00000486404 IGKV2D-30A0A075B6S6 120 aa6.31□□□□□ -1.4
CHMP3-208ENST00000486404 IGKV2-30P06310 120 aa6.31□□□□□ -1.4
CHMP3-208ENST00000486404 KRTAP4-9Q9BYQ8 210 aa6.31□□□□□ -1.4
CHMP3-208ENST00000486404 PCP4L1A6NKN8 68 aa6.3□□□□□ -1.4
CHMP3-208ENST00000486404 HCG22E2RYF7 251 aa6.3□□□□□ -1.4
CHMP3-208ENST00000486404 C7orf65Q6ZTY9 151 aa6.3□□□□□ -1.4
CHMP3-208ENST00000486404 LINC00846Q9NV44 126 aa6.3□□□□□ -1.4
CHMP3-208ENST00000486404 KRTAP10-10P60014 251 aa6.29□□□□□ -1.4
CHMP3-208ENST00000486404 MT1FP04733 61 aa6.28□□□□□ -1.4
CHMP3-208ENST00000486404 CXCL6P80162 114 aa6.26□□□□□ -1.41
CHMP3-208ENST00000486404 Q5W150 140 aa6.25□□□□□ -1.41
CHMP3-208ENST00000486404 F8W1H4 67 aa6.24□□□□□ -1.41
CHMP3-208ENST00000486404 H1FX-AS1Q4G0G2 97 aa6.24□□□□□ -1.41
CHMP3-208ENST00000486404 ETDBQ3ZM63 59 aa6.22□□□□□ -1.41
CHMP3-208ENST00000486404 LCE4AQ5TA78 99 aa6.22□□□□□ -1.41
CHMP3-208ENST00000486404 USH2AO75445 5202 aa6.2□□□□□ -1.42
CHMP3-208ENST00000486404 KRTAP4-2Q9BYR5 136 aa6.19□□□□□ -1.42
CHMP3-208ENST00000486404 C4orf26Q17RF5 130 aa6.17□□□□□ -1.42
CHMP3-208ENST00000486404 KRTAP9-3Q9BYQ3 159 aa6.17□□□□□ -1.42
CHMP3-208ENST00000486404 TP53AIP1Q9HCN2 124 aa6.15□□□□□ -1.42
CHMP3-208ENST00000486404 SSPOA2VEC9 5147 aa6.13□□□□□ -1.43
CHMP3-208ENST00000486404 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
CHMP3-208ENST00000486404 KRTAP3-1Q9BYR8 98 aa6.11□□□□□ -1.43
CHMP3-208ENST00000486404 ACYP1P07311 99 aa6.1□□□□□ -1.43
CHMP3-208ENST00000486404 ATP5EP2Q5VTU8 51 aa6.08□□□□□ -1.44
CHMP3-208ENST00000486404 KRTAP4-11Q9BYQ6 195 aa6.07□□□□□ -1.44
CHMP3-208ENST00000486404 S4R3F8 94 aa6.07□□□□□ -1.44
CHMP3-208ENST00000486404 FAM240AA0A1B0GVK7 77 aa6.06□□□□□ -1.44
CHMP3-208ENST00000486404 KRTAP9-7A8MTY7 169 aa6.06□□□□□ -1.44
CHMP3-208ENST00000486404 C1orf64Q8NEQ6 169 aa6.06□□□□□ -1.44
CHMP3-208ENST00000486404 C5orf47Q569G3 176 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms