RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 NOTCH2NLQ7Z3S9 236 aa10.13□□□□□ -0.79
SNX5-213ENST00000486039 PCP4L1A6NKN8 68 aa10.12□□□□□ -0.79
SNX5-213ENST00000486039 KRTAP16-1A8MUX0 517 aa10.12□□□□□ -0.79
SNX5-213ENST00000486039 M0R2T5 61 aa10.1□□□□□ -0.79
SNX5-213ENST00000486039 FLGP20930 4061 aaPredicted RBP10.09□□□□□ -0.79
SNX5-213ENST00000486039 C9JAW5 83 aa10.09□□□□□ -0.79
SNX5-213ENST00000486039 IGHV6-1A0A0B4J1U7 121 aa10.06□□□□□ -0.8
SNX5-213ENST00000486039 JMJD7-PLA2G4BH0Y9G9 81 aa10.03□□□□□ -0.8
SNX5-213ENST00000486039 Q6ZQT0 140 aa10.03□□□□□ -0.8
SNX5-213ENST00000486039 SPCS1Q9Y6A9 102 aa10.03□□□□□ -0.8
SNX5-213ENST00000486039 A0A1B0GVX0 72 aa10.01□□□□□ -0.81
SNX5-213ENST00000486039 C21orf62-AS1Q17RA5 79 aa10.01□□□□□ -0.81
SNX5-213ENST00000486039 H3BT86 120 aa10□□□□□ -0.81
SNX5-213ENST00000486039 LOC110117498A0A087WWA1 95 aa9.99□□□□□ -0.81
SNX5-213ENST00000486039 C8orf87E5RJ46 101 aa9.98□□□□□ -0.81
SNX5-213ENST00000486039 J3KT08 172 aa9.97□□□□□ -0.81
SNX5-213ENST00000486039 C14orf132Q9NPU4 83 aa9.96□□□□□ -0.82
SNX5-213ENST00000486039 PDE6GP18545 87 aa9.95□□□□□ -0.82
SNX5-213ENST00000486039 A0A1B0GW54 56 aa9.94□□□□□ -0.82
SNX5-213ENST00000486039 MTURNQ8N3F0 131 aa9.94□□□□□ -0.82
SNX5-213ENST00000486039 K7EP34 96 aa9.93□□□□□ -0.82
SNX5-213ENST00000486039 GTF2H5Q6ZYL4 71 aa9.89□□□□□ -0.83
SNX5-213ENST00000486039 NDUFB1O75438 58 aa9.88□□□□□ -0.83
SNX5-213ENST00000486039 A8MWP4 228 aa9.87□□□□□ -0.83
SNX5-213ENST00000486039 HRES1P13985 223 aa9.87□□□□□ -0.83
SNX5-213ENST00000486039 IGKV3D-7A0A0C4DH55 119 aa9.85□□□□□ -0.83
SNX5-213ENST00000486039 MPLKIPQ8TAP9 179 aa9.85□□□□□ -0.83
SNX5-213ENST00000486039 C8orf17Q9NRJ1 99 aa9.85□□□□□ -0.83
SNX5-213ENST00000486039 Q8N9P0 234 aaPredicted RBP9.83□□□□□ -0.84
SNX5-213ENST00000486039 ZCCHC13Q8WW36 166 aaKnown RBP9.83□□□□□ -0.84
SNX5-213ENST00000486039 SMCPP49901 116 aaPredicted RBP9.82□□□□□ -0.84
SNX5-213ENST00000486039 NREPQ16612 68 aa9.82□□□□□ -0.84
SNX5-213ENST00000486039 PRO0461Q9UI25 63 aa9.82□□□□□ -0.84
SNX5-213ENST00000486039 FAM236DA0A1B0GTK5 79 aa9.79□□□□□ -0.84
SNX5-213ENST00000486039 FAM236CP0DP71 79 aa9.79□□□□□ -0.84
SNX5-213ENST00000486039 PRR15Q8IV56 129 aa9.79□□□□□ -0.84
SNX5-213ENST00000486039 RBM12B-AS1Q9P1G2 102 aa9.78□□□□□ -0.84
SNX5-213ENST00000486039 F8W1H4 67 aa9.76□□□□□ -0.85
SNX5-213ENST00000486039 Q6ZVQ6 151 aa9.75□□□□□ -0.85
SNX5-213ENST00000486039 KRTAP9-8Q9BYQ0 159 aa9.75□□□□□ -0.85
SNX5-213ENST00000486039 SPINK7P58062 85 aa9.74□□□□□ -0.85
SNX5-213ENST00000486039 MMP24-AS1A0A0U1RRL7 71 aa9.72□□□□□ -0.85
SNX5-213ENST00000486039 USH2AO75445 5202 aa9.7□□□□□ -0.86
SNX5-213ENST00000486039 K7EQZ3 153 aa9.69□□□□□ -0.86
SNX5-213ENST00000486039 SSPOA2VEC9 5147 aa9.69□□□□□ -0.86
SNX5-213ENST00000486039 TMEM254Q8TBM7 123 aa9.68□□□□□ -0.86
SNX5-213ENST00000486039 MRPL34Q9BQ48 92 aaKnown RBP9.68□□□□□ -0.86
SNX5-213ENST00000486039 ETDBQ3ZM63 59 aa9.65□□□□□ -0.86
SNX5-213ENST00000486039 hDV103S1A0JD37 113 aa9.64□□□□□ -0.87
SNX5-213ENST00000486039 BPY2O14599 106 aa9.64□□□□□ -0.87
SNX5-213ENST00000486039 MT2AP02795 61 aa9.6□□□□□ -0.87
SNX5-213ENST00000486039 WFDC13Q8IUB5 93 aa9.59□□□□□ -0.87
SNX5-213ENST00000486039 UBL5Q9BZL1 73 aa9.58□□□□□ -0.88
SNX5-213ENST00000486039 A0A1B0GV90 55 aa9.57□□□□□ -0.88
SNX5-213ENST00000486039 NDUFS5O43920 106 aa9.57□□□□□ -0.88
SNX5-213ENST00000486039 Q8N9L7 120 aa9.57□□□□□ -0.88
SNX5-213ENST00000486039 LINC00846Q9NV44 126 aa9.55□□□□□ -0.88
SNX5-213ENST00000486039 MT1FP04733 61 aa9.54□□□□□ -0.88
SNX5-213ENST00000486039 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.53□□□□□ -0.88
SNX5-213ENST00000486039 Q5W150 140 aa9.51□□□□□ -0.89
SNX5-213ENST00000486039 CASC2Q6XLA1 102 aa9.49□□□□□ -0.89
SNX5-213ENST00000486039 KRTAP9-7A8MTY7 169 aa9.47□□□□□ -0.89
SNX5-213ENST00000486039 HCG22E2RYF7 251 aa9.46□□□□□ -0.9
SNX5-213ENST00000486039 KRTAP10-10P60014 251 aa9.46□□□□□ -0.9
SNX5-213ENST00000486039 ACYP1P07311 99 aa9.45□□□□□ -0.9
SNX5-213ENST00000486039 IGKV2D-30A0A075B6S6 120 aa9.44□□□□□ -0.9
SNX5-213ENST00000486039 IGKV2-30P06310 120 aa9.44□□□□□ -0.9
SNX5-213ENST00000486039 KRTAP9-3Q9BYQ3 159 aa9.44□□□□□ -0.9
SNX5-213ENST00000486039 FCGBPQ9Y6R7 5405 aaPredicted RBP9.43□□□□□ -0.9
SNX5-213ENST00000486039 FAM240AA0A1B0GVK7 77 aa9.43□□□□□ -0.9
SNX5-213ENST00000486039 LCE2BO14633 110 aa9.43□□□□□ -0.9
SNX5-213ENST00000486039 C7orf65Q6ZTY9 151 aa9.4□□□□□ -0.9
SNX5-213ENST00000486039 CXCL6P80162 114 aa9.39□□□□□ -0.91
SNX5-213ENST00000486039 H1FX-AS1Q4G0G2 97 aa9.38□□□□□ -0.91
SNX5-213ENST00000486039 KRTAP19-1Q8IUB9 90 aa9.36□□□□□ -0.91
SNX5-213ENST00000486039 ATP5EP2Q5VTU8 51 aa9.31□□□□□ -0.92
SNX5-213ENST00000486039 J3QR89 54 aa9.29□□□□□ -0.92
SNX5-213ENST00000486039 C4orf26Q17RF5 130 aa9.28□□□□□ -0.92
SNX5-213ENST00000486039 LINC00643Q86TS7 51 aa9.23□□□□□ -0.93
SNX5-213ENST00000486039 TP53AIP1Q9HCN2 124 aa9.2□□□□□ -0.94
SNX5-213ENST00000486039 KRTAP3-1Q9BYR8 98 aa9.19□□□□□ -0.94
SNX5-213ENST00000486039 HIST1H4AP62805 103 aaKnown RBP9.18□□□□□ -0.94
SNX5-213ENST00000486039 KRTAP19-6Q3LI70 58 aa9.14□□□□□ -0.95
SNX5-213ENST00000486039 MACF1Q9UPN3 7388 aaKnown RBP9.13□□□□□ -0.95
SNX5-213ENST00000486039 C1orf64Q8NEQ6 169 aa9.11□□□□□ -0.95
SNX5-213ENST00000486039 SYNE2Q8WXH0 6885 aaKnown RBP9.09□□□□□ -0.95
SNX5-213ENST00000486039 C5orf47Q569G3 176 aa9.08□□□□□ -0.96
SNX5-213ENST00000486039 K7ERU9 68 aa9.07□□□□□ -0.96
SNX5-213ENST00000486039 S4R3F8 94 aa9.06□□□□□ -0.96
SNX5-213ENST00000486039 A0A087WVE0 104 aa9.05□□□□□ -0.96
SNX5-213ENST00000486039 CYP4F30PQ9H0H9 118 aa9.04□□□□□ -0.96
SNX5-213ENST00000486039 LCA10Q71F78 164 aa9.02□□□□□ -0.97
SNX5-213ENST00000486039 TRAV22A0A0B4J277 110 aa9.01□□□□□ -0.97
SNX5-213ENST00000486039 CSAG1Q6PB30 78 aa8.98□□□□□ -0.97
SNX5-213ENST00000486039 UQCRQO14949 82 aa8.97□□□□□ -0.97
SNX5-213ENST00000486039 LOC101927531A0A1B0GV80 90 aa8.96□□□□□ -0.98
SNX5-213ENST00000486039 FAM236AA0A1B0GUQ0 79 aa8.93□□□□□ -0.98
SNX5-213ENST00000486039 FAM236BA0A1B0GV22 79 aa8.93□□□□□ -0.98
SNX5-213ENST00000486039 KRTAP3-3Q9BYR6 98 aa8.93□□□□□ -0.98
SNX5-213ENST00000486039 ATOX1O00244 68 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms