RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 A0A1B0GVX0 72 aa8.65□□□□□ -1.02
APOE-205ENST00000485628 BPY2O14599 106 aa8.65□□□□□ -1.02
APOE-205ENST00000485628 NOTCH2NLQ7Z3S9 236 aa8.65□□□□□ -1.02
APOE-205ENST00000485628 PRR15Q8IV56 129 aa8.64□□□□□ -1.03
APOE-205ENST00000485628 CXCL6P80162 114 aa8.62□□□□□ -1.03
APOE-205ENST00000485628 XP32Q5T750 250 aa8.62□□□□□ -1.03
APOE-205ENST00000485628 KRTAP16-1A8MUX0 517 aa8.61□□□□□ -1.03
APOE-205ENST00000485628 CDIP1Q9H305 208 aa8.61□□□□□ -1.03
APOE-205ENST00000485628 C9orf92A6NGG3 77 aa8.6□□□□□ -1.03
APOE-205ENST00000485628 K7EQZ3 153 aa8.6□□□□□ -1.03
APOE-205ENST00000485628 NDUFB1O75438 58 aa8.6□□□□□ -1.03
APOE-205ENST00000485628 IGHV6-1A0A0B4J1U7 121 aa8.59□□□□□ -1.03
APOE-205ENST00000485628 C8orf87E5RJ46 101 aa8.59□□□□□ -1.03
APOE-205ENST00000485628 K7ERU9 68 aa8.59□□□□□ -1.03
APOE-205ENST00000485628 LINC00313P59037 77 aa8.59□□□□□ -1.03
APOE-205ENST00000485628 LINC00643Q86TS7 51 aa8.58□□□□□ -1.04
APOE-205ENST00000485628 ATP5EP2Q5VTU8 51 aa8.56□□□□□ -1.04
APOE-205ENST00000485628 C8orf17Q9NRJ1 99 aa8.56□□□□□ -1.04
APOE-205ENST00000485628 MMP24-AS1A0A0U1RRL7 71 aa8.55□□□□□ -1.04
APOE-205ENST00000485628 Q8N9L7 120 aa8.55□□□□□ -1.04
APOE-205ENST00000485628 C20orf166-AS1Q96NR2 134 aa8.55□□□□□ -1.04
APOE-205ENST00000485628 A8MUU9 505 aa8.53□□□□□ -1.04
APOE-205ENST00000485628 Q75L30 129 aa8.52□□□□□ -1.05
APOE-205ENST00000485628 RPL37P61927 97 aaKnown RBP8.5□□□□□ -1.05
APOE-205ENST00000485628 Q8N9P0 234 aaPredicted RBP8.5□□□□□ -1.05
APOE-205ENST00000485628 MUC17Q685J3 4493 aa8.48□□□□□ -1.05
APOE-205ENST00000485628 TMEM254Q8TBM7 123 aa8.47□□□□□ -1.05
APOE-205ENST00000485628 hDV103S1A0JD37 113 aa8.46□□□□□ -1.06
APOE-205ENST00000485628 HCG22E2RYF7 251 aa8.44□□□□□ -1.06
APOE-205ENST00000485628 MRPL34Q9BQ48 92 aaKnown RBP8.44□□□□□ -1.06
APOE-205ENST00000485628 UBR4Q5T4S7 5183 aa8.41□□□□□ -1.06
APOE-205ENST00000485628 CASC2Q6XLA1 102 aa8.41□□□□□ -1.06
APOE-205ENST00000485628 SEC61BP60468 96 aaKnown RBP8.4□□□□□ -1.06
APOE-205ENST00000485628 WFDC13Q8IUB5 93 aa8.4□□□□□ -1.06
APOE-205ENST00000485628 MT-ATP8P03928 68 aa8.39□□□□□ -1.07
APOE-205ENST00000485628 IMUPQ9GZP8 106 aa8.38□□□□□ -1.07
APOE-205ENST00000485628 HIST1H4AP62805 103 aaKnown RBP8.37□□□□□ -1.07
APOE-205ENST00000485628 PCOTHQ58A44 107 aa8.37□□□□□ -1.07
APOE-205ENST00000485628 A0A087WVE0 104 aa8.36□□□□□ -1.07
APOE-205ENST00000485628 KRTAP4-1Q9BYQ7 146 aa8.36□□□□□ -1.07
APOE-205ENST00000485628 ATP11AUNQ6ZP68 121 aa8.33□□□□□ -1.08
APOE-205ENST00000485628 ZCCHC13Q8WW36 166 aaKnown RBP8.32□□□□□ -1.08
APOE-205ENST00000485628 Q5W150 140 aa8.29□□□□□ -1.08
APOE-205ENST00000485628 TP53AIP1Q9HCN2 124 aa8.26□□□□□ -1.09
APOE-205ENST00000485628 MUC2Q02817 5179 aa8.25□□□□□ -1.09
APOE-205ENST00000485628 RNF213Q63HN8 5207 aa8.25□□□□□ -1.09
APOE-205ENST00000485628 NDUFS5O43920 106 aa8.24□□□□□ -1.09
APOE-205ENST00000485628 OCR1Q9BZK8 76 aa8.22□□□□□ -1.09
APOE-205ENST00000485628 UQCRQO14949 82 aa8.17□□□□□ -1.1
APOE-205ENST00000485628 FAM236AA0A1B0GUQ0 79 aa8.15□□□□□ -1.1
APOE-205ENST00000485628 FAM236BA0A1B0GV22 79 aa8.15□□□□□ -1.1
APOE-205ENST00000485628 SPINK7P58062 85 aa8.15□□□□□ -1.1
APOE-205ENST00000485628 KRTAP19-2Q3LHN2 52 aa8.15□□□□□ -1.1
APOE-205ENST00000485628 HRES1P13985 223 aa8.13□□□□□ -1.11
APOE-205ENST00000485628 MPLKIPQ8TAP9 179 aa8.13□□□□□ -1.11
APOE-205ENST00000485628 TRAV22A0A0B4J277 110 aa8.12□□□□□ -1.11
APOE-205ENST00000485628 IGKV2-30P06310 120 aa8.1□□□□□ -1.11
APOE-205ENST00000485628 SCGB1A1P11684 91 aa8.09□□□□□ -1.11
APOE-205ENST00000485628 LCE2CQ5TA81 110 aa8.07□□□□□ -1.12
APOE-205ENST00000485628 C7orf65Q6ZTY9 151 aa8.07□□□□□ -1.12
APOE-205ENST00000485628 C5orf47Q569G3 176 aa8.06□□□□□ -1.12
APOE-205ENST00000485628 SMIM20Q8N5G0 67 aa8.06□□□□□ -1.12
APOE-205ENST00000485628 TRAV7A0A075B6U4 112 aa8.05□□□□□ -1.12
APOE-205ENST00000485628 H0Y9P7 68 aa8.05□□□□□ -1.12
APOE-205ENST00000485628 ATOX1O00244 68 aa8.05□□□□□ -1.12
APOE-205ENST00000485628 IGKV2D-30A0A075B6S6 120 aa8.03□□□□□ -1.12
APOE-205ENST00000485628 CYP4F30PQ9H0H9 118 aa8.03□□□□□ -1.12
APOE-205ENST00000485628 FAT4Q6V0I7 4981 aa8.03□□□□□ -1.12
APOE-205ENST00000485628 LOC101927531A0A1B0GV80 90 aa8.02□□□□□ -1.13
APOE-205ENST00000485628 H3BPC8 53 aa8□□□□□ -1.13
APOE-205ENST00000485628 MP68P56378 58 aa7.97□□□□□ -1.13
APOE-205ENST00000485628 SERP2Q8N6R1 65 aa7.97□□□□□ -1.13
APOE-205ENST00000485628 C1orf64Q8NEQ6 169 aa7.97□□□□□ -1.13
APOE-205ENST00000485628 LINC00208Q96KT6 92 aa7.97□□□□□ -1.13
APOE-205ENST00000485628 RBM12B-AS1Q9P1G2 102 aa7.93□□□□□ -1.14
APOE-205ENST00000485628 A0A0U1RQV1 116 aa7.92□□□□□ -1.14
APOE-205ENST00000485628 FLGP20930 4061 aaPredicted RBP7.92□□□□□ -1.14
APOE-205ENST00000485628 KLKP1Q107X0 134 aa7.91□□□□□ -1.14
APOE-205ENST00000485628 LCE2AQ5TA79 106 aaPredicted RBP7.91□□□□□ -1.14
APOE-205ENST00000485628 KRTAP3-1Q9BYR8 98 aa7.91□□□□□ -1.14
APOE-205ENST00000485628 C4orf26Q17RF5 130 aa7.89□□□□□ -1.15
APOE-205ENST00000485628 COX6B2Q6YFQ2 88 aa7.89□□□□□ -1.15
APOE-205ENST00000485628 COX7CP15954 63 aa7.87□□□□□ -1.15
APOE-205ENST00000485628 MT1HP80294 61 aa7.87□□□□□ -1.15
APOE-205ENST00000485628 H1FX-AS1Q4G0G2 97 aa7.81□□□□□ -1.16
APOE-205ENST00000485628 C20orf197Q8N268 126 aa7.81□□□□□ -1.16
APOE-205ENST00000485628 FAM236DA0A1B0GTK5 79 aa7.8□□□□□ -1.16
APOE-205ENST00000485628 FAM236CP0DP71 79 aa7.8□□□□□ -1.16
APOE-205ENST00000485628 ANAPC13Q9BS18 74 aa7.8□□□□□ -1.16
APOE-205ENST00000485628 SNURFQ9Y675 71 aa7.79□□□□□ -1.16
APOE-205ENST00000485628 A8MUN3 132 aa7.72□□□□□ -1.17
APOE-205ENST00000485628 CYSTM1Q9H1C7 97 aa7.72□□□□□ -1.17
APOE-205ENST00000485628 DMAC1Q96GE9 116 aa7.7□□□□□ -1.18
APOE-205ENST00000485628 SPANXA2-OT1Q8N9U9 137 aa7.69□□□□□ -1.18
APOE-205ENST00000485628 CCDC179H3BU77 68 aa7.67□□□□□ -1.18
APOE-205ENST00000485628 H7BZZ5 65 aa7.67□□□□□ -1.18
APOE-205ENST00000485628 KRTAP3-3Q9BYR6 98 aa7.66□□□□□ -1.18
APOE-205ENST00000485628 NDUFC1O43677 76 aa7.65□□□□□ -1.18
APOE-205ENST00000485628 LORP23490 312 aaPredicted RBP7.64□□□□□ -1.19
APOE-205ENST00000485628 KRTAP10-6P60371 365 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms