RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 TSTD3H0UI37 97 aa6.38□□□□□ -1.39
MSH5-216ENST00000484309 LINC00313P59037 77 aa6.38□□□□□ -1.39
MSH5-216ENST00000484309 IGHV6-1A0A0B4J1U7 121 aa6.37□□□□□ -1.39
MSH5-216ENST00000484309 C9JAW5 83 aa6.37□□□□□ -1.39
MSH5-216ENST00000484309 KRTAP16-1A8MUX0 517 aa6.36□□□□□ -1.39
MSH5-216ENST00000484309 M0R2T5 61 aa6.36□□□□□ -1.39
MSH5-216ENST00000484309 FLGP20930 4061 aaPredicted RBP6.35□□□□□ -1.39
MSH5-216ENST00000484309 A0A1B0GV90 55 aa6.34□□□□□ -1.39
MSH5-216ENST00000484309 A0A1B0GVX0 72 aa6.32□□□□□ -1.4
MSH5-216ENST00000484309 KRTAP10-6P60371 365 aaPredicted RBP6.32□□□□□ -1.4
MSH5-216ENST00000484309 Q6ZQT0 140 aa6.32□□□□□ -1.4
MSH5-216ENST00000484309 C14orf132Q9NPU4 83 aa6.32□□□□□ -1.4
MSH5-216ENST00000484309 JMJD7-PLA2G4BH0Y9G9 81 aa6.31□□□□□ -1.4
MSH5-216ENST00000484309 LYRM7Q5U5X0 104 aa6.31□□□□□ -1.4
MSH5-216ENST00000484309 LOC110117498A0A087WWA1 95 aa6.29□□□□□ -1.4
MSH5-216ENST00000484309 TRBV20-1A0A075B6N2 111 aa6.28□□□□□ -1.4
MSH5-216ENST00000484309 C8orf87E5RJ46 101 aa6.28□□□□□ -1.4
MSH5-216ENST00000484309 MTURNQ8N3F0 131 aa6.28□□□□□ -1.4
MSH5-216ENST00000484309 C9orf118A6NHY6 69 aa6.27□□□□□ -1.41
MSH5-216ENST00000484309 J3KT08 172 aa6.27□□□□□ -1.41
MSH5-216ENST00000484309 TAX1BP3O14907 124 aa6.27□□□□□ -1.41
MSH5-216ENST00000484309 KRTAP9-6A0A140TA67 174 aa6.26□□□□□ -1.41
MSH5-216ENST00000484309 A0A1W2PPM0 123 aa6.25□□□□□ -1.41
MSH5-216ENST00000484309 PDE6GP18545 87 aa6.24□□□□□ -1.41
MSH5-216ENST00000484309 NDUFB1O75438 58 aa6.23□□□□□ -1.41
MSH5-216ENST00000484309 FAM236DA0A1B0GTK5 79 aa6.22□□□□□ -1.41
MSH5-216ENST00000484309 FAM236CP0DP71 79 aa6.22□□□□□ -1.41
MSH5-216ENST00000484309 IGKV3D-7A0A0C4DH55 119 aa6.21□□□□□ -1.42
MSH5-216ENST00000484309 A0A1B0GW54 56 aa6.21□□□□□ -1.42
MSH5-216ENST00000484309 A8MWP4 228 aa6.21□□□□□ -1.42
MSH5-216ENST00000484309 H3BT86 120 aa6.21□□□□□ -1.42
MSH5-216ENST00000484309 HRES1P13985 223 aa6.21□□□□□ -1.42
MSH5-216ENST00000484309 C8orf17Q9NRJ1 99 aa6.21□□□□□ -1.42
MSH5-216ENST00000484309 NREPQ16612 68 aa6.2□□□□□ -1.42
MSH5-216ENST00000484309 ZCCHC13Q8WW36 166 aaKnown RBP6.2□□□□□ -1.42
MSH5-216ENST00000484309 SPCS1Q9Y6A9 102 aa6.17□□□□□ -1.42
MSH5-216ENST00000484309 FSIP2Q5CZC0 6907 aa6.16□□□□□ -1.42
MSH5-216ENST00000484309 PRR15Q8IV56 129 aa6.16□□□□□ -1.42
MSH5-216ENST00000484309 Q8N9P0 234 aaPredicted RBP6.16□□□□□ -1.42
MSH5-216ENST00000484309 MPLKIPQ8TAP9 179 aa6.16□□□□□ -1.42
MSH5-216ENST00000484309 RBM12B-AS1Q9P1G2 102 aa6.16□□□□□ -1.42
MSH5-216ENST00000484309 Q6ZVQ6 151 aa6.15□□□□□ -1.42
MSH5-216ENST00000484309 MMP24-AS1A0A0U1RRL7 71 aa6.14□□□□□ -1.43
MSH5-216ENST00000484309 CRCT1Q9UGL9 99 aa6.14□□□□□ -1.43
MSH5-216ENST00000484309 K7EQZ3 153 aa6.13□□□□□ -1.43
MSH5-216ENST00000484309 SPINK7P58062 85 aa6.13□□□□□ -1.43
MSH5-216ENST00000484309 COL5A1-AS1Q5SY13 56 aa6.11□□□□□ -1.43
MSH5-216ENST00000484309 TMEM254Q8TBM7 123 aa6.1□□□□□ -1.43
MSH5-216ENST00000484309 MRPL34Q9BQ48 92 aaKnown RBP6.1□□□□□ -1.43
MSH5-216ENST00000484309 BPY2O14599 106 aa6.09□□□□□ -1.43
MSH5-216ENST00000484309 KRTAP9-8Q9BYQ0 159 aa6.09□□□□□ -1.43
MSH5-216ENST00000484309 hDV103S1A0JD37 113 aa6.08□□□□□ -1.44
MSH5-216ENST00000484309 NDUFS5O43920 106 aa6.08□□□□□ -1.44
MSH5-216ENST00000484309 Q8N9L7 120 aa6.08□□□□□ -1.44
MSH5-216ENST00000484309 K7EP34 96 aa6.07□□□□□ -1.44
MSH5-216ENST00000484309 WFDC13Q8IUB5 93 aa6.07□□□□□ -1.44
MSH5-216ENST00000484309 PRO0461Q9UI25 63 aa6.07□□□□□ -1.44
MSH5-216ENST00000484309 MT2AP02795 61 aa6.04□□□□□ -1.44
MSH5-216ENST00000484309 LINC00846Q9NV44 126 aa6.02□□□□□ -1.45
MSH5-216ENST00000484309 CASC2Q6XLA1 102 aa6.01□□□□□ -1.45
MSH5-216ENST00000484309 MT1FP04733 61 aa6□□□□□ -1.45
MSH5-216ENST00000484309 SCGB1A1P11684 91 aa6□□□□□ -1.45
MSH5-216ENST00000484309 IGKV2D-30A0A075B6S6 120 aa5.99□□□□□ -1.45
MSH5-216ENST00000484309 HCG22E2RYF7 251 aa5.99□□□□□ -1.45
MSH5-216ENST00000484309 IGKV2-30P06310 120 aa5.99□□□□□ -1.45
MSH5-216ENST00000484309 Q5W150 140 aa5.99□□□□□ -1.45
MSH5-216ENST00000484309 K7ERU9 68 aa5.98□□□□□ -1.45
MSH5-216ENST00000484309 GTF2H5Q6ZYL4 71 aa5.98□□□□□ -1.45
MSH5-216ENST00000484309 UBL5Q9BZL1 73 aa5.98□□□□□ -1.45
MSH5-216ENST00000484309 KRTAP4-8Q9BYQ9 185 aa5.97□□□□□ -1.45
MSH5-216ENST00000484309 KRTAP10-10P60014 251 aa5.96□□□□□ -1.46
MSH5-216ENST00000484309 USH2AO75445 5202 aa5.95□□□□□ -1.46
MSH5-216ENST00000484309 ETDBQ3ZM63 59 aa5.94□□□□□ -1.46
MSH5-216ENST00000484309 C7orf65Q6ZTY9 151 aa5.94□□□□□ -1.46
MSH5-216ENST00000484309 F8W1H4 67 aa5.92□□□□□ -1.46
MSH5-216ENST00000484309 CXCL6P80162 114 aa5.9□□□□□ -1.46
MSH5-216ENST00000484309 H1FX-AS1Q4G0G2 97 aa5.9□□□□□ -1.46
MSH5-216ENST00000484309 KRTAP9-3Q9BYQ3 159 aa5.9□□□□□ -1.46
MSH5-216ENST00000484309 SSPOA2VEC9 5147 aa5.88□□□□□ -1.47
MSH5-216ENST00000484309 C4orf26Q17RF5 130 aa5.87□□□□□ -1.47
MSH5-216ENST00000484309 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.85□□□□□ -1.47
MSH5-216ENST00000484309 KRTAP19-1Q8IUB9 90 aa5.78□□□□□ -1.48
MSH5-216ENST00000484309 TP53AIP1Q9HCN2 124 aa5.78□□□□□ -1.48
MSH5-216ENST00000484309 KRTAP3-1Q9BYR8 98 aa5.77□□□□□ -1.49
MSH5-216ENST00000484309 J3QR89 54 aa5.76□□□□□ -1.49
MSH5-216ENST00000484309 ACYP1P07311 99 aa5.75□□□□□ -1.49
MSH5-216ENST00000484309 C5orf47Q569G3 176 aa5.75□□□□□ -1.49
MSH5-216ENST00000484309 C1orf64Q8NEQ6 169 aa5.75□□□□□ -1.49
MSH5-216ENST00000484309 HIST1H4AP62805 103 aaKnown RBP5.73□□□□□ -1.49
MSH5-216ENST00000484309 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
MSH5-216ENST00000484309 S4R3F8 94 aa5.73□□□□□ -1.49
MSH5-216ENST00000484309 FCGBPQ9Y6R7 5405 aaPredicted RBP5.73□□□□□ -1.49
MSH5-216ENST00000484309 FAM240AA0A1B0GVK7 77 aa5.72□□□□□ -1.49
MSH5-216ENST00000484309 ATP5EP2Q5VTU8 51 aa5.7□□□□□ -1.5
MSH5-216ENST00000484309 TRAV22A0A0B4J277 110 aa5.69□□□□□ -1.5
MSH5-216ENST00000484309 LCA10Q71F78 164 aa5.69□□□□□ -1.5
MSH5-216ENST00000484309 CYP4F30PQ9H0H9 118 aa5.69□□□□□ -1.5
MSH5-216ENST00000484309 A0A087WVE0 104 aa5.67□□□□□ -1.5
MSH5-216ENST00000484309 FAM236AA0A1B0GUQ0 79 aa5.67□□□□□ -1.5
MSH5-216ENST00000484309 FAM236BA0A1B0GV22 79 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms