RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 C14orf144Q96I85 54 aa9.67□□□□□ -0.86
VPS36-203ENST00000475375 LYRM7Q5U5X0 104 aa9.66□□□□□ -0.86
VPS36-203ENST00000475375 HIGD1BQ9P298 99 aa9.65□□□□□ -0.86
VPS36-203ENST00000475375 TMEM256-PLSCR3K7ERE1 68 aa9.64□□□□□ -0.87
VPS36-203ENST00000475375 TMEM238LA0A1B0GVL6 79 aa9.62□□□□□ -0.87
VPS36-203ENST00000475375 A6NJY4 79 aa9.62□□□□□ -0.87
VPS36-203ENST00000475375 CEND1Q8N111 149 aa9.61□□□□□ -0.87
VPS36-203ENST00000475375 J3KT08 172 aa9.59□□□□□ -0.87
VPS36-203ENST00000475375 S100A6P06703 90 aa9.59□□□□□ -0.87
VPS36-203ENST00000475375 PSMB2P49721 201 aa9.58□□□□□ -0.88
VPS36-203ENST00000475375 C2orf91Q6ZV80 131 aa9.58□□□□□ -0.88
VPS36-203ENST00000475375 PAM16Q9Y3D7 125 aa9.57□□□□□ -0.88
VPS36-203ENST00000475375 NDUFB1O75438 58 aa9.56□□□□□ -0.88
VPS36-203ENST00000475375 FXYD2P54710 66 aa9.55□□□□□ -0.88
VPS36-203ENST00000475375 SPATA45Q537H7 98 aa9.55□□□□□ -0.88
VPS36-203ENST00000475375 UBE2V1Q13404 147 aa9.54□□□□□ -0.88
VPS36-203ENST00000475375 H1FX-AS1Q4G0G2 97 aa9.53□□□□□ -0.88
VPS36-203ENST00000475375 DSCR8Q96T75 97 aa9.53□□□□□ -0.88
VPS36-203ENST00000475375 MUC12Q9UKN1 5478 aa9.53□□□□□ -0.88
VPS36-203ENST00000475375 RBM3P98179 157 aaKnown RBP9.52□□□□□ -0.89
VPS36-203ENST00000475375 COX6CP09669 75 aa9.51□□□□□ -0.89
VPS36-203ENST00000475375 C8orf17Q9NRJ1 99 aa9.5□□□□□ -0.89
VPS36-203ENST00000475375 IGKV3D-7A0A0C4DH55 119 aa9.48□□□□□ -0.89
VPS36-203ENST00000475375 KRTAP20-1Q3LI63 56 aa9.48□□□□□ -0.89
VPS36-203ENST00000475375 C21orf62-AS1Q17RA5 79 aa9.47□□□□□ -0.89
VPS36-203ENST00000475375 VAMP8Q9BV40 100 aa9.47□□□□□ -0.89
VPS36-203ENST00000475375 A6NN06 94 aa9.46□□□□□ -0.9
VPS36-203ENST00000475375 K7ERJ3 54 aa9.46□□□□□ -0.9
VPS36-203ENST00000475375 Q6ZQT0 140 aa9.45□□□□□ -0.9
VPS36-203ENST00000475375 C9JAW5 83 aa9.43□□□□□ -0.9
VPS36-203ENST00000475375 S100A1P23297 94 aa9.43□□□□□ -0.9
VPS36-203ENST00000475375 Q6ZVQ6 151 aa9.43□□□□□ -0.9
VPS36-203ENST00000475375 HSD52Q0P140 79 aa9.35□□□□□ -0.91
VPS36-203ENST00000475375 SCGB1C2P0DMR2 95 aa9.34□□□□□ -0.91
VPS36-203ENST00000475375 BAALC-AS2P0C853 105 aa9.33□□□□□ -0.92
VPS36-203ENST00000475375 FAM236AA0A1B0GUQ0 79 aa9.32□□□□□ -0.92
VPS36-203ENST00000475375 FAM236BA0A1B0GV22 79 aa9.32□□□□□ -0.92
VPS36-203ENST00000475375 IGKV2D-30A0A075B6S6 120 aa9.31□□□□□ -0.92
VPS36-203ENST00000475375 NDUFS5O43920 106 aa9.31□□□□□ -0.92
VPS36-203ENST00000475375 IGKV2-30P06310 120 aa9.31□□□□□ -0.92
VPS36-203ENST00000475375 MRPL34Q9BQ48 92 aaKnown RBP9.31□□□□□ -0.92
VPS36-203ENST00000475375 Q5VV11 94 aa9.3□□□□□ -0.92
VPS36-203ENST00000475375 PRR15Q8IV56 129 aa9.3□□□□□ -0.92
VPS36-203ENST00000475375 TMEM254Q8TBM7 123 aa9.29□□□□□ -0.92
VPS36-203ENST00000475375 MT1BP07438 61 aa9.28□□□□□ -0.92
VPS36-203ENST00000475375 MMP24-AS1A0A0U1RRL7 71 aa9.25□□□□□ -0.93
VPS36-203ENST00000475375 C5orf47Q569G3 176 aa9.24□□□□□ -0.93
VPS36-203ENST00000475375 C7orf65Q6ZTY9 151 aa9.24□□□□□ -0.93
VPS36-203ENST00000475375 A0A1B0GW54 56 aa9.23□□□□□ -0.93
VPS36-203ENST00000475375 hDV103S1A0JD37 113 aa9.22□□□□□ -0.93
VPS36-203ENST00000475375 MDN1Q9NU22 5596 aa9.21□□□□□ -0.93
VPS36-203ENST00000475375 KRTAP5-9P26371 169 aa9.21□□□□□ -0.94
VPS36-203ENST00000475375 LOC110117498A0A087WWA1 95 aa9.2□□□□□ -0.94
VPS36-203ENST00000475375 JMJD7-PLA2G4BH0Y9G9 81 aa9.2□□□□□ -0.94
VPS36-203ENST00000475375 NREPQ16612 68 aa9.2□□□□□ -0.94
VPS36-203ENST00000475375 KMT2DO14686 5537 aa9.19□□□□□ -0.94
VPS36-203ENST00000475375 KRTAP10-5P60370 271 aa9.19□□□□□ -0.94
VPS36-203ENST00000475375 C4orf26Q17RF5 130 aa9.19□□□□□ -0.94
VPS36-203ENST00000475375 KRTAP19-8Q3LI54 63 aa9.17□□□□□ -0.94
VPS36-203ENST00000475375 PDE6GP18545 87 aa9.16□□□□□ -0.94
VPS36-203ENST00000475375 Q5W150 140 aa9.15□□□□□ -0.94
VPS36-203ENST00000475375 SPRR2GQ9BYE4 73 aa9.15□□□□□ -0.94
VPS36-203ENST00000475375 C14orf132Q9NPU4 83 aa9.15□□□□□ -0.94
VPS36-203ENST00000475375 K7EQZ3 153 aa9.13□□□□□ -0.95
VPS36-203ENST00000475375 ATXN8Q156A1 80 aa9.12□□□□□ -0.95
VPS36-203ENST00000475375 S4R3F8 94 aa9.08□□□□□ -0.96
VPS36-203ENST00000475375 CSAG1Q6PB30 78 aa9.07□□□□□ -0.96
VPS36-203ENST00000475375 UQCR10Q9UDW1 63 aa9.07□□□□□ -0.96
VPS36-203ENST00000475375 KRTAP2-3P0C7H8 128 aa9.06□□□□□ -0.96
VPS36-203ENST00000475375 KRTAP2-4Q9BYR9 128 aa9.06□□□□□ -0.96
VPS36-203ENST00000475375 IMUPQ9GZP8 106 aa9.06□□□□□ -0.96
VPS36-203ENST00000475375 PYY3Q5JQD4 70 aa9.04□□□□□ -0.96
VPS36-203ENST00000475375 HCG22E2RYF7 251 aa9.01□□□□□ -0.97
VPS36-203ENST00000475375 NAA38Q9BRA0 125 aaKnown RBP9.01□□□□□ -0.97
VPS36-203ENST00000475375 KLKP1Q107X0 134 aa8.99□□□□□ -0.97
VPS36-203ENST00000475375 LCA10Q71F78 164 aa8.99□□□□□ -0.97
VPS36-203ENST00000475375 BPY2O14599 106 aa8.98□□□□□ -0.97
VPS36-203ENST00000475375 CASC2Q6XLA1 102 aa8.98□□□□□ -0.97
VPS36-203ENST00000475375 KRTAP3-1Q9BYR8 98 aa8.97□□□□□ -0.97
VPS36-203ENST00000475375 C1orf64Q8NEQ6 169 aa8.94□□□□□ -0.98
VPS36-203ENST00000475375 CXCL6P80162 114 aa8.93□□□□□ -0.98
VPS36-203ENST00000475375 Q8N9L7 120 aa8.93□□□□□ -0.98
VPS36-203ENST00000475375 SPRR2EP22531 72 aa8.89□□□□□ -0.99
VPS36-203ENST00000475375 SPRR2BP35325 72 aa8.89□□□□□ -0.99
VPS36-203ENST00000475375 SPRR2AP35326 72 aa8.89□□□□□ -0.99
VPS36-203ENST00000475375 SPRR2FQ96RM1 72 aa8.89□□□□□ -0.99
VPS36-203ENST00000475375 SMCPP49901 116 aaPredicted RBP8.84□□□□□ -0.99
VPS36-203ENST00000475375 CRIPTQ9P021 101 aa8.82□□□□□ -1
VPS36-203ENST00000475375 M0R143 59 aa8.81□□□□□ -1
VPS36-203ENST00000475375 KRTAP3-3Q9BYR6 98 aa8.75□□□□□ -1.01
VPS36-203ENST00000475375 TSTD3H0UI37 97 aa8.74□□□□□ -1.01
VPS36-203ENST00000475375 KRTAP2-2Q9BYT5 123 aa8.74□□□□□ -1.01
VPS36-203ENST00000475375 KRTAP2-1Q9BYU5 128 aa8.74□□□□□ -1.01
VPS36-203ENST00000475375 H3BT86 120 aa8.71□□□□□ -1.02
VPS36-203ENST00000475375 KRTAP8-1Q8IUC2 63 aa8.68□□□□□ -1.02
VPS36-203ENST00000475375 PRO2289Q9P1D8 64 aa8.68□□□□□ -1.02
VPS36-203ENST00000475375 LCE1AQ5T7P2 110 aa8.65□□□□□ -1.02
VPS36-203ENST00000475375 A0A087WVE0 104 aa8.62□□□□□ -1.03
VPS36-203ENST00000475375 SPRR2DP22532 72 aa8.61□□□□□ -1.03
VPS36-203ENST00000475375 TMA7Q9Y2S6 64 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms