RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 C14orf132Q9NPU4 83 aa7.5□□□□□ -1.21
VAMP4-203ENST00000474047 CRCT1Q9UGL9 99 aa7.5□□□□□ -1.21
VAMP4-203ENST00000474047 A8MUU9 505 aa7.49□□□□□ -1.21
VAMP4-203ENST00000474047 J3KT08 172 aa7.48□□□□□ -1.21
VAMP4-203ENST00000474047 A0A1B0GW54 56 aa7.47□□□□□ -1.21
VAMP4-203ENST00000474047 COX6B2Q6YFQ2 88 aa7.47□□□□□ -1.21
VAMP4-203ENST00000474047 H3BT86 120 aa7.46□□□□□ -1.22
VAMP4-203ENST00000474047 A0A1B0GVX0 72 aa7.45□□□□□ -1.22
VAMP4-203ENST00000474047 NDUFB1O75438 58 aa7.45□□□□□ -1.22
VAMP4-203ENST00000474047 MTURNQ8N3F0 131 aa7.45□□□□□ -1.22
VAMP4-203ENST00000474047 C8orf87E5RJ46 101 aa7.44□□□□□ -1.22
VAMP4-203ENST00000474047 NOTCH2NLQ7Z3S9 236 aa7.44□□□□□ -1.22
VAMP4-203ENST00000474047 LCE2CQ5TA81 110 aa7.44□□□□□ -1.22
VAMP4-203ENST00000474047 SPCS1Q9Y6A9 102 aa7.44□□□□□ -1.22
VAMP4-203ENST00000474047 COL5A1-AS1Q5SY13 56 aa7.43□□□□□ -1.22
VAMP4-203ENST00000474047 KRTAP19-2Q3LHN2 52 aa7.42□□□□□ -1.22
VAMP4-203ENST00000474047 KRTAP16-1A8MUX0 517 aa7.41□□□□□ -1.22
VAMP4-203ENST00000474047 NREPQ16612 68 aa7.41□□□□□ -1.22
VAMP4-203ENST00000474047 MT1HP80294 61 aa7.38□□□□□ -1.23
VAMP4-203ENST00000474047 A8MWP4 228 aa7.37□□□□□ -1.23
VAMP4-203ENST00000474047 M0R2T5 61 aa7.37□□□□□ -1.23
VAMP4-203ENST00000474047 PCP4L1A6NKN8 68 aa7.35□□□□□ -1.23
VAMP4-203ENST00000474047 FSIP2Q5CZC0 6907 aa7.34□□□□□ -1.23
VAMP4-203ENST00000474047 C8orf17Q9NRJ1 99 aa7.33□□□□□ -1.24
VAMP4-203ENST00000474047 IGKV3D-7A0A0C4DH55 119 aa7.32□□□□□ -1.24
VAMP4-203ENST00000474047 K7EP34 96 aa7.31□□□□□ -1.24
VAMP4-203ENST00000474047 PRR15Q8IV56 129 aa7.3□□□□□ -1.24
VAMP4-203ENST00000474047 SMCPP49901 116 aaPredicted RBP7.29□□□□□ -1.24
VAMP4-203ENST00000474047 ZCCHC13Q8WW36 166 aaKnown RBP7.29□□□□□ -1.24
VAMP4-203ENST00000474047 BPY2O14599 106 aa7.28□□□□□ -1.24
VAMP4-203ENST00000474047 Q6ZVQ6 151 aa7.28□□□□□ -1.24
VAMP4-203ENST00000474047 GTF2H5Q6ZYL4 71 aa7.28□□□□□ -1.24
VAMP4-203ENST00000474047 FAM236DA0A1B0GTK5 79 aa7.27□□□□□ -1.25
VAMP4-203ENST00000474047 FAM236CP0DP71 79 aa7.27□□□□□ -1.25
VAMP4-203ENST00000474047 Q8N9P0 234 aaPredicted RBP7.27□□□□□ -1.25
VAMP4-203ENST00000474047 RBM12B-AS1Q9P1G2 102 aa7.26□□□□□ -1.25
VAMP4-203ENST00000474047 PRO0461Q9UI25 63 aa7.24□□□□□ -1.25
VAMP4-203ENST00000474047 K7EQZ3 153 aa7.24□□□□□ -1.25
VAMP4-203ENST00000474047 MMP24-AS1A0A0U1RRL7 71 aa7.22□□□□□ -1.25
VAMP4-203ENST00000474047 hDV103S1A0JD37 113 aa7.22□□□□□ -1.25
VAMP4-203ENST00000474047 NDUFS5O43920 106 aa7.22□□□□□ -1.25
VAMP4-203ENST00000474047 KRTAP10-6P60371 365 aaPredicted RBP7.22□□□□□ -1.25
VAMP4-203ENST00000474047 TMEM254Q8TBM7 123 aa7.22□□□□□ -1.25
VAMP4-203ENST00000474047 MRPL34Q9BQ48 92 aaKnown RBP7.22□□□□□ -1.25
VAMP4-203ENST00000474047 UBL5Q9BZL1 73 aa7.21□□□□□ -1.26
VAMP4-203ENST00000474047 KRTAP9-7A8MTY7 169 aa7.2□□□□□ -1.26
VAMP4-203ENST00000474047 F8W1H4 67 aa7.2□□□□□ -1.26
VAMP4-203ENST00000474047 SPINK7P58062 85 aa7.2□□□□□ -1.26
VAMP4-203ENST00000474047 HRES1P13985 223 aa7.19□□□□□ -1.26
VAMP4-203ENST00000474047 LORP23490 312 aaPredicted RBP7.18□□□□□ -1.26
VAMP4-203ENST00000474047 LINC00846Q9NV44 126 aa7.18□□□□□ -1.26
VAMP4-203ENST00000474047 WFDC13Q8IUB5 93 aa7.16□□□□□ -1.26
VAMP4-203ENST00000474047 Q8N9L7 120 aa7.16□□□□□ -1.26
VAMP4-203ENST00000474047 ETDBQ3ZM63 59 aa7.15□□□□□ -1.27
VAMP4-203ENST00000474047 CASC2Q6XLA1 102 aa7.15□□□□□ -1.27
VAMP4-203ENST00000474047 MPLKIPQ8TAP9 179 aa7.14□□□□□ -1.27
VAMP4-203ENST00000474047 FLGP20930 4061 aaPredicted RBP7.13□□□□□ -1.27
VAMP4-203ENST00000474047 HCG22E2RYF7 251 aa7.09□□□□□ -1.27
VAMP4-203ENST00000474047 IGKV2D-30A0A075B6S6 120 aa7.05□□□□□ -1.28
VAMP4-203ENST00000474047 IGKV2-30P06310 120 aa7.05□□□□□ -1.28
VAMP4-203ENST00000474047 CXCL6P80162 114 aa7.04□□□□□ -1.28
VAMP4-203ENST00000474047 Q5W150 140 aa7.03□□□□□ -1.28
VAMP4-203ENST00000474047 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.02□□□□□ -1.29
VAMP4-203ENST00000474047 C7orf65Q6ZTY9 151 aa7.02□□□□□ -1.29
VAMP4-203ENST00000474047 ACYP1P07311 99 aa7□□□□□ -1.29
VAMP4-203ENST00000474047 KRTAP9-8Q9BYQ0 159 aa6.98□□□□□ -1.29
VAMP4-203ENST00000474047 TP53AIP1Q9HCN2 124 aa6.95□□□□□ -1.3
VAMP4-203ENST00000474047 H1FX-AS1Q4G0G2 97 aa6.94□□□□□ -1.3
VAMP4-203ENST00000474047 FAM240AA0A1B0GVK7 77 aa6.93□□□□□ -1.3
VAMP4-203ENST00000474047 A0A1B0GV90 55 aa6.91□□□□□ -1.3
VAMP4-203ENST00000474047 MT2AP02795 61 aa6.9□□□□□ -1.3
VAMP4-203ENST00000474047 KRTAP10-10P60014 251 aa6.9□□□□□ -1.3
VAMP4-203ENST00000474047 ATP5EP2Q5VTU8 51 aa6.9□□□□□ -1.3
VAMP4-203ENST00000474047 C4orf26Q17RF5 130 aa6.9□□□□□ -1.31
VAMP4-203ENST00000474047 LOC100996750A0A140TA64 210 aa6.89□□□□□ -1.31
VAMP4-203ENST00000474047 HIST1H4AP62805 103 aaKnown RBP6.89□□□□□ -1.31
VAMP4-203ENST00000474047 KRTAP4-6Q9BYQ5 205 aa6.89□□□□□ -1.31
VAMP4-203ENST00000474047 MT1FP04733 61 aa6.84□□□□□ -1.31
VAMP4-203ENST00000474047 LINC00643Q86TS7 51 aa6.82□□□□□ -1.32
VAMP4-203ENST00000474047 C1orf64Q8NEQ6 169 aa6.8□□□□□ -1.32
VAMP4-203ENST00000474047 TRAV22A0A0B4J277 110 aa6.79□□□□□ -1.32
VAMP4-203ENST00000474047 J3QR89 54 aa6.78□□□□□ -1.32
VAMP4-203ENST00000474047 UQCRQO14949 82 aa6.76□□□□□ -1.33
VAMP4-203ENST00000474047 LOC101927531A0A1B0GV80 90 aa6.76□□□□□ -1.33
VAMP4-203ENST00000474047 KRTAP9-3Q9BYQ3 159 aa6.76□□□□□ -1.33
VAMP4-203ENST00000474047 CYP4F30PQ9H0H9 118 aa6.76□□□□□ -1.33
VAMP4-203ENST00000474047 A0A087WVE0 104 aa6.75□□□□□ -1.33
VAMP4-203ENST00000474047 S4R3F8 94 aa6.74□□□□□ -1.33
VAMP4-203ENST00000474047 H0Y9P7 68 aa6.73□□□□□ -1.33
VAMP4-203ENST00000474047 C5orf47Q569G3 176 aa6.73□□□□□ -1.33
VAMP4-203ENST00000474047 KRTAP3-1Q9BYR8 98 aa6.73□□□□□ -1.33
VAMP4-203ENST00000474047 ATOX1O00244 68 aa6.72□□□□□ -1.33
VAMP4-203ENST00000474047 LCE2BO14633 110 aa6.7□□□□□ -1.34
VAMP4-203ENST00000474047 CSAG1Q6PB30 78 aa6.69□□□□□ -1.34
VAMP4-203ENST00000474047 LCA10Q71F78 164 aa6.66□□□□□ -1.34
VAMP4-203ENST00000474047 FAM236AA0A1B0GUQ0 79 aa6.64□□□□□ -1.35
VAMP4-203ENST00000474047 FAM236BA0A1B0GV22 79 aa6.64□□□□□ -1.35
VAMP4-203ENST00000474047 MP68P56378 58 aa6.64□□□□□ -1.35
VAMP4-203ENST00000474047 LINC00208Q96KT6 92 aa6.63□□□□□ -1.35
VAMP4-203ENST00000474047 SCGB1A1P11684 91 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms