RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 A0A0U1RQV1 116 aa6.66□□□□□ -1.34
DDX56-209ENST00000473924 NDUFB1O75438 58 aa6.66□□□□□ -1.34
DDX56-209ENST00000473924 A0A1B0GVX0 72 aa6.65□□□□□ -1.34
DDX56-209ENST00000473924 Q75L30 129 aa6.65□□□□□ -1.34
DDX56-209ENST00000473924 MUC17Q685J3 4493 aa6.64□□□□□ -1.35
DDX56-209ENST00000473924 ATP11AUNQ6ZP68 121 aa6.64□□□□□ -1.35
DDX56-209ENST00000473924 C8orf87E5RJ46 101 aa6.63□□□□□ -1.35
DDX56-209ENST00000473924 A8MWP4 228 aa6.62□□□□□ -1.35
DDX56-209ENST00000473924 ETDBQ3ZM63 59 aa6.62□□□□□ -1.35
DDX56-209ENST00000473924 NOTCH2NLQ7Z3S9 236 aa6.62□□□□□ -1.35
DDX56-209ENST00000473924 C20orf166-AS1Q96NR2 134 aa6.62□□□□□ -1.35
DDX56-209ENST00000473924 KRTAP4-1Q9BYQ7 146 aa6.62□□□□□ -1.35
DDX56-209ENST00000473924 MUC2Q02817 5179 aa6.61□□□□□ -1.35
DDX56-209ENST00000473924 A8MUU9 505 aa6.61□□□□□ -1.35
DDX56-209ENST00000473924 KRTAP16-1A8MUX0 517 aa6.59□□□□□ -1.35
DDX56-209ENST00000473924 BPY2O14599 106 aa6.59□□□□□ -1.35
DDX56-209ENST00000473924 Q6ZVQ6 151 aa6.59□□□□□ -1.35
DDX56-209ENST00000473924 IGKV3D-7A0A0C4DH55 119 aa6.58□□□□□ -1.36
DDX56-209ENST00000473924 UBL5Q9BZL1 73 aa6.58□□□□□ -1.36
DDX56-209ENST00000473924 A0A1B0GV90 55 aa6.56□□□□□ -1.36
DDX56-209ENST00000473924 PRR15Q8IV56 129 aa6.56□□□□□ -1.36
DDX56-209ENST00000473924 C8orf17Q9NRJ1 99 aa6.56□□□□□ -1.36
DDX56-209ENST00000473924 LINC00846Q9NV44 126 aa6.56□□□□□ -1.36
DDX56-209ENST00000473924 K7EQZ3 153 aa6.54□□□□□ -1.36
DDX56-209ENST00000473924 MMP24-AS1A0A0U1RRL7 71 aa6.5□□□□□ -1.37
DDX56-209ENST00000473924 Q8N9L7 120 aa6.49□□□□□ -1.37
DDX56-209ENST00000473924 hDV103S1A0JD37 113 aa6.48□□□□□ -1.37
DDX56-209ENST00000473924 Q8N9P0 234 aaPredicted RBP6.48□□□□□ -1.37
DDX56-209ENST00000473924 TMEM254Q8TBM7 123 aa6.48□□□□□ -1.37
DDX56-209ENST00000473924 ACYP1P07311 99 aa6.47□□□□□ -1.37
DDX56-209ENST00000473924 MRPL34Q9BQ48 92 aaKnown RBP6.47□□□□□ -1.37
DDX56-209ENST00000473924 NDUFS5O43920 106 aa6.45□□□□□ -1.38
DDX56-209ENST00000473924 WFDC13Q8IUB5 93 aa6.45□□□□□ -1.38
DDX56-209ENST00000473924 ZCCHC13Q8WW36 166 aaKnown RBP6.45□□□□□ -1.38
DDX56-209ENST00000473924 KRTAP9-2Q9BYQ4 174 aa6.45□□□□□ -1.38
DDX56-209ENST00000473924 CASC2Q6XLA1 102 aa6.44□□□□□ -1.38
DDX56-209ENST00000473924 COX6B2Q6YFQ2 88 aa6.44□□□□□ -1.38
DDX56-209ENST00000473924 FAM240AA0A1B0GVK7 77 aa6.43□□□□□ -1.38
DDX56-209ENST00000473924 CXCL6P80162 114 aa6.43□□□□□ -1.38
DDX56-209ENST00000473924 FAT4Q6V0I7 4981 aa6.4□□□□□ -1.38
DDX56-209ENST00000473924 HCG22E2RYF7 251 aa6.4□□□□□ -1.38
DDX56-209ENST00000473924 KRTAP19-2Q3LHN2 52 aa6.4□□□□□ -1.38
DDX56-209ENST00000473924 LCE2AQ5TA79 106 aaPredicted RBP6.4□□□□□ -1.38
DDX56-209ENST00000473924 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
DDX56-209ENST00000473924 ATP5EP2Q5VTU8 51 aa6.36□□□□□ -1.39
DDX56-209ENST00000473924 J3QR89 54 aa6.35□□□□□ -1.39
DDX56-209ENST00000473924 SPINK7P58062 85 aa6.35□□□□□ -1.39
DDX56-209ENST00000473924 KRTAP9-6A0A140TA67 174 aa6.34□□□□□ -1.39
DDX56-209ENST00000473924 RBM12B-AS1Q9P1G2 102 aa6.34□□□□□ -1.39
DDX56-209ENST00000473924 FAM236DA0A1B0GTK5 79 aa6.33□□□□□ -1.4
DDX56-209ENST00000473924 FAM236CP0DP71 79 aa6.33□□□□□ -1.4
DDX56-209ENST00000473924 HRES1P13985 223 aa6.32□□□□□ -1.4
DDX56-209ENST00000473924 HIST1H4AP62805 103 aaKnown RBP6.32□□□□□ -1.4
DDX56-209ENST00000473924 MT1HP80294 61 aa6.32□□□□□ -1.4
DDX56-209ENST00000473924 LINC00643Q86TS7 51 aa6.32□□□□□ -1.4
DDX56-209ENST00000473924 M0R2T5 61 aa6.3□□□□□ -1.4
DDX56-209ENST00000473924 Q5W150 140 aa6.3□□□□□ -1.4
DDX56-209ENST00000473924 IGKV2D-30A0A075B6S6 120 aa6.28□□□□□ -1.4
DDX56-209ENST00000473924 IGKV2-30P06310 120 aa6.28□□□□□ -1.4
DDX56-209ENST00000473924 MPLKIPQ8TAP9 179 aa6.28□□□□□ -1.4
DDX56-209ENST00000473924 TP53AIP1Q9HCN2 124 aa6.28□□□□□ -1.4
DDX56-209ENST00000473924 C7orf65Q6ZTY9 151 aa6.26□□□□□ -1.41
DDX56-209ENST00000473924 A0A087WVE0 104 aa6.22□□□□□ -1.41
DDX56-209ENST00000473924 K7ERU9 68 aa6.21□□□□□ -1.42
DDX56-209ENST00000473924 KRTAP10-6P60371 365 aaPredicted RBP6.17□□□□□ -1.42
DDX56-209ENST00000473924 TRAV22A0A0B4J277 110 aa6.16□□□□□ -1.42
DDX56-209ENST00000473924 UQCRQO14949 82 aa6.15□□□□□ -1.42
DDX56-209ENST00000473924 LORP23490 312 aaPredicted RBP6.14□□□□□ -1.43
DDX56-209ENST00000473924 FLGP20930 4061 aaPredicted RBP6.14□□□□□ -1.43
DDX56-209ENST00000473924 C4orf26Q17RF5 130 aa6.13□□□□□ -1.43
DDX56-209ENST00000473924 H0Y9P7 68 aa6.11□□□□□ -1.43
DDX56-209ENST00000473924 H1FX-AS1Q4G0G2 97 aa6.11□□□□□ -1.43
DDX56-209ENST00000473924 LOC101927531A0A1B0GV80 90 aa6.1□□□□□ -1.43
DDX56-209ENST00000473924 ATOX1O00244 68 aa6.1□□□□□ -1.43
DDX56-209ENST00000473924 SCGB1A1P11684 91 aa6.09□□□□□ -1.43
DDX56-209ENST00000473924 CYP4F30PQ9H0H9 118 aa6.09□□□□□ -1.43
DDX56-209ENST00000473924 MT-ATP8P03928 68 aa6.08□□□□□ -1.44
DDX56-209ENST00000473924 IMUPQ9GZP8 106 aa6.08□□□□□ -1.44
DDX56-209ENST00000473924 LCE2DQ5TA82 110 aaPredicted RBP6.07□□□□□ -1.44
DDX56-209ENST00000473924 OCR1Q9BZK8 76 aa6.07□□□□□ -1.44
DDX56-209ENST00000473924 MP68P56378 58 aa6.05□□□□□ -1.44
DDX56-209ENST00000473924 C1orf64Q8NEQ6 169 aa6.05□□□□□ -1.44
DDX56-209ENST00000473924 CRCT1Q9UGL9 99 aa6.05□□□□□ -1.44
DDX56-209ENST00000473924 LINC00208Q96KT6 92 aa6.03□□□□□ -1.44
DDX56-209ENST00000473924 C5orf47Q569G3 176 aa6.02□□□□□ -1.45
DDX56-209ENST00000473924 KRTAP9-8Q9BYQ0 159 aa6□□□□□ -1.45
DDX56-209ENST00000473924 FAM236AA0A1B0GUQ0 79 aa5.99□□□□□ -1.45
DDX56-209ENST00000473924 FAM236BA0A1B0GV22 79 aa5.99□□□□□ -1.45
DDX56-209ENST00000473924 KRTAP3-1Q9BYR8 98 aa5.99□□□□□ -1.45
DDX56-209ENST00000473924 H3BPC8 53 aa5.97□□□□□ -1.45
DDX56-209ENST00000473924 SMIM20Q8N5G0 67 aa5.96□□□□□ -1.46
DDX56-209ENST00000473924 S4R3F8 94 aa5.96□□□□□ -1.46
DDX56-209ENST00000473924 MT2AP02795 61 aa5.95□□□□□ -1.46
DDX56-209ENST00000473924 FSIP2Q5CZC0 6907 aa5.95□□□□□ -1.46
DDX56-209ENST00000473924 KLKP1Q107X0 134 aa5.94□□□□□ -1.46
DDX56-209ENST00000473924 KRTAP10-10P60014 251 aa5.93□□□□□ -1.46
DDX56-209ENST00000473924 TRAV7A0A075B6U4 112 aa5.92□□□□□ -1.46
DDX56-209ENST00000473924 MT1FP04733 61 aa5.91□□□□□ -1.46
DDX56-209ENST00000473924 LCA10Q71F78 164 aa5.91□□□□□ -1.46
DDX56-209ENST00000473924 CSAG1Q6PB30 78 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms