RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 NAA38Q9BRA0 125 aaKnown RBP10.59□□□□□ -0.71
SREBF1-210ENST00000471445 J3KT08 172 aa10.57□□□□□ -0.72
SREBF1-210ENST00000471445 SMIM6P0DI80 62 aa10.57□□□□□ -0.72
SREBF1-210ENST00000471445 Q6ZQT0 140 aa10.57□□□□□ -0.72
SREBF1-210ENST00000471445 HRES1P13985 223 aa10.56□□□□□ -0.72
SREBF1-210ENST00000471445 MPLKIPQ8TAP9 179 aa10.56□□□□□ -0.72
SREBF1-210ENST00000471445 JMJD7-PLA2G4BH0Y9G9 81 aa10.54□□□□□ -0.72
SREBF1-210ENST00000471445 LOC110117498A0A087WWA1 95 aa10.53□□□□□ -0.72
SREBF1-210ENST00000471445 FAM236DA0A1B0GTK5 79 aa10.51□□□□□ -0.73
SREBF1-210ENST00000471445 FAM236CP0DP71 79 aa10.51□□□□□ -0.73
SREBF1-210ENST00000471445 KRTAP9-8Q9BYQ0 159 aa10.51□□□□□ -0.73
SREBF1-210ENST00000471445 A0A1B0GW54 56 aa10.5□□□□□ -0.73
SREBF1-210ENST00000471445 RBM12B-AS1Q9P1G2 102 aa10.49□□□□□ -0.73
SREBF1-210ENST00000471445 PDE6GP18545 87 aa10.47□□□□□ -0.73
SREBF1-210ENST00000471445 LYRM7Q5U5X0 104 aa10.47□□□□□ -0.73
SREBF1-210ENST00000471445 ZCCHC13Q8WW36 166 aaKnown RBP10.47□□□□□ -0.73
SREBF1-210ENST00000471445 NDUFB1O75438 58 aa10.46□□□□□ -0.73
SREBF1-210ENST00000471445 Q8N9P0 234 aaPredicted RBP10.45□□□□□ -0.74
SREBF1-210ENST00000471445 C14orf132Q9NPU4 83 aa10.45□□□□□ -0.74
SREBF1-210ENST00000471445 A8MWP4 228 aa10.44□□□□□ -0.74
SREBF1-210ENST00000471445 C8orf17Q9NRJ1 99 aa10.43□□□□□ -0.74
SREBF1-210ENST00000471445 TSTD3H0UI37 97 aa10.42□□□□□ -0.74
SREBF1-210ENST00000471445 IGKV3D-7A0A0C4DH55 119 aa10.4□□□□□ -0.74
SREBF1-210ENST00000471445 BATFQ16520 125 aa10.38□□□□□ -0.75
SREBF1-210ENST00000471445 MT2AP02795 61 aa10.36□□□□□ -0.75
SREBF1-210ENST00000471445 SPINK7P58062 85 aa10.36□□□□□ -0.75
SREBF1-210ENST00000471445 KRTAP9-7A8MTY7 169 aa10.34□□□□□ -0.75
SREBF1-210ENST00000471445 PRR15Q8IV56 129 aa10.33□□□□□ -0.76
SREBF1-210ENST00000471445 C9orf118A6NHY6 69 aa10.32□□□□□ -0.76
SREBF1-210ENST00000471445 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.32□□□□□ -0.76
SREBF1-210ENST00000471445 H3BT86 120 aa10.32□□□□□ -0.76
SREBF1-210ENST00000471445 Q6ZVQ6 151 aa10.32□□□□□ -0.76
SREBF1-210ENST00000471445 MTURNQ8N3F0 131 aa10.32□□□□□ -0.76
SREBF1-210ENST00000471445 NREPQ16612 68 aa10.31□□□□□ -0.76
SREBF1-210ENST00000471445 MMP24-AS1A0A0U1RRL7 71 aa10.29□□□□□ -0.76
SREBF1-210ENST00000471445 TAX1BP3O14907 124 aa10.29□□□□□ -0.76
SREBF1-210ENST00000471445 MT1FP04733 61 aa10.28□□□□□ -0.76
SREBF1-210ENST00000471445 USH2AO75445 5202 aa10.27□□□□□ -0.77
SREBF1-210ENST00000471445 LOC105371267A0A1B0GV96 52 aa10.27□□□□□ -0.77
SREBF1-210ENST00000471445 A0A1W2PPM0 123 aa10.27□□□□□ -0.77
SREBF1-210ENST00000471445 TMEM254Q8TBM7 123 aa10.26□□□□□ -0.77
SREBF1-210ENST00000471445 WFDC13Q8IUB5 93 aa10.25□□□□□ -0.77
SREBF1-210ENST00000471445 MRPL34Q9BQ48 92 aaKnown RBP10.25□□□□□ -0.77
SREBF1-210ENST00000471445 K7EQZ3 153 aa10.22□□□□□ -0.77
SREBF1-210ENST00000471445 SSPOA2VEC9 5147 aa10.22□□□□□ -0.77
SREBF1-210ENST00000471445 hDV103S1A0JD37 113 aa10.18□□□□□ -0.78
SREBF1-210ENST00000471445 KRTAP9-3Q9BYQ3 159 aa10.18□□□□□ -0.78
SREBF1-210ENST00000471445 KRTAP10-10P60014 251 aa10.17□□□□□ -0.78
SREBF1-210ENST00000471445 LCE2BO14633 110 aa10.15□□□□□ -0.78
SREBF1-210ENST00000471445 BPY2O14599 106 aa10.14□□□□□ -0.79
SREBF1-210ENST00000471445 SPCS1Q9Y6A9 102 aa10.13□□□□□ -0.79
SREBF1-210ENST00000471445 NDUFS5O43920 106 aa10.11□□□□□ -0.79
SREBF1-210ENST00000471445 SMCPP49901 116 aaPredicted RBP10.08□□□□□ -0.8
SREBF1-210ENST00000471445 Q8N9L7 120 aa10.05□□□□□ -0.8
SREBF1-210ENST00000471445 Q5W150 140 aa10.03□□□□□ -0.8
SREBF1-210ENST00000471445 C7orf65Q6ZTY9 151 aa10.02□□□□□ -0.81
SREBF1-210ENST00000471445 FCGBPQ9Y6R7 5405 aaPredicted RBP10.01□□□□□ -0.81
SREBF1-210ENST00000471445 CASC2Q6XLA1 102 aa10.01□□□□□ -0.81
SREBF1-210ENST00000471445 IGKV2D-30A0A075B6S6 120 aa10□□□□□ -0.81
SREBF1-210ENST00000471445 IGKV2-30P06310 120 aa10□□□□□ -0.81
SREBF1-210ENST00000471445 H1FX-AS1Q4G0G2 97 aa10□□□□□ -0.81
SREBF1-210ENST00000471445 PRO0461Q9UI25 63 aa10□□□□□ -0.81
SREBF1-210ENST00000471445 COL5A1-AS1Q5SY13 56 aa9.99□□□□□ -0.81
SREBF1-210ENST00000471445 KRTAP19-1Q8IUB9 90 aa9.99□□□□□ -0.81
SREBF1-210ENST00000471445 HCG22E2RYF7 251 aa9.98□□□□□ -0.81
SREBF1-210ENST00000471445 K7EP34 96 aa9.96□□□□□ -0.82
SREBF1-210ENST00000471445 LINC00846Q9NV44 126 aa9.96□□□□□ -0.82
SREBF1-210ENST00000471445 UBL5Q9BZL1 73 aa9.93□□□□□ -0.82
SREBF1-210ENST00000471445 CXCL6P80162 114 aa9.91□□□□□ -0.82
SREBF1-210ENST00000471445 C4orf26Q17RF5 130 aa9.83□□□□□ -0.84
SREBF1-210ENST00000471445 KRTAP19-6Q3LI70 58 aa9.82□□□□□ -0.84
SREBF1-210ENST00000471445 GTF2H5Q6ZYL4 71 aa9.79□□□□□ -0.84
SREBF1-210ENST00000471445 SYNE2Q8WXH0 6885 aaKnown RBP9.77□□□□□ -0.85
SREBF1-210ENST00000471445 MACF1Q9UPN3 7388 aaKnown RBP9.77□□□□□ -0.85
SREBF1-210ENST00000471445 F8W1H4 67 aa9.74□□□□□ -0.85
SREBF1-210ENST00000471445 ETDBQ3ZM63 59 aa9.72□□□□□ -0.85
SREBF1-210ENST00000471445 KRTAP3-1Q9BYR8 98 aa9.72□□□□□ -0.85
SREBF1-210ENST00000471445 TP53AIP1Q9HCN2 124 aa9.7□□□□□ -0.86
SREBF1-210ENST00000471445 C5orf47Q569G3 176 aa9.66□□□□□ -0.86
SREBF1-210ENST00000471445 PCP4L1A6NKN8 68 aa9.65□□□□□ -0.86
SREBF1-210ENST00000471445 C1orf64Q8NEQ6 169 aa9.65□□□□□ -0.86
SREBF1-210ENST00000471445 S4R3F8 94 aa9.65□□□□□ -0.86
SREBF1-210ENST00000471445 LCA10Q71F78 164 aa9.59□□□□□ -0.87
SREBF1-210ENST00000471445 CSAG1Q6PB30 78 aa9.56□□□□□ -0.88
SREBF1-210ENST00000471445 FAM236AA0A1B0GUQ0 79 aa9.55□□□□□ -0.88
SREBF1-210ENST00000471445 FAM236BA0A1B0GV22 79 aa9.55□□□□□ -0.88
SREBF1-210ENST00000471445 CYP4F30PQ9H0H9 118 aa9.52□□□□□ -0.89
SREBF1-210ENST00000471445 TRAV22A0A0B4J277 110 aa9.51□□□□□ -0.89
SREBF1-210ENST00000471445 ACYP1P07311 99 aa9.51□□□□□ -0.89
SREBF1-210ENST00000471445 KRTAP6-3Q3LI67 103 aa9.51□□□□□ -0.89
SREBF1-210ENST00000471445 FAM240AA0A1B0GVK7 77 aa9.49□□□□□ -0.89
SREBF1-210ENST00000471445 ATP5EP2Q5VTU8 51 aa9.48□□□□□ -0.89
SREBF1-210ENST00000471445 LOC101927531A0A1B0GV80 90 aa9.46□□□□□ -0.9
SREBF1-210ENST00000471445 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.9
SREBF1-210ENST00000471445 SPRR2GQ9BYE4 73 aa9.45□□□□□ -0.9
SREBF1-210ENST00000471445 MT1BP07438 61 aa9.44□□□□□ -0.9
SREBF1-210ENST00000471445 KRTAP19-8Q3LI54 63 aa9.41□□□□□ -0.9
SREBF1-210ENST00000471445 KLKP1Q107X0 134 aa9.4□□□□□ -0.9
SREBF1-210ENST00000471445 HIST1H4AP62805 103 aaKnown RBP9.39□□□□□ -0.91
SREBF1-210ENST00000471445 Q5VV11 94 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms