RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 LOC110117498A0A087WWA1 95 aa8.09□□□□□ -1.11
HDAC6-218ENST00000470942 C8orf87E5RJ46 101 aa8.09□□□□□ -1.11
HDAC6-218ENST00000470942 J3KT08 172 aa8.09□□□□□ -1.11
HDAC6-218ENST00000470942 FLGP20930 4061 aaPredicted RBP8.09□□□□□ -1.11
HDAC6-218ENST00000470942 PDE6GP18545 87 aa8.08□□□□□ -1.12
HDAC6-218ENST00000470942 C14orf132Q9NPU4 83 aa8.08□□□□□ -1.12
HDAC6-218ENST00000470942 C9orf118A6NHY6 69 aa8.06□□□□□ -1.12
HDAC6-218ENST00000470942 KRTAP10-6P60371 365 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-218ENST00000470942 LCE2DQ5TA82 110 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-218ENST00000470942 A0A1B0GW54 56 aa8.05□□□□□ -1.12
HDAC6-218ENST00000470942 NDUFB1O75438 58 aa8.05□□□□□ -1.12
HDAC6-218ENST00000470942 TAX1BP3O14907 124 aa8.04□□□□□ -1.12
HDAC6-218ENST00000470942 LORP23490 312 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-218ENST00000470942 A0A1W2PPM0 123 aa8.02□□□□□ -1.13
HDAC6-218ENST00000470942 MTURNQ8N3F0 131 aa8□□□□□ -1.13
HDAC6-218ENST00000470942 A8MWP4 228 aa7.99□□□□□ -1.13
HDAC6-218ENST00000470942 H3BT86 120 aa7.99□□□□□ -1.13
HDAC6-218ENST00000470942 NREPQ16612 68 aa7.99□□□□□ -1.13
HDAC6-218ENST00000470942 KRTAP9-6A0A140TA67 174 aa7.98□□□□□ -1.13
HDAC6-218ENST00000470942 FAM236DA0A1B0GTK5 79 aa7.97□□□□□ -1.13
HDAC6-218ENST00000470942 FAM236CP0DP71 79 aa7.97□□□□□ -1.13
HDAC6-218ENST00000470942 IGKV3D-7A0A0C4DH55 119 aa7.96□□□□□ -1.14
HDAC6-218ENST00000470942 C8orf17Q9NRJ1 99 aa7.96□□□□□ -1.14
HDAC6-218ENST00000470942 ZCCHC13Q8WW36 166 aaKnown RBP7.95□□□□□ -1.14
HDAC6-218ENST00000470942 RBM12B-AS1Q9P1G2 102 aa7.94□□□□□ -1.14
HDAC6-218ENST00000470942 HRES1P13985 223 aa7.93□□□□□ -1.14
HDAC6-218ENST00000470942 SPCS1Q9Y6A9 102 aa7.93□□□□□ -1.14
HDAC6-218ENST00000470942 Q8N9P0 234 aaPredicted RBP7.92□□□□□ -1.14
HDAC6-218ENST00000470942 PRR15Q8IV56 129 aa7.91□□□□□ -1.14
HDAC6-218ENST00000470942 Q6ZVQ6 151 aa7.9□□□□□ -1.14
HDAC6-218ENST00000470942 MPLKIPQ8TAP9 179 aa7.89□□□□□ -1.15
HDAC6-218ENST00000470942 SPINK7P58062 85 aa7.87□□□□□ -1.15
HDAC6-218ENST00000470942 COL5A1-AS1Q5SY13 56 aa7.87□□□□□ -1.15
HDAC6-218ENST00000470942 MMP24-AS1A0A0U1RRL7 71 aa7.85□□□□□ -1.15
HDAC6-218ENST00000470942 PCP4L1A6NKN8 68 aa7.84□□□□□ -1.15
HDAC6-218ENST00000470942 K7EQZ3 153 aa7.84□□□□□ -1.15
HDAC6-218ENST00000470942 BPY2O14599 106 aa7.84□□□□□ -1.15
HDAC6-218ENST00000470942 TMEM254Q8TBM7 123 aa7.84□□□□□ -1.15
HDAC6-218ENST00000470942 MRPL34Q9BQ48 92 aaKnown RBP7.84□□□□□ -1.15
HDAC6-218ENST00000470942 CRCT1Q9UGL9 99 aa7.84□□□□□ -1.15
HDAC6-218ENST00000470942 SMCPP49901 116 aaPredicted RBP7.83□□□□□ -1.16
HDAC6-218ENST00000470942 hDV103S1A0JD37 113 aa7.82□□□□□ -1.16
HDAC6-218ENST00000470942 FSIP2Q5CZC0 6907 aa7.81□□□□□ -1.16
HDAC6-218ENST00000470942 NDUFS5O43920 106 aa7.81□□□□□ -1.16
HDAC6-218ENST00000470942 K7EP34 96 aa7.79□□□□□ -1.16
HDAC6-218ENST00000470942 KRTAP9-8Q9BYQ0 159 aa7.78□□□□□ -1.16
HDAC6-218ENST00000470942 PRO0461Q9UI25 63 aa7.77□□□□□ -1.17
HDAC6-218ENST00000470942 WFDC13Q8IUB5 93 aa7.76□□□□□ -1.17
HDAC6-218ENST00000470942 Q8N9L7 120 aa7.75□□□□□ -1.17
HDAC6-218ENST00000470942 UBL5Q9BZL1 73 aa7.72□□□□□ -1.17
HDAC6-218ENST00000470942 CASC2Q6XLA1 102 aa7.71□□□□□ -1.18
HDAC6-218ENST00000470942 GTF2H5Q6ZYL4 71 aa7.71□□□□□ -1.18
HDAC6-218ENST00000470942 LINC00846Q9NV44 126 aa7.71□□□□□ -1.18
HDAC6-218ENST00000470942 MT2AP02795 61 aa7.69□□□□□ -1.18
HDAC6-218ENST00000470942 IGKV2D-30A0A075B6S6 120 aa7.67□□□□□ -1.18
HDAC6-218ENST00000470942 HCG22E2RYF7 251 aa7.67□□□□□ -1.18
HDAC6-218ENST00000470942 IGKV2-30P06310 120 aa7.67□□□□□ -1.18
HDAC6-218ENST00000470942 Q5W150 140 aa7.66□□□□□ -1.18
HDAC6-218ENST00000470942 F8W1H4 67 aa7.65□□□□□ -1.18
HDAC6-218ENST00000470942 KRTAP10-10P60014 251 aa7.63□□□□□ -1.19
HDAC6-218ENST00000470942 MT1FP04733 61 aa7.62□□□□□ -1.19
HDAC6-218ENST00000470942 ETDBQ3ZM63 59 aa7.62□□□□□ -1.19
HDAC6-218ENST00000470942 C7orf65Q6ZTY9 151 aa7.62□□□□□ -1.19
HDAC6-218ENST00000470942 CXCL6P80162 114 aa7.61□□□□□ -1.19
HDAC6-218ENST00000470942 H1FX-AS1Q4G0G2 97 aa7.59□□□□□ -1.19
HDAC6-218ENST00000470942 USH2AO75445 5202 aa7.55□□□□□ -1.2
HDAC6-218ENST00000470942 KRTAP9-3Q9BYQ3 159 aa7.53□□□□□ -1.2
HDAC6-218ENST00000470942 C4orf26Q17RF5 130 aa7.51□□□□□ -1.21
HDAC6-218ENST00000470942 LCE2BO14633 110 aa7.49□□□□□ -1.21
HDAC6-218ENST00000470942 TP53AIP1Q9HCN2 124 aa7.48□□□□□ -1.21
HDAC6-218ENST00000470942 SSPOA2VEC9 5147 aa7.46□□□□□ -1.22
HDAC6-218ENST00000470942 A0A1B0GV90 55 aa7.44□□□□□ -1.22
HDAC6-218ENST00000470942 ACYP1P07311 99 aa7.44□□□□□ -1.22
HDAC6-218ENST00000470942 C1orf64Q8NEQ6 169 aa7.39□□□□□ -1.23
HDAC6-218ENST00000470942 FAM240AA0A1B0GVK7 77 aa7.38□□□□□ -1.23
HDAC6-218ENST00000470942 KRTAP3-1Q9BYR8 98 aa7.37□□□□□ -1.23
HDAC6-218ENST00000470942 HIST1H4AP62805 103 aaKnown RBP7.36□□□□□ -1.23
HDAC6-218ENST00000470942 ATP5EP2Q5VTU8 51 aa7.36□□□□□ -1.23
HDAC6-218ENST00000470942 KRTAP19-1Q8IUB9 90 aa7.36□□□□□ -1.23
HDAC6-218ENST00000470942 C5orf47Q569G3 176 aa7.35□□□□□ -1.23
HDAC6-218ENST00000470942 S4R3F8 94 aa7.35□□□□□ -1.23
HDAC6-218ENST00000470942 TRAV22A0A0B4J277 110 aa7.31□□□□□ -1.24
HDAC6-218ENST00000470942 CYP4F30PQ9H0H9 118 aa7.31□□□□□ -1.24
HDAC6-218ENST00000470942 FCGBPQ9Y6R7 5405 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-218ENST00000470942 LOC101927531A0A1B0GV80 90 aa7.28□□□□□ -1.24
HDAC6-218ENST00000470942 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-218ENST00000470942 CSAG1Q6PB30 78 aa7.28□□□□□ -1.24
HDAC6-218ENST00000470942 LCA10Q71F78 164 aa7.28□□□□□ -1.24
HDAC6-218ENST00000470942 FAM236AA0A1B0GUQ0 79 aa7.26□□□□□ -1.25
HDAC6-218ENST00000470942 FAM236BA0A1B0GV22 79 aa7.26□□□□□ -1.25
HDAC6-218ENST00000470942 UQCRQO14949 82 aa7.26□□□□□ -1.25
HDAC6-218ENST00000470942 LINC00643Q86TS7 51 aa7.26□□□□□ -1.25
HDAC6-218ENST00000470942 A0A087WVE0 104 aa7.24□□□□□ -1.25
HDAC6-218ENST00000470942 H0Y9P7 68 aa7.24□□□□□ -1.25
HDAC6-218ENST00000470942 ATOX1O00244 68 aa7.21□□□□□ -1.26
HDAC6-218ENST00000470942 KRTAP19-6Q3LI70 58 aa7.21□□□□□ -1.26
HDAC6-218ENST00000470942 KRTAP9-7A8MTY7 169 aa7.19□□□□□ -1.26
HDAC6-218ENST00000470942 KRTAP3-3Q9BYR6 98 aa7.16□□□□□ -1.26
HDAC6-218ENST00000470942 J3QR89 54 aa7.13□□□□□ -1.27
HDAC6-218ENST00000470942 LINC00208Q96KT6 92 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms