RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 A0A1B0GVX0 72 aa4.39□□□□□ -1.71
TRAPPC3-206ENST00000469757 SMCPP49901 116 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC3-206ENST00000469757 KRTAP19-2Q3LHN2 52 aa4.39□□□□□ -1.71
TRAPPC3-206ENST00000469757 C8orf87E5RJ46 101 aa4.38□□□□□ -1.71
TRAPPC3-206ENST00000469757 DSCR10P59022 87 aa4.38□□□□□ -1.71
TRAPPC3-206ENST00000469757 LINC00313P59037 77 aa4.37□□□□□ -1.71
TRAPPC3-206ENST00000469757 DEFB116Q30KQ4 102 aa4.37□□□□□ -1.71
TRAPPC3-206ENST00000469757 PCP4L1A6NKN8 68 aa4.36□□□□□ -1.71
TRAPPC3-206ENST00000469757 A8MWP4 228 aa4.36□□□□□ -1.71
TRAPPC3-206ENST00000469757 LCE2CQ5TA81 110 aa4.36□□□□□ -1.71
TRAPPC3-206ENST00000469757 NOTCH2NLQ7Z3S9 236 aa4.36□□□□□ -1.71
TRAPPC3-206ENST00000469757 FAT4Q6V0I7 4981 aa4.36□□□□□ -1.71
TRAPPC3-206ENST00000469757 IGHV6-1A0A0B4J1U7 121 aa4.35□□□□□ -1.71
TRAPPC3-206ENST00000469757 ATP11AUNQ6ZP68 121 aa4.34□□□□□ -1.71
TRAPPC3-206ENST00000469757 GTF2H5Q6ZYL4 71 aa4.34□□□□□ -1.71
TRAPPC3-206ENST00000469757 IGKV3D-7A0A0C4DH55 119 aa4.33□□□□□ -1.72
TRAPPC3-206ENST00000469757 NDUFB1O75438 58 aa4.32□□□□□ -1.72
TRAPPC3-206ENST00000469757 NREPQ16612 68 aa4.32□□□□□ -1.72
TRAPPC3-206ENST00000469757 F8W1H4 67 aa4.31□□□□□ -1.72
TRAPPC3-206ENST00000469757 PRR15Q8IV56 129 aa4.31□□□□□ -1.72
TRAPPC3-206ENST00000469757 Q8N9P0 234 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC3-206ENST00000469757 Q6ZVQ6 151 aa4.3□□□□□ -1.72
TRAPPC3-206ENST00000469757 C8orf17Q9NRJ1 99 aa4.3□□□□□ -1.72
TRAPPC3-206ENST00000469757 MMP24-AS1A0A0U1RRL7 71 aa4.29□□□□□ -1.72
TRAPPC3-206ENST00000469757 K7EQZ3 153 aa4.29□□□□□ -1.72
TRAPPC3-206ENST00000469757 MT1HP80294 61 aa4.28□□□□□ -1.72
TRAPPC3-206ENST00000469757 BPY2O14599 106 aa4.27□□□□□ -1.73
TRAPPC3-206ENST00000469757 LINC00846Q9NV44 126 aa4.27□□□□□ -1.73
TRAPPC3-206ENST00000469757 ETDBQ3ZM63 59 aa4.26□□□□□ -1.73
TRAPPC3-206ENST00000469757 TMEM254Q8TBM7 123 aa4.26□□□□□ -1.73
TRAPPC3-206ENST00000469757 ZCCHC13Q8WW36 166 aaKnown RBP4.26□□□□□ -1.73
TRAPPC3-206ENST00000469757 MPLKIPQ8TAP9 179 aa4.25□□□□□ -1.73
TRAPPC3-206ENST00000469757 UBL5Q9BZL1 73 aa4.25□□□□□ -1.73
TRAPPC3-206ENST00000469757 FLGP20930 4061 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC3-206ENST00000469757 MRPL34Q9BQ48 92 aaKnown RBP4.24□□□□□ -1.73
TRAPPC3-206ENST00000469757 hDV103S1A0JD37 113 aa4.23□□□□□ -1.73
TRAPPC3-206ENST00000469757 HRES1P13985 223 aa4.23□□□□□ -1.73
TRAPPC3-206ENST00000469757 FAM240AA0A1B0GVK7 77 aa4.22□□□□□ -1.73
TRAPPC3-206ENST00000469757 COX6B2Q6YFQ2 88 aa4.22□□□□□ -1.73
TRAPPC3-206ENST00000469757 Q8N9L7 120 aa4.22□□□□□ -1.73
TRAPPC3-206ENST00000469757 CXCL6P80162 114 aa4.21□□□□□ -1.74
TRAPPC3-206ENST00000469757 ACYP1P07311 99 aa4.19□□□□□ -1.74
TRAPPC3-206ENST00000469757 LORP23490 312 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC3-206ENST00000469757 CASC2Q6XLA1 102 aa4.19□□□□□ -1.74
TRAPPC3-206ENST00000469757 HCG22E2RYF7 251 aa4.18□□□□□ -1.74
TRAPPC3-206ENST00000469757 SPINK7P58062 85 aa4.18□□□□□ -1.74
TRAPPC3-206ENST00000469757 A0A1B0GV90 55 aa4.17□□□□□ -1.74
TRAPPC3-206ENST00000469757 KRTAP10-6P60371 365 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC3-206ENST00000469757 ATP5EP2Q5VTU8 51 aa4.17□□□□□ -1.74
TRAPPC3-206ENST00000469757 WFDC13Q8IUB5 93 aa4.16□□□□□ -1.74
TRAPPC3-206ENST00000469757 RBM12B-AS1Q9P1G2 102 aa4.16□□□□□ -1.74
TRAPPC3-206ENST00000469757 NDUFS5O43920 106 aa4.14□□□□□ -1.75
TRAPPC3-206ENST00000469757 KRTAP9-2Q9BYQ4 174 aa4.14□□□□□ -1.75
TRAPPC3-206ENST00000469757 M0R2T5 61 aa4.13□□□□□ -1.75
TRAPPC3-206ENST00000469757 LCE2DQ5TA82 110 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC3-206ENST00000469757 Q5W150 140 aa4.13□□□□□ -1.75
TRAPPC3-206ENST00000469757 C7orf65Q6ZTY9 151 aa4.12□□□□□ -1.75
TRAPPC3-206ENST00000469757 FAM236DA0A1B0GTK5 79 aa4.11□□□□□ -1.75
TRAPPC3-206ENST00000469757 FAM236CP0DP71 79 aa4.11□□□□□ -1.75
TRAPPC3-206ENST00000469757 TP53AIP1Q9HCN2 124 aa4.1□□□□□ -1.75
TRAPPC3-206ENST00000469757 LINC00643Q86TS7 51 aa4.09□□□□□ -1.75
TRAPPC3-206ENST00000469757 IGKV2D-30A0A075B6S6 120 aa4.08□□□□□ -1.76
TRAPPC3-206ENST00000469757 IGKV2-30P06310 120 aa4.08□□□□□ -1.76
TRAPPC3-206ENST00000469757 KRTAP9-8Q9BYQ0 159 aa4.07□□□□□ -1.76
TRAPPC3-206ENST00000469757 TRAV22A0A0B4J277 110 aa4.04□□□□□ -1.76
TRAPPC3-206ENST00000469757 J3QR89 54 aa4.04□□□□□ -1.76
TRAPPC3-206ENST00000469757 MT2AP02795 61 aa4.03□□□□□ -1.76
TRAPPC3-206ENST00000469757 HIST1H4AP62805 103 aaKnown RBP4.03□□□□□ -1.76
TRAPPC3-206ENST00000469757 H1FX-AS1Q4G0G2 97 aa4.03□□□□□ -1.76
TRAPPC3-206ENST00000469757 A0A087WVE0 104 aa4.01□□□□□ -1.77
TRAPPC3-206ENST00000469757 LOC101927531A0A1B0GV80 90 aa4□□□□□ -1.77
TRAPPC3-206ENST00000469757 UQCRQO14949 82 aa4□□□□□ -1.77
TRAPPC3-206ENST00000469757 MT1FP04733 61 aa4□□□□□ -1.77
TRAPPC3-206ENST00000469757 C4orf26Q17RF5 130 aa4□□□□□ -1.77
TRAPPC3-206ENST00000469757 ATOX1O00244 68 aa3.99□□□□□ -1.77
TRAPPC3-206ENST00000469757 KRTAP3-1Q9BYR8 98 aa3.98□□□□□ -1.77
TRAPPC3-206ENST00000469757 OCR1Q9BZK8 76 aa3.98□□□□□ -1.77
TRAPPC3-206ENST00000469757 CYP4F30PQ9H0H9 118 aa3.98□□□□□ -1.77
TRAPPC3-206ENST00000469757 FSIP2Q5CZC0 6907 aa3.98□□□□□ -1.77
TRAPPC3-206ENST00000469757 KRTAP9-6A0A140TA67 174 aa3.97□□□□□ -1.77
TRAPPC3-206ENST00000469757 K7ERU9 68 aa3.96□□□□□ -1.78
TRAPPC3-206ENST00000469757 H0Y9P7 68 aa3.95□□□□□ -1.78
TRAPPC3-206ENST00000469757 C1orf64Q8NEQ6 169 aa3.94□□□□□ -1.78
TRAPPC3-206ENST00000469757 KRTAP9-3Q9BYQ3 159 aa3.94□□□□□ -1.78
TRAPPC3-206ENST00000469757 IMUPQ9GZP8 106 aa3.94□□□□□ -1.78
TRAPPC3-206ENST00000469757 CRCT1Q9UGL9 99 aa3.93□□□□□ -1.78
TRAPPC3-206ENST00000469757 KRTAP10-10P60014 251 aa3.92□□□□□ -1.78
TRAPPC3-206ENST00000469757 S4R3F8 94 aa3.91□□□□□ -1.78
TRAPPC3-206ENST00000469757 H3BPC8 53 aa3.9□□□□□ -1.79
TRAPPC3-206ENST00000469757 MT-ATP8P03928 68 aa3.9□□□□□ -1.79
TRAPPC3-206ENST00000469757 C5orf47Q569G3 176 aa3.9□□□□□ -1.79
TRAPPC3-206ENST00000469757 LCE2BO14633 110 aa3.89□□□□□ -1.79
TRAPPC3-206ENST00000469757 MP68P56378 58 aa3.89□□□□□ -1.79
TRAPPC3-206ENST00000469757 LCA10Q71F78 164 aa3.89□□□□□ -1.79
TRAPPC3-206ENST00000469757 A8MUN3 132 aa3.88□□□□□ -1.79
TRAPPC3-206ENST00000469757 LINC00208Q96KT6 92 aa3.88□□□□□ -1.79
TRAPPC3-206ENST00000469757 KLKP1Q107X0 134 aa3.87□□□□□ -1.79
TRAPPC3-206ENST00000469757 KRTAP3-3Q9BYR6 98 aa3.87□□□□□ -1.79
TRAPPC3-206ENST00000469757 CSAG1Q6PB30 78 aa3.86□□□□□ -1.79
TRAPPC3-206ENST00000469757 FAM236AA0A1B0GUQ0 79 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms