RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 ACYP1P07311 99 aa12.54□□□□□ -0.4
SREBF1-208ENST00000469356 LINC00846Q9NV44 126 aa12.54□□□□□ -0.4
SREBF1-208ENST00000469356 IGHV6-1A0A0B4J1U7 121 aa12.53□□□□□ -0.4
SREBF1-208ENST00000469356 BPY2O14599 106 aa12.53□□□□□ -0.4
SREBF1-208ENST00000469356 A8MWP4 228 aa12.52□□□□□ -0.41
SREBF1-208ENST00000469356 SEC61BP60468 96 aaKnown RBP12.51□□□□□ -0.41
SREBF1-208ENST00000469356 DSCR10P59022 87 aa12.49□□□□□ -0.41
SREBF1-208ENST00000469356 FAM240AA0A1B0GVK7 77 aa12.47□□□□□ -0.41
SREBF1-208ENST00000469356 J3QR89 54 aa12.44□□□□□ -0.42
SREBF1-208ENST00000469356 PRR15Q8IV56 129 aa12.43□□□□□ -0.42
SREBF1-208ENST00000469356 IGKV3D-7A0A0C4DH55 119 aa12.42□□□□□ -0.42
SREBF1-208ENST00000469356 RPL37P61927 97 aaKnown RBP12.42□□□□□ -0.42
SREBF1-208ENST00000469356 Q75L30 129 aa12.4□□□□□ -0.42
SREBF1-208ENST00000469356 C8orf17Q9NRJ1 99 aa12.38□□□□□ -0.43
SREBF1-208ENST00000469356 C20orf166-AS1Q96NR2 134 aa12.37□□□□□ -0.43
SREBF1-208ENST00000469356 K7EQZ3 153 aa12.36□□□□□ -0.43
SREBF1-208ENST00000469356 ATP11AUNQ6ZP68 121 aa12.36□□□□□ -0.43
SREBF1-208ENST00000469356 NOTCH2NLQ7Z3S9 236 aa12.36□□□□□ -0.43
SREBF1-208ENST00000469356 MUC17Q685J3 4493 aa12.35□□□□□ -0.43
SREBF1-208ENST00000469356 A8MUU9 505 aa12.35□□□□□ -0.43
SREBF1-208ENST00000469356 CXCL6P80162 114 aa12.35□□□□□ -0.43
SREBF1-208ENST00000469356 UBR4Q5T4S7 5183 aa12.34□□□□□ -0.43
SREBF1-208ENST00000469356 KRTAP16-1A8MUX0 517 aa12.33□□□□□ -0.44
SREBF1-208ENST00000469356 PCOTHQ58A44 107 aa12.31□□□□□ -0.44
SREBF1-208ENST00000469356 ATP5EP2Q5VTU8 51 aa12.28□□□□□ -0.44
SREBF1-208ENST00000469356 TMEM254Q8TBM7 123 aa12.27□□□□□ -0.45
SREBF1-208ENST00000469356 MMP24-AS1A0A0U1RRL7 71 aa12.26□□□□□ -0.45
SREBF1-208ENST00000469356 hDV103S1A0JD37 113 aa12.26□□□□□ -0.45
SREBF1-208ENST00000469356 Q8N9L7 120 aa12.26□□□□□ -0.45
SREBF1-208ENST00000469356 MRPL34Q9BQ48 92 aaKnown RBP12.24□□□□□ -0.45
SREBF1-208ENST00000469356 LINC00643Q86TS7 51 aa12.23□□□□□ -0.45
SREBF1-208ENST00000469356 Q8N9P0 234 aaPredicted RBP12.22□□□□□ -0.45
SREBF1-208ENST00000469356 K7ERU9 68 aa12.2□□□□□ -0.46
SREBF1-208ENST00000469356 CASC2Q6XLA1 102 aa12.2□□□□□ -0.46
SREBF1-208ENST00000469356 RNF213Q63HN8 5207 aa12.17□□□□□ -0.46
SREBF1-208ENST00000469356 HCG22E2RYF7 251 aa12.17□□□□□ -0.46
SREBF1-208ENST00000469356 WFDC13Q8IUB5 93 aa12.17□□□□□ -0.46
SREBF1-208ENST00000469356 NDUFS5O43920 106 aa12.14□□□□□ -0.47
SREBF1-208ENST00000469356 A0A0U1RQV1 116 aa12.12□□□□□ -0.47
SREBF1-208ENST00000469356 ZCCHC13Q8WW36 166 aaKnown RBP12.11□□□□□ -0.47
SREBF1-208ENST00000469356 HIST1H4AP62805 103 aaKnown RBP12.1□□□□□ -0.47
SREBF1-208ENST00000469356 KRTAP4-1Q9BYQ7 146 aa12.05□□□□□ -0.48
SREBF1-208ENST00000469356 TP53AIP1Q9HCN2 124 aa11.98□□□□□ -0.49
SREBF1-208ENST00000469356 MUC2Q02817 5179 aa11.96□□□□□ -0.49
SREBF1-208ENST00000469356 A0A087WVE0 104 aa11.89□□□□□ -0.51
SREBF1-208ENST00000469356 IMUPQ9GZP8 106 aa11.88□□□□□ -0.51
SREBF1-208ENST00000469356 SPINK7P58062 85 aa11.86□□□□□ -0.51
SREBF1-208ENST00000469356 Q5W150 140 aa11.84□□□□□ -0.51
SREBF1-208ENST00000469356 COX6B2Q6YFQ2 88 aa11.82□□□□□ -0.52
SREBF1-208ENST00000469356 RBM12B-AS1Q9P1G2 102 aa11.8□□□□□ -0.52
SREBF1-208ENST00000469356 MT-ATP8P03928 68 aa11.79□□□□□ -0.52
SREBF1-208ENST00000469356 C7orf65Q6ZTY9 151 aa11.79□□□□□ -0.52
SREBF1-208ENST00000469356 UQCRQO14949 82 aa11.78□□□□□ -0.52
SREBF1-208ENST00000469356 IGKV2D-30A0A075B6S6 120 aa11.77□□□□□ -0.53
SREBF1-208ENST00000469356 IGKV2-30P06310 120 aa11.77□□□□□ -0.53
SREBF1-208ENST00000469356 SCGB1A1P11684 91 aa11.76□□□□□ -0.53
SREBF1-208ENST00000469356 HRES1P13985 223 aa11.74□□□□□ -0.53
SREBF1-208ENST00000469356 TRAV22A0A0B4J277 110 aa11.73□□□□□ -0.53
SREBF1-208ENST00000469356 FAM236DA0A1B0GTK5 79 aa11.72□□□□□ -0.53
SREBF1-208ENST00000469356 FAM236CP0DP71 79 aa11.72□□□□□ -0.53
SREBF1-208ENST00000469356 FAT4Q6V0I7 4981 aa11.71□□□□□ -0.54
SREBF1-208ENST00000469356 ATOX1O00244 68 aa11.68□□□□□ -0.54
SREBF1-208ENST00000469356 KRTAP19-2Q3LHN2 52 aa11.67□□□□□ -0.54
SREBF1-208ENST00000469356 MPLKIPQ8TAP9 179 aa11.66□□□□□ -0.54
SREBF1-208ENST00000469356 LOC101927531A0A1B0GV80 90 aa11.63□□□□□ -0.55
SREBF1-208ENST00000469356 H0Y9P7 68 aa11.63□□□□□ -0.55
SREBF1-208ENST00000469356 OCR1Q9BZK8 76 aa11.63□□□□□ -0.55
SREBF1-208ENST00000469356 LCE2CQ5TA81 110 aa11.62□□□□□ -0.55
SREBF1-208ENST00000469356 MP68P56378 58 aa11.61□□□□□ -0.55
SREBF1-208ENST00000469356 SMIM20Q8N5G0 67 aa11.6□□□□□ -0.55
SREBF1-208ENST00000469356 FAM236AA0A1B0GUQ0 79 aa11.6□□□□□ -0.55
SREBF1-208ENST00000469356 FAM236BA0A1B0GV22 79 aa11.6□□□□□ -0.55
SREBF1-208ENST00000469356 C5orf47Q569G3 176 aa11.6□□□□□ -0.55
SREBF1-208ENST00000469356 LCE2AQ5TA79 106 aaPredicted RBP11.54□□□□□ -0.56
SREBF1-208ENST00000469356 CYP4F30PQ9H0H9 118 aa11.54□□□□□ -0.56
SREBF1-208ENST00000469356 H3BPC8 53 aa11.52□□□□□ -0.57
SREBF1-208ENST00000469356 C1orf64Q8NEQ6 169 aa11.52□□□□□ -0.57
SREBF1-208ENST00000469356 LINC00208Q96KT6 92 aa11.51□□□□□ -0.57
SREBF1-208ENST00000469356 MT1HP80294 61 aa11.5□□□□□ -0.57
SREBF1-208ENST00000469356 FLGP20930 4061 aaPredicted RBP11.49□□□□□ -0.57
SREBF1-208ENST00000469356 TRAV7A0A075B6U4 112 aa11.48□□□□□ -0.57
SREBF1-208ENST00000469356 M0R2T5 61 aa11.48□□□□□ -0.57
SREBF1-208ENST00000469356 C4orf26Q17RF5 130 aa11.46□□□□□ -0.57
SREBF1-208ENST00000469356 H1FX-AS1Q4G0G2 97 aa11.41□□□□□ -0.58
SREBF1-208ENST00000469356 SERP2Q8N6R1 65 aa11.31□□□□□ -0.6
SREBF1-208ENST00000469356 KLKP1Q107X0 134 aa11.27□□□□□ -0.61
SREBF1-208ENST00000469356 KRTAP3-1Q9BYR8 98 aa11.23□□□□□ -0.61
SREBF1-208ENST00000469356 A8MUN3 132 aa11.22□□□□□ -0.61
SREBF1-208ENST00000469356 KRTAP10-6P60371 365 aaPredicted RBP11.21□□□□□ -0.61
SREBF1-208ENST00000469356 S4R3F8 94 aa11.17□□□□□ -0.62
SREBF1-208ENST00000469356 C20orf197Q8N268 126 aa11.15□□□□□ -0.62
SREBF1-208ENST00000469356 LORP23490 312 aaPredicted RBP11.14□□□□□ -0.63
SREBF1-208ENST00000469356 COX7CP15954 63 aa11.13□□□□□ -0.63
SREBF1-208ENST00000469356 SNURFQ9Y675 71 aa11.12□□□□□ -0.63
SREBF1-208ENST00000469356 ANAPC13Q9BS18 74 aa11.08□□□□□ -0.64
SREBF1-208ENST00000469356 CSAG1Q6PB30 78 aa11.05□□□□□ -0.64
SREBF1-208ENST00000469356 LCA10Q71F78 164 aa11.04□□□□□ -0.64
SREBF1-208ENST00000469356 DMAC1Q96GE9 116 aa11.03□□□□□ -0.64
SREBF1-208ENST00000469356 NDUFC1O43677 76 aa10.98□□□□□ -0.65
SREBF1-208ENST00000469356 SPANXA2-OT1Q8N9U9 137 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms