RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 MTURNQ8N3F0 131 aa5.89□□□□□ -1.47
HDAC3-204ENST00000469207 TMEM256-PLSCR3K7ERE1 68 aa5.88□□□□□ -1.47
HDAC3-204ENST00000469207 PSMB2P49721 201 aa5.88□□□□□ -1.47
HDAC3-204ENST00000469207 TMEM238LA0A1B0GVL6 79 aa5.87□□□□□ -1.47
HDAC3-204ENST00000469207 A6NJY4 79 aa5.87□□□□□ -1.47
HDAC3-204ENST00000469207 C8orf87E5RJ46 101 aa5.87□□□□□ -1.47
HDAC3-204ENST00000469207 Q8N9P0 234 aaPredicted RBP5.87□□□□□ -1.47
HDAC3-204ENST00000469207 VAMP8Q9BV40 100 aa5.87□□□□□ -1.47
HDAC3-204ENST00000469207 LINC00846Q9NV44 126 aa5.86□□□□□ -1.47
HDAC3-204ENST00000469207 A8MWP4 228 aa5.83□□□□□ -1.48
HDAC3-204ENST00000469207 S100A1P23297 94 aa5.83□□□□□ -1.48
HDAC3-204ENST00000469207 UBE2V1Q13404 147 aa5.83□□□□□ -1.48
HDAC3-204ENST00000469207 WFDC13Q8IUB5 93 aa5.83□□□□□ -1.48
HDAC3-204ENST00000469207 H3BQ85 93 aa5.82□□□□□ -1.48
HDAC3-204ENST00000469207 RBM3P98179 157 aaKnown RBP5.81□□□□□ -1.48
HDAC3-204ENST00000469207 COX6CP09669 75 aa5.8□□□□□ -1.48
HDAC3-204ENST00000469207 KRTAP6-3Q3LI67 103 aa5.8□□□□□ -1.48
HDAC3-204ENST00000469207 LYRM7Q5U5X0 104 aa5.79□□□□□ -1.48
HDAC3-204ENST00000469207 DSCR8Q96T75 97 aa5.79□□□□□ -1.48
HDAC3-204ENST00000469207 HSD52Q0P140 79 aa5.78□□□□□ -1.48
HDAC3-204ENST00000469207 Q6ZQT0 140 aa5.78□□□□□ -1.48
HDAC3-204ENST00000469207 J3KT08 172 aa5.77□□□□□ -1.49
HDAC3-204ENST00000469207 C8orf17Q9NRJ1 99 aa5.77□□□□□ -1.49
HDAC3-204ENST00000469207 C9JAW5 83 aa5.76□□□□□ -1.49
HDAC3-204ENST00000469207 BAALC-AS2P0C853 105 aa5.76□□□□□ -1.49
HDAC3-204ENST00000469207 SCGB1C2P0DMR2 95 aa5.76□□□□□ -1.49
HDAC3-204ENST00000469207 IGKV3D-7A0A0C4DH55 119 aa5.75□□□□□ -1.49
HDAC3-204ENST00000469207 NDUFB1O75438 58 aa5.75□□□□□ -1.49
HDAC3-204ENST00000469207 TMA7Q9Y2S6 64 aaKnown RBP5.73□□□□□ -1.49
HDAC3-204ENST00000469207 PYY3Q5JQD4 70 aa5.72□□□□□ -1.49
HDAC3-204ENST00000469207 Q6ZVQ6 151 aa5.72□□□□□ -1.49
HDAC3-204ENST00000469207 H1FX-AS1Q4G0G2 97 aa5.71□□□□□ -1.5
HDAC3-204ENST00000469207 MUC12Q9UKN1 5478 aa5.69□□□□□ -1.5
HDAC3-204ENST00000469207 C21orf62-AS1Q17RA5 79 aa5.67□□□□□ -1.5
HDAC3-204ENST00000469207 PRR15Q8IV56 129 aa5.67□□□□□ -1.5
HDAC3-204ENST00000469207 NAA38Q9BRA0 125 aaKnown RBP5.66□□□□□ -1.5
HDAC3-204ENST00000469207 MMP24-AS1A0A0U1RRL7 71 aa5.65□□□□□ -1.5
HDAC3-204ENST00000469207 MRPL34Q9BQ48 92 aaKnown RBP5.65□□□□□ -1.5
HDAC3-204ENST00000469207 UQCR10Q9UDW1 63 aa5.65□□□□□ -1.5
HDAC3-204ENST00000469207 C14orf132Q9NPU4 83 aa5.64□□□□□ -1.51
HDAC3-204ENST00000469207 IGKV2D-30A0A075B6S6 120 aa5.63□□□□□ -1.51
HDAC3-204ENST00000469207 LOC110117498A0A087WWA1 95 aa5.63□□□□□ -1.51
HDAC3-204ENST00000469207 NDUFS5O43920 106 aa5.63□□□□□ -1.51
HDAC3-204ENST00000469207 IGKV2-30P06310 120 aa5.63□□□□□ -1.51
HDAC3-204ENST00000469207 Q5W150 140 aa5.63□□□□□ -1.51
HDAC3-204ENST00000469207 TMEM254Q8TBM7 123 aa5.63□□□□□ -1.51
HDAC3-204ENST00000469207 JMJD7-PLA2G4BH0Y9G9 81 aa5.62□□□□□ -1.51
HDAC3-204ENST00000469207 NREPQ16612 68 aa5.62□□□□□ -1.51
HDAC3-204ENST00000469207 NEBP20929 6669 aa5.62□□□□□ -1.51
HDAC3-204ENST00000469207 K7EQZ3 153 aa5.6□□□□□ -1.51
HDAC3-204ENST00000469207 ATXN8Q156A1 80 aa5.6□□□□□ -1.51
HDAC3-204ENST00000469207 A0A1B0GW54 56 aa5.59□□□□□ -1.51
HDAC3-204ENST00000469207 hDV103S1A0JD37 113 aa5.59□□□□□ -1.51
HDAC3-204ENST00000469207 MT1BP07438 61 aa5.58□□□□□ -1.52
HDAC3-204ENST00000469207 A6NN06 94 aa5.57□□□□□ -1.52
HDAC3-204ENST00000469207 C4orf26Q17RF5 130 aa5.57□□□□□ -1.52
HDAC3-204ENST00000469207 PDE6GP18545 87 aa5.56□□□□□ -1.52
HDAC3-204ENST00000469207 C5orf47Q569G3 176 aa5.56□□□□□ -1.52
HDAC3-204ENST00000469207 KRTAP3-3Q9BYR6 98 aa5.56□□□□□ -1.52
HDAC3-204ENST00000469207 KRTAP3-2Q9BYR7 98 aa5.56□□□□□ -1.52
HDAC3-204ENST00000469207 C7orf65Q6ZTY9 151 aa5.54□□□□□ -1.52
HDAC3-204ENST00000469207 SVIPQ8NHG7 77 aa5.54□□□□□ -1.52
HDAC3-204ENST00000469207 FAM236AA0A1B0GUQ0 79 aa5.53□□□□□ -1.52
HDAC3-204ENST00000469207 FAM236BA0A1B0GV22 79 aa5.53□□□□□ -1.52
HDAC3-204ENST00000469207 Q8N9L7 120 aa5.51□□□□□ -1.53
HDAC3-204ENST00000469207 KRTAP3-1Q9BYR8 98 aa5.51□□□□□ -1.53
HDAC3-204ENST00000469207 Q5VV11 94 aa5.5□□□□□ -1.53
HDAC3-204ENST00000469207 HCG22E2RYF7 251 aa5.49□□□□□ -1.53
HDAC3-204ENST00000469207 KRTAP19-8Q3LI54 63 aa5.49□□□□□ -1.53
HDAC3-204ENST00000469207 KRTAP20-1Q3LI63 56 aa5.49□□□□□ -1.53
HDAC3-204ENST00000469207 BPY2O14599 106 aa5.48□□□□□ -1.53
HDAC3-204ENST00000469207 MDN1Q9NU22 5596 aa5.47□□□□□ -1.53
HDAC3-204ENST00000469207 KRTAP10-5P60370 271 aa5.47□□□□□ -1.53
HDAC3-204ENST00000469207 SPRR2GQ9BYE4 73 aa5.47□□□□□ -1.53
HDAC3-204ENST00000469207 CASC2Q6XLA1 102 aa5.46□□□□□ -1.54
HDAC3-204ENST00000469207 KMT2DO14686 5537 aa5.46□□□□□ -1.54
HDAC3-204ENST00000469207 M0R143 59 aa5.45□□□□□ -1.54
HDAC3-204ENST00000469207 LCA10Q71F78 164 aa5.44□□□□□ -1.54
HDAC3-204ENST00000469207 S4R3F8 94 aa5.44□□□□□ -1.54
HDAC3-204ENST00000469207 KRTAP5-9P26371 169 aa5.42□□□□□ -1.54
HDAC3-204ENST00000469207 CSAG1Q6PB30 78 aa5.42□□□□□ -1.54
HDAC3-204ENST00000469207 C1orf64Q8NEQ6 169 aa5.41□□□□□ -1.54
HDAC3-204ENST00000469207 CXCL6P80162 114 aa5.4□□□□□ -1.54
HDAC3-204ENST00000469207 BATFQ16520 125 aa5.39□□□□□ -1.55
HDAC3-204ENST00000469207 H3BT86 120 aa5.38□□□□□ -1.55
HDAC3-204ENST00000469207 KLKP1Q107X0 134 aa5.37□□□□□ -1.55
HDAC3-204ENST00000469207 TSTD3H0UI37 97 aa5.36□□□□□ -1.55
HDAC3-204ENST00000469207 A0A087WVE0 104 aa5.33□□□□□ -1.56
HDAC3-204ENST00000469207 C9orf118A6NHY6 69 aa5.33□□□□□ -1.56
HDAC3-204ENST00000469207 TAX1BP3O14907 124 aa5.32□□□□□ -1.56
HDAC3-204ENST00000469207 IMUPQ9GZP8 106 aa5.32□□□□□ -1.56
HDAC3-204ENST00000469207 A0A1W2PPM0 123 aa5.31□□□□□ -1.56
HDAC3-204ENST00000469207 SMCPP49901 116 aaPredicted RBP5.3□□□□□ -1.56
HDAC3-204ENST00000469207 KRTAP2-3P0C7H8 128 aa5.28□□□□□ -1.56
HDAC3-204ENST00000469207 KRTAP2-4Q9BYR9 128 aa5.28□□□□□ -1.56
HDAC3-204ENST00000469207 SPRR2FQ96RM1 72 aa5.24□□□□□ -1.57
HDAC3-204ENST00000469207 UBL5Q9BZL1 73 aa5.24□□□□□ -1.57
HDAC3-204ENST00000469207 SMIM6P0DI80 62 aa5.22□□□□□ -1.57
HDAC3-204ENST00000469207 SPRR2EP22531 72 aa5.22□□□□□ -1.57
HDAC3-204ENST00000469207 SPRR2BP35325 72 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms