RNA–Protein interactions for RNA: ENST00000462322.2

SMKR1-201, Transcript of small lysine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMKR1, Length 1,035 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-201ENST00000462322 J3KT08 172 aa12.38□□□□□ -0.43
SMKR1-201ENST00000462322 PDE6GP18545 87 aa12.37□□□□□ -0.43
SMKR1-201ENST00000462322 C8orf87E5RJ46 101 aa12.36□□□□□ -0.43
SMKR1-201ENST00000462322 C14orf132Q9NPU4 83 aa12.36□□□□□ -0.43
SMKR1-201ENST00000462322 C9orf118A6NHY6 69 aa12.35□□□□□ -0.43
SMKR1-201ENST00000462322 A0A1B0GW54 56 aa12.34□□□□□ -0.43
SMKR1-201ENST00000462322 TAX1BP3O14907 124 aa12.32□□□□□ -0.44
SMKR1-201ENST00000462322 FLGP20930 4061 aaPredicted RBP12.31□□□□□ -0.44
SMKR1-201ENST00000462322 A0A1W2PPM0 123 aa12.29□□□□□ -0.44
SMKR1-201ENST00000462322 NDUFB1O75438 58 aa12.29□□□□□ -0.44
SMKR1-201ENST00000462322 KRTAP10-6P60371 365 aaPredicted RBP12.29□□□□□ -0.44
SMKR1-201ENST00000462322 LCE2DQ5TA82 110 aaPredicted RBP12.29□□□□□ -0.44
SMKR1-201ENST00000462322 LORP23490 312 aaPredicted RBP12.27□□□□□ -0.45
SMKR1-201ENST00000462322 H3BT86 120 aa12.25□□□□□ -0.45
SMKR1-201ENST00000462322 MTURNQ8N3F0 131 aa12.23□□□□□ -0.45
SMKR1-201ENST00000462322 A8MWP4 228 aa12.22□□□□□ -0.45
SMKR1-201ENST00000462322 NREPQ16612 68 aa12.21□□□□□ -0.45
SMKR1-201ENST00000462322 IGKV3D-7A0A0C4DH55 119 aa12.17□□□□□ -0.46
SMKR1-201ENST00000462322 C8orf17Q9NRJ1 99 aa12.17□□□□□ -0.46
SMKR1-201ENST00000462322 ZCCHC13Q8WW36 166 aaKnown RBP12.15□□□□□ -0.46
SMKR1-201ENST00000462322 KRTAP9-6A0A140TA67 174 aa12.14□□□□□ -0.47
SMKR1-201ENST00000462322 SPCS1Q9Y6A9 102 aa12.14□□□□□ -0.47
SMKR1-201ENST00000462322 Q8N9P0 234 aaPredicted RBP12.13□□□□□ -0.47
SMKR1-201ENST00000462322 FAM236DA0A1B0GTK5 79 aa12.12□□□□□ -0.47
SMKR1-201ENST00000462322 FAM236CP0DP71 79 aa12.12□□□□□ -0.47
SMKR1-201ENST00000462322 HRES1P13985 223 aa12.11□□□□□ -0.47
SMKR1-201ENST00000462322 PRR15Q8IV56 129 aa12.11□□□□□ -0.47
SMKR1-201ENST00000462322 RBM12B-AS1Q9P1G2 102 aa12.1□□□□□ -0.47
SMKR1-201ENST00000462322 COL5A1-AS1Q5SY13 56 aa12.08□□□□□ -0.48
SMKR1-201ENST00000462322 Q6ZVQ6 151 aa12.08□□□□□ -0.48
SMKR1-201ENST00000462322 MPLKIPQ8TAP9 179 aa12.07□□□□□ -0.48
SMKR1-201ENST00000462322 FSIP2Q5CZC0 6907 aa12.02□□□□□ -0.49
SMKR1-201ENST00000462322 SPINK7P58062 85 aa12.02□□□□□ -0.49
SMKR1-201ENST00000462322 SMCPP49901 116 aaPredicted RBP12.01□□□□□ -0.49
SMKR1-201ENST00000462322 MMP24-AS1A0A0U1RRL7 71 aa12□□□□□ -0.49
SMKR1-201ENST00000462322 K7EQZ3 153 aa12□□□□□ -0.49
SMKR1-201ENST00000462322 BPY2O14599 106 aa11.99□□□□□ -0.49
SMKR1-201ENST00000462322 TMEM254Q8TBM7 123 aa11.98□□□□□ -0.49
SMKR1-201ENST00000462322 MRPL34Q9BQ48 92 aaKnown RBP11.97□□□□□ -0.49
SMKR1-201ENST00000462322 hDV103S1A0JD37 113 aa11.94□□□□□ -0.5
SMKR1-201ENST00000462322 K7EP34 96 aa11.94□□□□□ -0.5
SMKR1-201ENST00000462322 CRCT1Q9UGL9 99 aa11.93□□□□□ -0.5
SMKR1-201ENST00000462322 PRO0461Q9UI25 63 aa11.93□□□□□ -0.5
SMKR1-201ENST00000462322 NDUFS5O43920 106 aa11.9□□□□□ -0.5
SMKR1-201ENST00000462322 KRTAP9-8Q9BYQ0 159 aa11.88□□□□□ -0.51
SMKR1-201ENST00000462322 PCP4L1A6NKN8 68 aa11.86□□□□□ -0.51
SMKR1-201ENST00000462322 WFDC13Q8IUB5 93 aa11.85□□□□□ -0.51
SMKR1-201ENST00000462322 Q8N9L7 120 aa11.85□□□□□ -0.51
SMKR1-201ENST00000462322 GTF2H5Q6ZYL4 71 aa11.82□□□□□ -0.52
SMKR1-201ENST00000462322 LINC00846Q9NV44 126 aa11.82□□□□□ -0.52
SMKR1-201ENST00000462322 UBL5Q9BZL1 73 aa11.81□□□□□ -0.52
SMKR1-201ENST00000462322 CASC2Q6XLA1 102 aa11.79□□□□□ -0.52
SMKR1-201ENST00000462322 MT2AP02795 61 aa11.74□□□□□ -0.53
SMKR1-201ENST00000462322 HCG22E2RYF7 251 aa11.72□□□□□ -0.53
SMKR1-201ENST00000462322 F8W1H4 67 aa11.72□□□□□ -0.53
SMKR1-201ENST00000462322 Q5W150 140 aa11.72□□□□□ -0.53
SMKR1-201ENST00000462322 IGKV2D-30A0A075B6S6 120 aa11.7□□□□□ -0.54
SMKR1-201ENST00000462322 IGKV2-30P06310 120 aa11.7□□□□□ -0.54
SMKR1-201ENST00000462322 ETDBQ3ZM63 59 aa11.67□□□□□ -0.54
SMKR1-201ENST00000462322 MT1FP04733 61 aa11.65□□□□□ -0.54
SMKR1-201ENST00000462322 C7orf65Q6ZTY9 151 aa11.65□□□□□ -0.54
SMKR1-201ENST00000462322 KRTAP10-10P60014 251 aa11.63□□□□□ -0.55
SMKR1-201ENST00000462322 CXCL6P80162 114 aa11.63□□□□□ -0.55
SMKR1-201ENST00000462322 H1FX-AS1Q4G0G2 97 aa11.58□□□□□ -0.56
SMKR1-201ENST00000462322 USH2AO75445 5202 aa11.56□□□□□ -0.56
SMKR1-201ENST00000462322 KRTAP9-3Q9BYQ3 159 aa11.51□□□□□ -0.57
SMKR1-201ENST00000462322 C4orf26Q17RF5 130 aa11.47□□□□□ -0.57
SMKR1-201ENST00000462322 TP53AIP1Q9HCN2 124 aa11.44□□□□□ -0.58
SMKR1-201ENST00000462322 SSPOA2VEC9 5147 aa11.43□□□□□ -0.58
SMKR1-201ENST00000462322 LCE2BO14633 110 aa11.43□□□□□ -0.58
SMKR1-201ENST00000462322 ACYP1P07311 99 aa11.41□□□□□ -0.58
SMKR1-201ENST00000462322 FAM240AA0A1B0GVK7 77 aa11.34□□□□□ -0.59
SMKR1-201ENST00000462322 ATP5EP2Q5VTU8 51 aa11.29□□□□□ -0.6
SMKR1-201ENST00000462322 C1orf64Q8NEQ6 169 aa11.28□□□□□ -0.6
SMKR1-201ENST00000462322 KRTAP3-1Q9BYR8 98 aa11.28□□□□□ -0.6
SMKR1-201ENST00000462322 HIST1H4AP62805 103 aaKnown RBP11.25□□□□□ -0.61
SMKR1-201ENST00000462322 C5orf47Q569G3 176 aa11.21□□□□□ -0.61
SMKR1-201ENST00000462322 KRTAP19-1Q8IUB9 90 aa11.21□□□□□ -0.61
SMKR1-201ENST00000462322 S4R3F8 94 aa11.21□□□□□ -0.61
SMKR1-201ENST00000462322 TRAV22A0A0B4J277 110 aa11.2□□□□□ -0.62
SMKR1-201ENST00000462322 A0A1B0GV90 55 aa11.19□□□□□ -0.62
SMKR1-201ENST00000462322 CYP4F30PQ9H0H9 118 aa11.19□□□□□ -0.62
SMKR1-201ENST00000462322 FCGBPQ9Y6R7 5405 aaPredicted RBP11.15□□□□□ -0.62
SMKR1-201ENST00000462322 LOC101927531A0A1B0GV80 90 aa11.14□□□□□ -0.63
SMKR1-201ENST00000462322 LINC00643Q86TS7 51 aa11.14□□□□□ -0.63
SMKR1-201ENST00000462322 CSAG1Q6PB30 78 aa11.12□□□□□ -0.63
SMKR1-201ENST00000462322 LCA10Q71F78 164 aa11.12□□□□□ -0.63
SMKR1-201ENST00000462322 UQCRQO14949 82 aa11.11□□□□□ -0.63
SMKR1-201ENST00000462322 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.1□□□□□ -0.63
SMKR1-201ENST00000462322 A0A087WVE0 104 aa11.08□□□□□ -0.64
SMKR1-201ENST00000462322 FAM236AA0A1B0GUQ0 79 aa11.06□□□□□ -0.64
SMKR1-201ENST00000462322 FAM236BA0A1B0GV22 79 aa11.06□□□□□ -0.64
SMKR1-201ENST00000462322 H0Y9P7 68 aa11.05□□□□□ -0.64
SMKR1-201ENST00000462322 ATOX1O00244 68 aa11.04□□□□□ -0.64
SMKR1-201ENST00000462322 KRTAP19-6Q3LI70 58 aa11.01□□□□□ -0.65
SMKR1-201ENST00000462322 KRTAP3-3Q9BYR6 98 aa10.95□□□□□ -0.66
SMKR1-201ENST00000462322 KRTAP9-7A8MTY7 169 aa10.93□□□□□ -0.66
SMKR1-201ENST00000462322 J3QR89 54 aa10.93□□□□□ -0.66
SMKR1-201ENST00000462322 LINC00208Q96KT6 92 aa10.89□□□□□ -0.67
SMKR1-201ENST00000462322 OCR1Q9BZK8 76 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms