RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 LINC00472Q9H8W2 130 aa10.77□□□□□ -0.69
SRM-202ENST00000459997 LINC00313P59037 77 aa10.74□□□□□ -0.69
SRM-202ENST00000459997 A0A1W2PPM0 123 aa10.73□□□□□ -0.69
SRM-202ENST00000459997 JMJD7-PLA2G4BH0Y9G9 81 aa10.72□□□□□ -0.69
SRM-202ENST00000459997 Q6ZQT0 140 aa10.72□□□□□ -0.69
SRM-202ENST00000459997 LOC110117498A0A087WWA1 95 aa10.69□□□□□ -0.7
SRM-202ENST00000459997 KRTAP16-1A8MUX0 517 aa10.69□□□□□ -0.7
SRM-202ENST00000459997 NOTCH2NLQ7Z3S9 236 aa10.69□□□□□ -0.7
SRM-202ENST00000459997 MTURNQ8N3F0 131 aa10.69□□□□□ -0.7
SRM-202ENST00000459997 C14orf132Q9NPU4 83 aa10.69□□□□□ -0.7
SRM-202ENST00000459997 IGHV6-1A0A0B4J1U7 121 aa10.65□□□□□ -0.7
SRM-202ENST00000459997 H3BT86 120 aa10.62□□□□□ -0.71
SRM-202ENST00000459997 PDE6GP18545 87 aa10.61□□□□□ -0.71
SRM-202ENST00000459997 C21orf62-AS1Q17RA5 79 aa10.61□□□□□ -0.71
SRM-202ENST00000459997 A0A1B0GVX0 72 aa10.59□□□□□ -0.71
SRM-202ENST00000459997 SPCS1Q9Y6A9 102 aa10.59□□□□□ -0.71
SRM-202ENST00000459997 COL5A1-AS1Q5SY13 56 aa10.58□□□□□ -0.72
SRM-202ENST00000459997 A0A1B0GW54 56 aa10.56□□□□□ -0.72
SRM-202ENST00000459997 J3KT08 172 aa10.56□□□□□ -0.72
SRM-202ENST00000459997 C8orf87E5RJ46 101 aa10.55□□□□□ -0.72
SRM-202ENST00000459997 FAM236DA0A1B0GTK5 79 aa10.54□□□□□ -0.72
SRM-202ENST00000459997 FAM236CP0DP71 79 aa10.54□□□□□ -0.72
SRM-202ENST00000459997 PCP4L1A6NKN8 68 aa10.52□□□□□ -0.73
SRM-202ENST00000459997 SMCPP49901 116 aaPredicted RBP10.52□□□□□ -0.73
SRM-202ENST00000459997 HRES1P13985 223 aa10.5□□□□□ -0.73
SRM-202ENST00000459997 KRTAP9-8Q9BYQ0 159 aa10.49□□□□□ -0.73
SRM-202ENST00000459997 RBM12B-AS1Q9P1G2 102 aa10.49□□□□□ -0.73
SRM-202ENST00000459997 NREPQ16612 68 aa10.48□□□□□ -0.73
SRM-202ENST00000459997 A8MWP4 228 aa10.47□□□□□ -0.73
SRM-202ENST00000459997 NDUFB1O75438 58 aa10.47□□□□□ -0.73
SRM-202ENST00000459997 MPLKIPQ8TAP9 179 aa10.47□□□□□ -0.73
SRM-202ENST00000459997 IGKV3D-7A0A0C4DH55 119 aa10.46□□□□□ -0.73
SRM-202ENST00000459997 K7EP34 96 aa10.46□□□□□ -0.73
SRM-202ENST00000459997 PRO0461Q9UI25 63 aa10.45□□□□□ -0.74
SRM-202ENST00000459997 C8orf17Q9NRJ1 99 aa10.43□□□□□ -0.74
SRM-202ENST00000459997 ZCCHC13Q8WW36 166 aaKnown RBP10.42□□□□□ -0.74
SRM-202ENST00000459997 PRR15Q8IV56 129 aa10.39□□□□□ -0.75
SRM-202ENST00000459997 Q8N9P0 234 aaPredicted RBP10.36□□□□□ -0.75
SRM-202ENST00000459997 SPINK7P58062 85 aa10.35□□□□□ -0.75
SRM-202ENST00000459997 K7EQZ3 153 aa10.34□□□□□ -0.75
SRM-202ENST00000459997 MT2AP02795 61 aa10.34□□□□□ -0.75
SRM-202ENST00000459997 MMP24-AS1A0A0U1RRL7 71 aa10.33□□□□□ -0.76
SRM-202ENST00000459997 Q6ZVQ6 151 aa10.33□□□□□ -0.76
SRM-202ENST00000459997 GTF2H5Q6ZYL4 71 aa10.32□□□□□ -0.76
SRM-202ENST00000459997 BPY2O14599 106 aa10.31□□□□□ -0.76
SRM-202ENST00000459997 MT1FP04733 61 aa10.26□□□□□ -0.77
SRM-202ENST00000459997 TMEM254Q8TBM7 123 aa10.26□□□□□ -0.77
SRM-202ENST00000459997 LINC00846Q9NV44 126 aa10.26□□□□□ -0.77
SRM-202ENST00000459997 Q8N9L7 120 aa10.25□□□□□ -0.77
SRM-202ENST00000459997 MRPL34Q9BQ48 92 aaKnown RBP10.25□□□□□ -0.77
SRM-202ENST00000459997 USH2AO75445 5202 aa10.25□□□□□ -0.77
SRM-202ENST00000459997 hDV103S1A0JD37 113 aa10.23□□□□□ -0.77
SRM-202ENST00000459997 F8W1H4 67 aa10.23□□□□□ -0.77
SRM-202ENST00000459997 KRTAP10-10P60014 251 aa10.23□□□□□ -0.77
SRM-202ENST00000459997 WFDC13Q8IUB5 93 aa10.22□□□□□ -0.77
SRM-202ENST00000459997 ETDBQ3ZM63 59 aa10.21□□□□□ -0.77
SRM-202ENST00000459997 UBL5Q9BZL1 73 aa10.19□□□□□ -0.78
SRM-202ENST00000459997 NDUFS5O43920 106 aa10.17□□□□□ -0.78
SRM-202ENST00000459997 KRTAP9-3Q9BYQ3 159 aa10.16□□□□□ -0.78
SRM-202ENST00000459997 SSPOA2VEC9 5147 aa10.16□□□□□ -0.78
SRM-202ENST00000459997 LCE2BO14633 110 aa10.14□□□□□ -0.79
SRM-202ENST00000459997 CASC2Q6XLA1 102 aa10.13□□□□□ -0.79
SRM-202ENST00000459997 Q5W150 140 aa10.08□□□□□ -0.8
SRM-202ENST00000459997 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.06□□□□□ -0.8
SRM-202ENST00000459997 HCG22E2RYF7 251 aa10.06□□□□□ -0.8
SRM-202ENST00000459997 KRTAP19-1Q8IUB9 90 aa10.01□□□□□ -0.81
SRM-202ENST00000459997 IGKV2D-30A0A075B6S6 120 aa9.99□□□□□ -0.81
SRM-202ENST00000459997 IGKV2-30P06310 120 aa9.99□□□□□ -0.81
SRM-202ENST00000459997 CXCL6P80162 114 aa9.99□□□□□ -0.81
SRM-202ENST00000459997 H1FX-AS1Q4G0G2 97 aa9.99□□□□□ -0.81
SRM-202ENST00000459997 KRTAP9-7A8MTY7 169 aa9.96□□□□□ -0.82
SRM-202ENST00000459997 C7orf65Q6ZTY9 151 aa9.96□□□□□ -0.82
SRM-202ENST00000459997 FCGBPQ9Y6R7 5405 aaPredicted RBP9.96□□□□□ -0.82
SRM-202ENST00000459997 A0A1B0GV90 55 aa9.95□□□□□ -0.82
SRM-202ENST00000459997 ACYP1P07311 99 aa9.91□□□□□ -0.82
SRM-202ENST00000459997 FAM240AA0A1B0GVK7 77 aa9.88□□□□□ -0.83
SRM-202ENST00000459997 C4orf26Q17RF5 130 aa9.83□□□□□ -0.84
SRM-202ENST00000459997 TP53AIP1Q9HCN2 124 aa9.8□□□□□ -0.84
SRM-202ENST00000459997 KRTAP19-6Q3LI70 58 aa9.79□□□□□ -0.84
SRM-202ENST00000459997 ATP5EP2Q5VTU8 51 aa9.78□□□□□ -0.84
SRM-202ENST00000459997 HIST1H4AP62805 103 aaKnown RBP9.75□□□□□ -0.85
SRM-202ENST00000459997 MACF1Q9UPN3 7388 aaKnown RBP9.72□□□□□ -0.85
SRM-202ENST00000459997 LINC00643Q86TS7 51 aa9.7□□□□□ -0.86
SRM-202ENST00000459997 A0A087WVE0 104 aa9.68□□□□□ -0.86
SRM-202ENST00000459997 KRTAP3-1Q9BYR8 98 aa9.68□□□□□ -0.86
SRM-202ENST00000459997 C5orf47Q569G3 176 aa9.67□□□□□ -0.86
SRM-202ENST00000459997 TRAV22A0A0B4J277 110 aa9.64□□□□□ -0.87
SRM-202ENST00000459997 C1orf64Q8NEQ6 169 aa9.63□□□□□ -0.87
SRM-202ENST00000459997 S4R3F8 94 aa9.63□□□□□ -0.87
SRM-202ENST00000459997 CYP4F30PQ9H0H9 118 aa9.62□□□□□ -0.87
SRM-202ENST00000459997 SYNE2Q8WXH0 6885 aaKnown RBP9.61□□□□□ -0.87
SRM-202ENST00000459997 FAM236AA0A1B0GUQ0 79 aa9.58□□□□□ -0.88
SRM-202ENST00000459997 FAM236BA0A1B0GV22 79 aa9.58□□□□□ -0.88
SRM-202ENST00000459997 UQCRQO14949 82 aa9.58□□□□□ -0.88
SRM-202ENST00000459997 LOC101927531A0A1B0GV80 90 aa9.55□□□□□ -0.88
SRM-202ENST00000459997 CSAG1Q6PB30 78 aa9.55□□□□□ -0.88
SRM-202ENST00000459997 LCA10Q71F78 164 aa9.55□□□□□ -0.88
SRM-202ENST00000459997 H0Y9P7 68 aa9.54□□□□□ -0.88
SRM-202ENST00000459997 J3QR89 54 aa9.54□□□□□ -0.88
SRM-202ENST00000459997 ATOX1O00244 68 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 268.7 ms