RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 Q8N9P0 234 aaPredicted RBP8.88□□□□□ -0.99
MSH6-206ENST00000455383 CEND1Q8N111 149 aa8.87□□□□□ -0.99
MSH6-206ENST00000455383 TMEM256-PLSCR3K7ERE1 68 aa8.86□□□□□ -0.99
MSH6-206ENST00000455383 NEBP20929 6669 aa8.85□□□□□ -0.99
MSH6-206ENST00000455383 DNAL4O96015 105 aa8.85□□□□□ -0.99
MSH6-206ENST00000455383 TMEM238LA0A1B0GVL6 79 aa8.82□□□□□ -1
MSH6-206ENST00000455383 A6NJY4 79 aa8.82□□□□□ -1
MSH6-206ENST00000455383 S100A6P06703 90 aa8.82□□□□□ -1
MSH6-206ENST00000455383 FXYD2P54710 66 aa8.82□□□□□ -1
MSH6-206ENST00000455383 UBE2V1Q13404 147 aa8.82□□□□□ -1
MSH6-206ENST00000455383 WFDC13Q8IUB5 93 aa8.82□□□□□ -1
MSH6-206ENST00000455383 SPATA45Q537H7 98 aa8.8□□□□□ -1
MSH6-206ENST00000455383 PAM16Q9Y3D7 125 aa8.79□□□□□ -1
MSH6-206ENST00000455383 J3KT08 172 aa8.78□□□□□ -1
MSH6-206ENST00000455383 VPS25Q9BRG1 176 aa8.75□□□□□ -1.01
MSH6-206ENST00000455383 PSMB2P49721 201 aa8.73□□□□□ -1.01
MSH6-206ENST00000455383 RBM3P98179 157 aaKnown RBP8.72□□□□□ -1.01
MSH6-206ENST00000455383 COX6CP09669 75 aa8.71□□□□□ -1.02
MSH6-206ENST00000455383 C21orf62-AS1Q17RA5 79 aa8.71□□□□□ -1.02
MSH6-206ENST00000455383 VAMP8Q9BV40 100 aa8.71□□□□□ -1.02
MSH6-206ENST00000455383 Q6ZQT0 140 aa8.7□□□□□ -1.02
MSH6-206ENST00000455383 C8orf17Q9NRJ1 99 aa8.7□□□□□ -1.02
MSH6-206ENST00000455383 K7ERJ3 54 aa8.69□□□□□ -1.02
MSH6-206ENST00000455383 NDUFB1O75438 58 aa8.69□□□□□ -1.02
MSH6-206ENST00000455383 H1FX-AS1Q4G0G2 97 aa8.69□□□□□ -1.02
MSH6-206ENST00000455383 DSCR8Q96T75 97 aa8.69□□□□□ -1.02
MSH6-206ENST00000455383 MUC12Q9UKN1 5478 aa8.67□□□□□ -1.02
MSH6-206ENST00000455383 LYRM7Q5U5X0 104 aa8.67□□□□□ -1.02
MSH6-206ENST00000455383 IGKV3D-7A0A0C4DH55 119 aa8.64□□□□□ -1.03
MSH6-206ENST00000455383 S100A1P23297 94 aa8.64□□□□□ -1.03
MSH6-206ENST00000455383 HSD52Q0P140 79 aa8.64□□□□□ -1.03
MSH6-206ENST00000455383 C9JAW5 83 aa8.63□□□□□ -1.03
MSH6-206ENST00000455383 Q6ZVQ6 151 aa8.62□□□□□ -1.03
MSH6-206ENST00000455383 A0A1B0GW54 56 aa8.56□□□□□ -1.04
MSH6-206ENST00000455383 BAALC-AS2P0C853 105 aa8.56□□□□□ -1.04
MSH6-206ENST00000455383 PRR15Q8IV56 129 aa8.54□□□□□ -1.04
MSH6-206ENST00000455383 A6NN06 94 aa8.53□□□□□ -1.04
MSH6-206ENST00000455383 TMEM254Q8TBM7 123 aa8.53□□□□□ -1.04
MSH6-206ENST00000455383 MRPL34Q9BQ48 92 aaKnown RBP8.53□□□□□ -1.04
MSH6-206ENST00000455383 MT1BP07438 61 aa8.52□□□□□ -1.05
MSH6-206ENST00000455383 SCGB1C2P0DMR2 95 aa8.52□□□□□ -1.05
MSH6-206ENST00000455383 KRTAP20-1Q3LI63 56 aa8.52□□□□□ -1.05
MSH6-206ENST00000455383 MMP24-AS1A0A0U1RRL7 71 aa8.51□□□□□ -1.05
MSH6-206ENST00000455383 LOC110117498A0A087WWA1 95 aa8.5□□□□□ -1.05
MSH6-206ENST00000455383 JMJD7-PLA2G4BH0Y9G9 81 aa8.48□□□□□ -1.05
MSH6-206ENST00000455383 KRTAP19-8Q3LI54 63 aa8.45□□□□□ -1.06
MSH6-206ENST00000455383 PDE6GP18545 87 aa8.44□□□□□ -1.06
MSH6-206ENST00000455383 KRTAP5-9P26371 169 aa8.44□□□□□ -1.06
MSH6-206ENST00000455383 IGKV2D-30A0A075B6S6 120 aa8.43□□□□□ -1.06
MSH6-206ENST00000455383 IGKV2-30P06310 120 aa8.43□□□□□ -1.06
MSH6-206ENST00000455383 C7orf65Q6ZTY9 151 aa8.43□□□□□ -1.06
MSH6-206ENST00000455383 hDV103S1A0JD37 113 aa8.42□□□□□ -1.06
MSH6-206ENST00000455383 PYY3Q5JQD4 70 aa8.42□□□□□ -1.06
MSH6-206ENST00000455383 Q5VV11 94 aa8.42□□□□□ -1.06
MSH6-206ENST00000455383 Q5W150 140 aa8.42□□□□□ -1.06
MSH6-206ENST00000455383 KRTAP10-5P60370 271 aa8.41□□□□□ -1.06
MSH6-206ENST00000455383 NREPQ16612 68 aa8.4□□□□□ -1.06
MSH6-206ENST00000455383 SPRR2GQ9BYE4 73 aa8.4□□□□□ -1.06
MSH6-206ENST00000455383 NDUFS5O43920 106 aa8.39□□□□□ -1.07
MSH6-206ENST00000455383 UQCR10Q9UDW1 63 aa8.39□□□□□ -1.07
MSH6-206ENST00000455383 K7EQZ3 153 aa8.38□□□□□ -1.07
MSH6-206ENST00000455383 C14orf132Q9NPU4 83 aa8.38□□□□□ -1.07
MSH6-206ENST00000455383 ATXN8Q156A1 80 aa8.36□□□□□ -1.07
MSH6-206ENST00000455383 KMT2DO14686 5537 aa8.36□□□□□ -1.07
MSH6-206ENST00000455383 FAM236AA0A1B0GUQ0 79 aa8.35□□□□□ -1.07
MSH6-206ENST00000455383 FAM236BA0A1B0GV22 79 aa8.35□□□□□ -1.07
MSH6-206ENST00000455383 C4orf26Q17RF5 130 aa8.35□□□□□ -1.07
MSH6-206ENST00000455383 C5orf47Q569G3 176 aa8.35□□□□□ -1.07
MSH6-206ENST00000455383 MDN1Q9NU22 5596 aa8.32□□□□□ -1.08
MSH6-206ENST00000455383 KRTAP3-1Q9BYR8 98 aa8.29□□□□□ -1.08
MSH6-206ENST00000455383 NAA38Q9BRA0 125 aaKnown RBP8.26□□□□□ -1.09
MSH6-206ENST00000455383 CSAG1Q6PB30 78 aa8.25□□□□□ -1.09
MSH6-206ENST00000455383 S4R3F8 94 aa8.23□□□□□ -1.09
MSH6-206ENST00000455383 HCG22E2RYF7 251 aa8.22□□□□□ -1.09
MSH6-206ENST00000455383 BPY2O14599 106 aa8.21□□□□□ -1.1
MSH6-206ENST00000455383 KRTAP2-3P0C7H8 128 aa8.2□□□□□ -1.1
MSH6-206ENST00000455383 KLKP1Q107X0 134 aa8.2□□□□□ -1.1
MSH6-206ENST00000455383 CASC2Q6XLA1 102 aa8.2□□□□□ -1.1
MSH6-206ENST00000455383 LCA10Q71F78 164 aa8.2□□□□□ -1.1
MSH6-206ENST00000455383 KRTAP2-4Q9BYR9 128 aa8.2□□□□□ -1.1
MSH6-206ENST00000455383 CXCL6P80162 114 aa8.18□□□□□ -1.1
MSH6-206ENST00000455383 Q8N9L7 120 aa8.15□□□□□ -1.1
MSH6-206ENST00000455383 M0R143 59 aa8.14□□□□□ -1.11
MSH6-206ENST00000455383 C1orf64Q8NEQ6 169 aa8.14□□□□□ -1.11
MSH6-206ENST00000455383 SMCPP49901 116 aaPredicted RBP8.12□□□□□ -1.11
MSH6-206ENST00000455383 H3BT86 120 aa8.07□□□□□ -1.12
MSH6-206ENST00000455383 IMUPQ9GZP8 106 aa8.07□□□□□ -1.12
MSH6-206ENST00000455383 CRIPTQ9P021 101 aa8.07□□□□□ -1.12
MSH6-206ENST00000455383 SPRR2FQ96RM1 72 aa8.01□□□□□ -1.13
MSH6-206ENST00000455383 SPRR2EP22531 72 aa8□□□□□ -1.13
MSH6-206ENST00000455383 SPRR2BP35325 72 aa8□□□□□ -1.13
MSH6-206ENST00000455383 SPRR2AP35326 72 aa8□□□□□ -1.13
MSH6-206ENST00000455383 TSTD3H0UI37 97 aa7.94□□□□□ -1.14
MSH6-206ENST00000455383 A0A087WVE0 104 aa7.91□□□□□ -1.14
MSH6-206ENST00000455383 KRTAP2-2Q9BYT5 123 aa7.91□□□□□ -1.14
MSH6-206ENST00000455383 KRTAP2-1Q9BYU5 128 aa7.91□□□□□ -1.14
MSH6-206ENST00000455383 TMA7Q9Y2S6 64 aaKnown RBP7.91□□□□□ -1.14
MSH6-206ENST00000455383 TP53AIP1Q9HCN2 124 aa7.9□□□□□ -1.14
MSH6-206ENST00000455383 C9orf118A6NHY6 69 aa7.89□□□□□ -1.15
MSH6-206ENST00000455383 LCE1AQ5T7P2 110 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms