RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 SPRR1AP35321 89 aa4.72□□□□□ -1.65
BRCC3-208ENST00000453705 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.71□□□□□ -1.65
BRCC3-208ENST00000453705 LOC101927531A0A1B0GV80 90 aa4.71□□□□□ -1.66
BRCC3-208ENST00000453705 A0A087WSZ3 146 aa4.69□□□□□ -1.66
BRCC3-208ENST00000453705 Q6ZRN7 208 aaPredicted RBP4.69□□□□□ -1.66
BRCC3-208ENST00000453705 ZCCHC13Q8WW36 166 aaKnown RBP4.69□□□□□ -1.66
BRCC3-208ENST00000453705 KRTAP1-5Q9BYS1 174 aa4.69□□□□□ -1.66
BRCC3-208ENST00000453705 ALMS1Q8TCU4 4167 aa4.69□□□□□ -1.66
BRCC3-208ENST00000453705 M0R2N4 97 aa4.69□□□□□ -1.66
BRCC3-208ENST00000453705 COX7BP24311 80 aa4.69□□□□□ -1.66
BRCC3-208ENST00000453705 SPANXA2-OT1Q8N9U9 137 aa4.69□□□□□ -1.66
BRCC3-208ENST00000453705 NBDYA0A0U1RRE5 68 aa4.68□□□□□ -1.66
BRCC3-208ENST00000453705 SPAG11AQ6PDA7 123 aa4.68□□□□□ -1.66
BRCC3-208ENST00000453705 HIGD2AQ9BW72 106 aa4.68□□□□□ -1.66
BRCC3-208ENST00000453705 TENM2Q9NT68 2774 aa4.68□□□□□ -1.66
BRCC3-208ENST00000453705 RYR3Q15413 4870 aa4.68□□□□□ -1.66
BRCC3-208ENST00000453705 STAB2Q8WWQ8 2551 aa4.67□□□□□ -1.66
BRCC3-208ENST00000453705 FAM168BA1KXE4 195 aa4.67□□□□□ -1.66
BRCC3-208ENST00000453705 IGKV4-1P06312 121 aa4.67□□□□□ -1.66
BRCC3-208ENST00000453705 ZNF861PO60384 105 aa4.66□□□□□ -1.66
BRCC3-208ENST00000453705 KRTAP7-1Q8IUC3 87 aa4.66□□□□□ -1.66
BRCC3-208ENST00000453705 PLECQ15149 4684 aaKnown RBP4.64□□□□□ -1.67
BRCC3-208ENST00000453705 IGLV5-48A0A075B6I7 105 aa4.64□□□□□ -1.67
BRCC3-208ENST00000453705 Q5W150 140 aa4.63□□□□□ -1.67
BRCC3-208ENST00000453705 A0A1B0GU33 70 aa4.63□□□□□ -1.67
BRCC3-208ENST00000453705 Q6ZRX8 168 aa4.63□□□□□ -1.67
BRCC3-208ENST00000453705 DNAH17Q9UFH2 4485 aa4.62□□□□□ -1.67
BRCC3-208ENST00000453705 IGLV7-43P04211 117 aa4.62□□□□□ -1.67
BRCC3-208ENST00000453705 NDUFB1O75438 58 aa4.62□□□□□ -1.67
BRCC3-208ENST00000453705 DNAH10Q8IVF4 4471 aa4.62□□□□□ -1.67
BRCC3-208ENST00000453705 STARD9Q9P2P6 4700 aa4.61□□□□□ -1.67
BRCC3-208ENST00000453705 LY6G6CO95867 125 aa4.6□□□□□ -1.67
BRCC3-208ENST00000453705 SPINK7P58062 85 aa4.6□□□□□ -1.67
BRCC3-208ENST00000453705 Q6ZQY7 126 aa4.6□□□□□ -1.67
BRCC3-208ENST00000453705 DNAH2Q9P225 4427 aa4.6□□□□□ -1.67
BRCC3-208ENST00000453705 A0A096LNI7 61 aa4.59□□□□□ -1.67
BRCC3-208ENST00000453705 SPRR1BP22528 89 aa4.59□□□□□ -1.67
BRCC3-208ENST00000453705 Q9BRP9 147 aa4.59□□□□□ -1.67
BRCC3-208ENST00000453705 DNAH8Q96JB1 4490 aa4.58□□□□□ -1.68
BRCC3-208ENST00000453705 A0A087WTM6 91 aa4.58□□□□□ -1.68
BRCC3-208ENST00000453705 ETDCA0A1B0GVM5 59 aa4.58□□□□□ -1.68
BRCC3-208ENST00000453705 SPACA4Q8TDM5 124 aa4.57□□□□□ -1.68
BRCC3-208ENST00000453705 KRTAP13-1Q8IUC0 172 aa4.57□□□□□ -1.68
BRCC3-208ENST00000453705 Q8N9L7 120 aa4.56□□□□□ -1.68
BRCC3-208ENST00000453705 A0A1W2PNN7 141 aa4.56□□□□□ -1.68
BRCC3-208ENST00000453705 C1orf137Q5JT78 98 aa4.54□□□□□ -1.68
BRCC3-208ENST00000453705 PLAC8Q9NZF1 115 aa4.54□□□□□ -1.68
BRCC3-208ENST00000453705 KRTAP15-1Q3LI76 137 aa4.54□□□□□ -1.68
BRCC3-208ENST00000453705 SPRR4Q96PI1 79 aa4.54□□□□□ -1.68
BRCC3-208ENST00000453705 HECTD4Q9Y4D8 3996 aa4.54□□□□□ -1.68
BRCC3-208ENST00000453705 R4GN34 69 aa4.54□□□□□ -1.68
BRCC3-208ENST00000453705 ST20-AS1Q8NBB2 130 aa4.53□□□□□ -1.68
BRCC3-208ENST00000453705 LINC00208Q96KT6 92 aa4.53□□□□□ -1.68
BRCC3-208ENST00000453705 LINC01558Q9Y6Z2 57 aa4.53□□□□□ -1.68
BRCC3-208ENST00000453705 FRAS1Q86XX4 4008 aa4.53□□□□□ -1.68
BRCC3-208ENST00000453705 RPL37AP61513 92 aaKnown RBP4.53□□□□□ -1.68
BRCC3-208ENST00000453705 DMAC1Q96GE9 116 aa4.53□□□□□ -1.68
BRCC3-208ENST00000453705 EPPK1P58107 5090 aaKnown RBP4.52□□□□□ -1.69
BRCC3-208ENST00000453705 KRTAP9-6A0A140TA67 174 aa4.51□□□□□ -1.69
BRCC3-208ENST00000453705 SPINT4Q6UDR6 99 aa4.51□□□□□ -1.69
BRCC3-208ENST00000453705 LYSTQ99698 3801 aa4.5□□□□□ -1.69
BRCC3-208ENST00000453705 Q6ZSA8 131 aa4.48□□□□□ -1.69
BRCC3-208ENST00000453705 KRTAP11-1Q8IUC1 163 aa4.48□□□□□ -1.69
BRCC3-208ENST00000453705 DNAH11Q96DT5 4516 aa4.48□□□□□ -1.69
BRCC3-208ENST00000453705 IGKV2-24A0A0C4DH68 120 aa4.47□□□□□ -1.69
BRCC3-208ENST00000453705 DSCR10P59022 87 aa4.46□□□□□ -1.7
BRCC3-208ENST00000453705 LINC00304Q8N9R0 145 aa4.46□□□□□ -1.7
BRCC3-208ENST00000453705 A0A0G2JQZ4 141 aa4.45□□□□□ -1.7
BRCC3-208ENST00000453705 HYDINQ4G0P3 5121 aa4.45□□□□□ -1.7
BRCC3-208ENST00000453705 DNAH5Q8TE73 4624 aa4.44□□□□□ -1.7
BRCC3-208ENST00000453705 KMT2AQ03164 3969 aa4.43□□□□□ -1.7
BRCC3-208ENST00000453705 PRLHP81277 87 aa4.43□□□□□ -1.7
BRCC3-208ENST00000453705 IGFL1Q6UW32 110 aa4.43□□□□□ -1.7
BRCC3-208ENST00000453705 COA5Q86WW8 74 aa4.43□□□□□ -1.7
BRCC3-208ENST00000453705 HERC2O95714 4834 aa4.43□□□□□ -1.7
BRCC3-208ENST00000453705 RYR1P21817 5038 aa4.42□□□□□ -1.7
BRCC3-208ENST00000453705 PKD1P98161 4303 aa4.42□□□□□ -1.7
BRCC3-208ENST00000453705 FAT2Q9NYQ8 4349 aa4.42□□□□□ -1.7
BRCC3-208ENST00000453705 K7EQZ3 153 aa4.41□□□□□ -1.7
BRCC3-208ENST00000453705 KRTAP10-2P60368 255 aa4.41□□□□□ -1.7
BRCC3-208ENST00000453705 DEFB105AQ8NG35 78 aa4.41□□□□□ -1.7
BRCC3-208ENST00000453705 PSORS1C2Q9UIG4 136 aa4.4□□□□□ -1.7
BRCC3-208ENST00000453705 SRRM2Q9UQ35 2752 aaKnown RBP4.4□□□□□ -1.7
BRCC3-208ENST00000453705 SACSQ9NZJ4 4579 aa4.4□□□□□ -1.71
BRCC3-208ENST00000453705 H0Y9P7 68 aa4.4□□□□□ -1.71
BRCC3-208ENST00000453705 KRTAP29-1A8MX34 341 aaPredicted RBP4.39□□□□□ -1.71
BRCC3-208ENST00000453705 PRO2289Q9P1D8 64 aa4.39□□□□□ -1.71
BRCC3-208ENST00000453705 RYR2Q92736 4967 aa4.38□□□□□ -1.71
BRCC3-208ENST00000453705 LOC100996750A0A140TA64 210 aa4.38□□□□□ -1.71
BRCC3-208ENST00000453705 TPRXLQ17RH7 258 aa4.38□□□□□ -1.71
BRCC3-208ENST00000453705 KRTAP4-6Q9BYQ5 205 aa4.38□□□□□ -1.71
BRCC3-208ENST00000453705 A0A1B0GVY2 172 aa4.37□□□□□ -1.71
BRCC3-208ENST00000453705 PKHD1L1Q86WI1 4243 aa4.37□□□□□ -1.71
BRCC3-208ENST00000453705 LINC00472Q9H8W2 130 aa4.37□□□□□ -1.71
BRCC3-208ENST00000453705 KRTAP10-1P60331 282 aa4.36□□□□□ -1.71
BRCC3-208ENST00000453705 HRES1P13985 223 aa4.36□□□□□ -1.71
BRCC3-208ENST00000453705 UBR4Q5T4S7 5183 aa4.35□□□□□ -1.71
BRCC3-208ENST00000453705 SSBP3-AS1Q7Z2R9 100 aa4.35□□□□□ -1.71
BRCC3-208ENST00000453705 Q96NJ1 140 aa4.35□□□□□ -1.71
BRCC3-208ENST00000453705 UQCR11O14957 56 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms