RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 A0A1B0GV72 72 aa8.21□□□□□ -1.1
SGCE-208ENST00000450385 JMJD7-PLA2G4BH0Y9G9 81 aa8.2□□□□□ -1.1
SGCE-208ENST00000450385 PDE6GP18545 87 aa8.19□□□□□ -1.1
SGCE-208ENST00000450385 IGHV6-1A0A0B4J1U7 121 aa8.18□□□□□ -1.1
SGCE-208ENST00000450385 A0A1B0GVX0 72 aa8.18□□□□□ -1.1
SGCE-208ENST00000450385 ATXN8Q156A1 80 aa8.18□□□□□ -1.1
SGCE-208ENST00000450385 VPS25Q9BRG1 176 aa8.18□□□□□ -1.1
SGCE-208ENST00000450385 DEFB116Q30KQ4 102 aa8.17□□□□□ -1.1
SGCE-208ENST00000450385 Q6ZQT0 140 aa8.16□□□□□ -1.1
SGCE-208ENST00000450385 NOTCH2NLQ7Z3S9 236 aa8.15□□□□□ -1.1
SGCE-208ENST00000450385 RBM12B-AS1Q9P1G2 102 aa8.15□□□□□ -1.1
SGCE-208ENST00000450385 NDUFB1O75438 58 aa8.14□□□□□ -1.11
SGCE-208ENST00000450385 LYRM7Q5U5X0 104 aa8.14□□□□□ -1.11
SGCE-208ENST00000450385 FSIP2Q5CZC0 6907 aa8.14□□□□□ -1.11
SGCE-208ENST00000450385 LOC110117498A0A087WWA1 95 aa8.13□□□□□ -1.11
SGCE-208ENST00000450385 SMIM6P0DI80 62 aa8.12□□□□□ -1.11
SGCE-208ENST00000450385 MPLKIPQ8TAP9 179 aa8.1□□□□□ -1.11
SGCE-208ENST00000450385 FAM236DA0A1B0GTK5 79 aa8.08□□□□□ -1.12
SGCE-208ENST00000450385 FAM236CP0DP71 79 aa8.08□□□□□ -1.12
SGCE-208ENST00000450385 MTURNQ8N3F0 131 aa8.08□□□□□ -1.12
SGCE-208ENST00000450385 Q8N9P0 234 aaPredicted RBP8.07□□□□□ -1.12
SGCE-208ENST00000450385 HRES1P13985 223 aa8.06□□□□□ -1.12
SGCE-208ENST00000450385 A8MWP4 228 aa8.05□□□□□ -1.12
SGCE-208ENST00000450385 TSTD3H0UI37 97 aa8.05□□□□□ -1.12
SGCE-208ENST00000450385 ZCCHC13Q8WW36 166 aaKnown RBP8.05□□□□□ -1.12
SGCE-208ENST00000450385 KRTAP9-8Q9BYQ0 159 aa8.03□□□□□ -1.12
SGCE-208ENST00000450385 NREPQ16612 68 aa8□□□□□ -1.13
SGCE-208ENST00000450385 NAA38Q9BRA0 125 aaKnown RBP8□□□□□ -1.13
SGCE-208ENST00000450385 C8orf17Q9NRJ1 99 aa8□□□□□ -1.13
SGCE-208ENST00000450385 SPINK7P58062 85 aa7.98□□□□□ -1.13
SGCE-208ENST00000450385 C14orf132Q9NPU4 83 aa7.98□□□□□ -1.13
SGCE-208ENST00000450385 IGKV3D-7A0A0C4DH55 119 aa7.97□□□□□ -1.13
SGCE-208ENST00000450385 PRR15Q8IV56 129 aa7.97□□□□□ -1.13
SGCE-208ENST00000450385 H3BT86 120 aa7.96□□□□□ -1.14
SGCE-208ENST00000450385 C9orf118A6NHY6 69 aa7.95□□□□□ -1.14
SGCE-208ENST00000450385 Q6ZVQ6 151 aa7.95□□□□□ -1.14
SGCE-208ENST00000450385 BATFQ16520 125 aa7.91□□□□□ -1.14
SGCE-208ENST00000450385 TMEM254Q8TBM7 123 aa7.91□□□□□ -1.14
SGCE-208ENST00000450385 A0A1W2PPM0 123 aa7.9□□□□□ -1.14
SGCE-208ENST00000450385 MRPL34Q9BQ48 92 aaKnown RBP7.89□□□□□ -1.15
SGCE-208ENST00000450385 TAX1BP3O14907 124 aa7.87□□□□□ -1.15
SGCE-208ENST00000450385 MT2AP02795 61 aa7.87□□□□□ -1.15
SGCE-208ENST00000450385 WFDC13Q8IUB5 93 aa7.87□□□□□ -1.15
SGCE-208ENST00000450385 MMP24-AS1A0A0U1RRL7 71 aa7.86□□□□□ -1.15
SGCE-208ENST00000450385 hDV103S1A0JD37 113 aa7.86□□□□□ -1.15
SGCE-208ENST00000450385 BPY2O14599 106 aa7.83□□□□□ -1.16
SGCE-208ENST00000450385 KRTAP10-10P60014 251 aa7.83□□□□□ -1.16
SGCE-208ENST00000450385 LOC105371267A0A1B0GV96 52 aa7.82□□□□□ -1.16
SGCE-208ENST00000450385 K7EQZ3 153 aa7.8□□□□□ -1.16
SGCE-208ENST00000450385 MT1FP04733 61 aa7.79□□□□□ -1.16
SGCE-208ENST00000450385 KRTAP9-3Q9BYQ3 159 aa7.79□□□□□ -1.16
SGCE-208ENST00000450385 NDUFS5O43920 106 aa7.77□□□□□ -1.17
SGCE-208ENST00000450385 USH2AO75445 5202 aa7.77□□□□□ -1.17
SGCE-208ENST00000450385 SPCS1Q9Y6A9 102 aa7.76□□□□□ -1.17
SGCE-208ENST00000450385 H1FX-AS1Q4G0G2 97 aa7.74□□□□□ -1.17
SGCE-208ENST00000450385 COL5A1-AS1Q5SY13 56 aa7.72□□□□□ -1.17
SGCE-208ENST00000450385 C7orf65Q6ZTY9 151 aa7.72□□□□□ -1.17
SGCE-208ENST00000450385 CASC2Q6XLA1 102 aa7.71□□□□□ -1.18
SGCE-208ENST00000450385 CXCL6P80162 114 aa7.7□□□□□ -1.18
SGCE-208ENST00000450385 UBL5Q9BZL1 73 aa7.7□□□□□ -1.18
SGCE-208ENST00000450385 SSPOA2VEC9 5147 aa7.69□□□□□ -1.18
SGCE-208ENST00000450385 LINC00846Q9NV44 126 aa7.68□□□□□ -1.18
SGCE-208ENST00000450385 Q5W150 140 aa7.66□□□□□ -1.18
SGCE-208ENST00000450385 IGKV2D-30A0A075B6S6 120 aa7.65□□□□□ -1.18
SGCE-208ENST00000450385 HCG22E2RYF7 251 aa7.65□□□□□ -1.18
SGCE-208ENST00000450385 IGKV2-30P06310 120 aa7.65□□□□□ -1.18
SGCE-208ENST00000450385 PRO0461Q9UI25 63 aa7.64□□□□□ -1.19
SGCE-208ENST00000450385 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.63□□□□□ -1.19
SGCE-208ENST00000450385 K7EP34 96 aa7.62□□□□□ -1.19
SGCE-208ENST00000450385 Q8N9L7 120 aa7.62□□□□□ -1.19
SGCE-208ENST00000450385 GTF2H5Q6ZYL4 71 aa7.6□□□□□ -1.19
SGCE-208ENST00000450385 KRTAP19-1Q8IUB9 90 aa7.6□□□□□ -1.19
SGCE-208ENST00000450385 FCGBPQ9Y6R7 5405 aaPredicted RBP7.59□□□□□ -1.19
SGCE-208ENST00000450385 F8W1H4 67 aa7.58□□□□□ -1.2
SGCE-208ENST00000450385 TP53AIP1Q9HCN2 124 aa7.58□□□□□ -1.2
SGCE-208ENST00000450385 KRTAP9-7A8MTY7 169 aa7.56□□□□□ -1.2
SGCE-208ENST00000450385 C4orf26Q17RF5 130 aa7.53□□□□□ -1.2
SGCE-208ENST00000450385 KRTAP19-6Q3LI70 58 aa7.53□□□□□ -1.2
SGCE-208ENST00000450385 ETDBQ3ZM63 59 aa7.45□□□□□ -1.22
SGCE-208ENST00000450385 C1orf64Q8NEQ6 169 aa7.44□□□□□ -1.22
SGCE-208ENST00000450385 ACYP1P07311 99 aa7.43□□□□□ -1.22
SGCE-208ENST00000450385 CSAG1Q6PB30 78 aa7.43□□□□□ -1.22
SGCE-208ENST00000450385 KRTAP3-1Q9BYR8 98 aa7.42□□□□□ -1.22
SGCE-208ENST00000450385 S4R3F8 94 aa7.42□□□□□ -1.22
SGCE-208ENST00000450385 C5orf47Q569G3 176 aa7.39□□□□□ -1.23
SGCE-208ENST00000450385 FAM240AA0A1B0GVK7 77 aa7.36□□□□□ -1.23
SGCE-208ENST00000450385 ATP5EP2Q5VTU8 51 aa7.35□□□□□ -1.23
SGCE-208ENST00000450385 CYP4F30PQ9H0H9 118 aa7.35□□□□□ -1.23
SGCE-208ENST00000450385 FAM236AA0A1B0GUQ0 79 aa7.34□□□□□ -1.23
SGCE-208ENST00000450385 FAM236BA0A1B0GV22 79 aa7.34□□□□□ -1.23
SGCE-208ENST00000450385 LCA10Q71F78 164 aa7.34□□□□□ -1.23
SGCE-208ENST00000450385 MACF1Q9UPN3 7388 aaKnown RBP7.33□□□□□ -1.24
SGCE-208ENST00000450385 TRAV22A0A0B4J277 110 aa7.33□□□□□ -1.24
SGCE-208ENST00000450385 LOC101927531A0A1B0GV80 90 aa7.33□□□□□ -1.24
SGCE-208ENST00000450385 PCP4L1A6NKN8 68 aa7.33□□□□□ -1.24
SGCE-208ENST00000450385 ATOX1O00244 68 aa7.28□□□□□ -1.24
SGCE-208ENST00000450385 SPRR2GQ9BYE4 73 aa7.28□□□□□ -1.24
SGCE-208ENST00000450385 UQCRQO14949 82 aa7.27□□□□□ -1.25
SGCE-208ENST00000450385 KRTAP23-1A1A580 65 aa7.25□□□□□ -1.25
SGCE-208ENST00000450385 KLKP1Q107X0 134 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms