RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 Q75L30 129 aa5.82□□□□□ -1.48
HDAC6-211ENST00000443563 DSCR10P59022 87 aa5.8□□□□□ -1.48
HDAC6-211ENST00000443563 ATP11AUNQ6ZP68 121 aa5.8□□□□□ -1.48
HDAC6-211ENST00000443563 C8orf87E5RJ46 101 aa5.79□□□□□ -1.48
HDAC6-211ENST00000443563 NDUFB1O75438 58 aa5.79□□□□□ -1.48
HDAC6-211ENST00000443563 NREPQ16612 68 aa5.79□□□□□ -1.48
HDAC6-211ENST00000443563 C20orf166-AS1Q96NR2 134 aa5.79□□□□□ -1.48
HDAC6-211ENST00000443563 IGHV6-1A0A0B4J1U7 121 aa5.78□□□□□ -1.48
HDAC6-211ENST00000443563 A0A1B0GVX0 72 aa5.78□□□□□ -1.48
HDAC6-211ENST00000443563 A8MUU9 505 aa5.77□□□□□ -1.49
HDAC6-211ENST00000443563 SMCPP49901 116 aaPredicted RBP5.77□□□□□ -1.49
HDAC6-211ENST00000443563 KRTAP4-1Q9BYQ7 146 aa5.77□□□□□ -1.49
HDAC6-211ENST00000443563 PRO0461Q9UI25 63 aa5.77□□□□□ -1.49
HDAC6-211ENST00000443563 F8W1H4 67 aa5.76□□□□□ -1.49
HDAC6-211ENST00000443563 FAT4Q6V0I7 4981 aa5.76□□□□□ -1.49
HDAC6-211ENST00000443563 A8MWP4 228 aa5.74□□□□□ -1.49
HDAC6-211ENST00000443563 KRTAP16-1A8MUX0 517 aa5.73□□□□□ -1.49
HDAC6-211ENST00000443563 NOTCH2NLQ7Z3S9 236 aa5.72□□□□□ -1.49
HDAC6-211ENST00000443563 IGKV3D-7A0A0C4DH55 119 aa5.7□□□□□ -1.5
HDAC6-211ENST00000443563 BPY2O14599 106 aa5.7□□□□□ -1.5
HDAC6-211ENST00000443563 Q6ZVQ6 151 aa5.69□□□□□ -1.5
HDAC6-211ENST00000443563 PRR15Q8IV56 129 aa5.69□□□□□ -1.5
HDAC6-211ENST00000443563 UBL5Q9BZL1 73 aa5.69□□□□□ -1.5
HDAC6-211ENST00000443563 C8orf17Q9NRJ1 99 aa5.69□□□□□ -1.5
HDAC6-211ENST00000443563 ETDBQ3ZM63 59 aa5.67□□□□□ -1.5
HDAC6-211ENST00000443563 LCE2AQ5TA79 106 aaPredicted RBP5.65□□□□□ -1.5
HDAC6-211ENST00000443563 Q8N9P0 234 aaPredicted RBP5.65□□□□□ -1.5
HDAC6-211ENST00000443563 K7EQZ3 153 aa5.64□□□□□ -1.51
HDAC6-211ENST00000443563 LINC00846Q9NV44 126 aa5.64□□□□□ -1.51
HDAC6-211ENST00000443563 MMP24-AS1A0A0U1RRL7 71 aa5.63□□□□□ -1.51
HDAC6-211ENST00000443563 COX6B2Q6YFQ2 88 aa5.63□□□□□ -1.51
HDAC6-211ENST00000443563 TMEM254Q8TBM7 123 aa5.63□□□□□ -1.51
HDAC6-211ENST00000443563 hDV103S1A0JD37 113 aa5.62□□□□□ -1.51
HDAC6-211ENST00000443563 ZCCHC13Q8WW36 166 aaKnown RBP5.62□□□□□ -1.51
HDAC6-211ENST00000443563 MRPL34Q9BQ48 92 aaKnown RBP5.62□□□□□ -1.51
HDAC6-211ENST00000443563 KRTAP19-2Q3LHN2 52 aa5.61□□□□□ -1.51
HDAC6-211ENST00000443563 LCE2CQ5TA81 110 aa5.6□□□□□ -1.51
HDAC6-211ENST00000443563 ACYP1P07311 99 aa5.59□□□□□ -1.51
HDAC6-211ENST00000443563 NDUFS5O43920 106 aa5.58□□□□□ -1.52
HDAC6-211ENST00000443563 CXCL6P80162 114 aa5.57□□□□□ -1.52
HDAC6-211ENST00000443563 CASC2Q6XLA1 102 aa5.57□□□□□ -1.52
HDAC6-211ENST00000443563 Q8N9L7 120 aa5.57□□□□□ -1.52
HDAC6-211ENST00000443563 A0A1B0GV90 55 aa5.56□□□□□ -1.52
HDAC6-211ENST00000443563 FLGP20930 4061 aaPredicted RBP5.56□□□□□ -1.52
HDAC6-211ENST00000443563 FAM240AA0A1B0GVK7 77 aa5.55□□□□□ -1.52
HDAC6-211ENST00000443563 WFDC13Q8IUB5 93 aa5.55□□□□□ -1.52
HDAC6-211ENST00000443563 RBM12B-AS1Q9P1G2 102 aa5.55□□□□□ -1.52
HDAC6-211ENST00000443563 MT1HP80294 61 aa5.54□□□□□ -1.52
HDAC6-211ENST00000443563 HCG22E2RYF7 251 aa5.53□□□□□ -1.52
HDAC6-211ENST00000443563 SPINK7P58062 85 aa5.53□□□□□ -1.52
HDAC6-211ENST00000443563 FAM236DA0A1B0GTK5 79 aa5.52□□□□□ -1.53
HDAC6-211ENST00000443563 FAM236CP0DP71 79 aa5.52□□□□□ -1.53
HDAC6-211ENST00000443563 M0R2T5 61 aa5.51□□□□□ -1.53
HDAC6-211ENST00000443563 HRES1P13985 223 aa5.51□□□□□ -1.53
HDAC6-211ENST00000443563 ATP5EP2Q5VTU8 51 aa5.5□□□□□ -1.53
HDAC6-211ENST00000443563 MPLKIPQ8TAP9 179 aa5.5□□□□□ -1.53
HDAC6-211ENST00000443563 J3QR89 54 aa5.46□□□□□ -1.54
HDAC6-211ENST00000443563 TP53AIP1Q9HCN2 124 aa5.46□□□□□ -1.54
HDAC6-211ENST00000443563 C7orf65Q6ZTY9 151 aa5.45□□□□□ -1.54
HDAC6-211ENST00000443563 Q5W150 140 aa5.44□□□□□ -1.54
HDAC6-211ENST00000443563 LINC00643Q86TS7 51 aa5.44□□□□□ -1.54
HDAC6-211ENST00000443563 IGKV2D-30A0A075B6S6 120 aa5.43□□□□□ -1.54
HDAC6-211ENST00000443563 IGKV2-30P06310 120 aa5.43□□□□□ -1.54
HDAC6-211ENST00000443563 KRTAP10-6P60371 365 aaPredicted RBP5.42□□□□□ -1.54
HDAC6-211ENST00000443563 HIST1H4AP62805 103 aaKnown RBP5.42□□□□□ -1.54
HDAC6-211ENST00000443563 LORP23490 312 aaPredicted RBP5.4□□□□□ -1.54
HDAC6-211ENST00000443563 PCP4P48539 62 aa5.37□□□□□ -1.55
HDAC6-211ENST00000443563 KRTAP9-2Q9BYQ4 174 aa5.36□□□□□ -1.55
HDAC6-211ENST00000443563 TRAV22A0A0B4J277 110 aa5.34□□□□□ -1.55
HDAC6-211ENST00000443563 UQCRQO14949 82 aa5.33□□□□□ -1.56
HDAC6-211ENST00000443563 H1FX-AS1Q4G0G2 97 aa5.33□□□□□ -1.56
HDAC6-211ENST00000443563 A0A087WVE0 104 aa5.32□□□□□ -1.56
HDAC6-211ENST00000443563 K7ERU9 68 aa5.32□□□□□ -1.56
HDAC6-211ENST00000443563 SVIPQ8NHG7 77 aa5.32□□□□□ -1.56
HDAC6-211ENST00000443563 LOC101927531A0A1B0GV80 90 aa5.3□□□□□ -1.56
HDAC6-211ENST00000443563 ATOX1O00244 68 aa5.3□□□□□ -1.56
HDAC6-211ENST00000443563 C4orf26Q17RF5 130 aa5.3□□□□□ -1.56
HDAC6-211ENST00000443563 H0Y9P7 68 aa5.27□□□□□ -1.57
HDAC6-211ENST00000443563 CYP4F30PQ9H0H9 118 aa5.27□□□□□ -1.57
HDAC6-211ENST00000443563 KRTAP9-8Q9BYQ0 159 aa5.26□□□□□ -1.57
HDAC6-211ENST00000443563 C1orf64Q8NEQ6 169 aa5.25□□□□□ -1.57
HDAC6-211ENST00000443563 IMUPQ9GZP8 106 aa5.25□□□□□ -1.57
HDAC6-211ENST00000443563 SCGB1A1P11684 91 aa5.23□□□□□ -1.57
HDAC6-211ENST00000443563 MP68P56378 58 aa5.23□□□□□ -1.57
HDAC6-211ENST00000443563 OCR1Q9BZK8 76 aa5.23□□□□□ -1.57
HDAC6-211ENST00000443563 MT2AP02795 61 aa5.21□□□□□ -1.58
HDAC6-211ENST00000443563 C5orf47Q569G3 176 aa5.21□□□□□ -1.58
HDAC6-211ENST00000443563 LINC00208Q96KT6 92 aa5.2□□□□□ -1.58
HDAC6-211ENST00000443563 KRTAP10-10P60014 251 aa5.19□□□□□ -1.58
HDAC6-211ENST00000443563 KRTAP3-1Q9BYR8 98 aa5.19□□□□□ -1.58
HDAC6-211ENST00000443563 S4R3F8 94 aa5.19□□□□□ -1.58
HDAC6-211ENST00000443563 H3BPC8 53 aa5.18□□□□□ -1.58
HDAC6-211ENST00000443563 MT-ATP8P03928 68 aa5.18□□□□□ -1.58
HDAC6-211ENST00000443563 MT1FP04733 61 aa5.16□□□□□ -1.58
HDAC6-211ENST00000443563 SMIM20Q8N5G0 67 aa5.16□□□□□ -1.58
HDAC6-211ENST00000443563 CSAG1Q6PB30 78 aa5.14□□□□□ -1.59
HDAC6-211ENST00000443563 KRTAP9-6A0A140TA67 174 aa5.13□□□□□ -1.59
HDAC6-211ENST00000443563 A8MUN3 132 aa5.13□□□□□ -1.59
HDAC6-211ENST00000443563 LCA10Q71F78 164 aa5.13□□□□□ -1.59
HDAC6-211ENST00000443563 FAM236AA0A1B0GUQ0 79 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms