RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 FAM236CP0DP71 79 aa8.16□□□□□ -1.1
SNRPD3-204ENST00000439775 RBM12B-AS1Q9P1G2 102 aa8.16□□□□□ -1.1
SNRPD3-204ENST00000439775 J3KT08 172 aa8.14□□□□□ -1.11
SNRPD3-204ENST00000439775 BAALC-AS2P0C853 105 aa8.14□□□□□ -1.11
SNRPD3-204ENST00000439775 C9JAW5 83 aa8.13□□□□□ -1.11
SNRPD3-204ENST00000439775 Q6ZQT0 140 aa8.11□□□□□ -1.11
SNRPD3-204ENST00000439775 ZCCHC13Q8WW36 166 aaKnown RBP8.09□□□□□ -1.11
SNRPD3-204ENST00000439775 MT2AP02795 61 aa8.08□□□□□ -1.12
SNRPD3-204ENST00000439775 A0A1B0GW54 56 aa8.07□□□□□ -1.12
SNRPD3-204ENST00000439775 JMJD7-PLA2G4BH0Y9G9 81 aa8.07□□□□□ -1.12
SNRPD3-204ENST00000439775 M0R143 59 aa8.07□□□□□ -1.12
SNRPD3-204ENST00000439775 ATXN8Q156A1 80 aa8.07□□□□□ -1.12
SNRPD3-204ENST00000439775 LOC110117498A0A087WWA1 95 aa8.06□□□□□ -1.12
SNRPD3-204ENST00000439775 NDUFB1O75438 58 aa8.06□□□□□ -1.12
SNRPD3-204ENST00000439775 Q8N9P0 234 aaPredicted RBP8.06□□□□□ -1.12
SNRPD3-204ENST00000439775 MTURNQ8N3F0 131 aa8.04□□□□□ -1.12
SNRPD3-204ENST00000439775 A8MWP4 228 aa8.03□□□□□ -1.12
SNRPD3-204ENST00000439775 PDE6GP18545 87 aa8.03□□□□□ -1.12
SNRPD3-204ENST00000439775 MT1FP04733 61 aa8.02□□□□□ -1.13
SNRPD3-204ENST00000439775 SPINK7P58062 85 aa8.02□□□□□ -1.13
SNRPD3-204ENST00000439775 NAA38Q9BRA0 125 aaKnown RBP8.02□□□□□ -1.13
SNRPD3-204ENST00000439775 C8orf17Q9NRJ1 99 aa8.01□□□□□ -1.13
SNRPD3-204ENST00000439775 USH2AO75445 5202 aa8.01□□□□□ -1.13
SNRPD3-204ENST00000439775 IGKV3D-7A0A0C4DH55 119 aa7.98□□□□□ -1.13
SNRPD3-204ENST00000439775 LYRM7Q5U5X0 104 aa7.97□□□□□ -1.13
SNRPD3-204ENST00000439775 C14orf132Q9NPU4 83 aa7.97□□□□□ -1.13
SNRPD3-204ENST00000439775 KRTAP10-10P60014 251 aa7.96□□□□□ -1.14
SNRPD3-204ENST00000439775 KRTAP9-3Q9BYQ3 159 aa7.96□□□□□ -1.14
SNRPD3-204ENST00000439775 SSPOA2VEC9 5147 aa7.95□□□□□ -1.14
SNRPD3-204ENST00000439775 SMIM6P0DI80 62 aa7.95□□□□□ -1.14
SNRPD3-204ENST00000439775 Q6ZVQ6 151 aa7.94□□□□□ -1.14
SNRPD3-204ENST00000439775 PRR15Q8IV56 129 aa7.94□□□□□ -1.14
SNRPD3-204ENST00000439775 LCE2BO14633 110 aa7.93□□□□□ -1.14
SNRPD3-204ENST00000439775 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.92□□□□□ -1.14
SNRPD3-204ENST00000439775 WFDC13Q8IUB5 93 aa7.92□□□□□ -1.14
SNRPD3-204ENST00000439775 NREPQ16612 68 aa7.91□□□□□ -1.14
SNRPD3-204ENST00000439775 MMP24-AS1A0A0U1RRL7 71 aa7.88□□□□□ -1.15
SNRPD3-204ENST00000439775 TMEM254Q8TBM7 123 aa7.88□□□□□ -1.15
SNRPD3-204ENST00000439775 MRPL34Q9BQ48 92 aaKnown RBP7.87□□□□□ -1.15
SNRPD3-204ENST00000439775 TSTD3H0UI37 97 aa7.86□□□□□ -1.15
SNRPD3-204ENST00000439775 KRTAP9-7A8MTY7 169 aa7.85□□□□□ -1.15
SNRPD3-204ENST00000439775 H3BT86 120 aa7.85□□□□□ -1.15
SNRPD3-204ENST00000439775 BATFQ16520 125 aa7.84□□□□□ -1.15
SNRPD3-204ENST00000439775 KRTAP19-1Q8IUB9 90 aa7.84□□□□□ -1.15
SNRPD3-204ENST00000439775 hDV103S1A0JD37 113 aa7.83□□□□□ -1.16
SNRPD3-204ENST00000439775 K7EQZ3 153 aa7.83□□□□□ -1.16
SNRPD3-204ENST00000439775 C9orf118A6NHY6 69 aa7.81□□□□□ -1.16
SNRPD3-204ENST00000439775 FCGBPQ9Y6R7 5405 aaPredicted RBP7.81□□□□□ -1.16
SNRPD3-204ENST00000439775 A0A1W2PPM0 123 aa7.78□□□□□ -1.16
SNRPD3-204ENST00000439775 NDUFS5O43920 106 aa7.78□□□□□ -1.16
SNRPD3-204ENST00000439775 BPY2O14599 106 aa7.77□□□□□ -1.17
SNRPD3-204ENST00000439775 TAX1BP3O14907 124 aa7.77□□□□□ -1.17
SNRPD3-204ENST00000439775 H1FX-AS1Q4G0G2 97 aa7.76□□□□□ -1.17
SNRPD3-204ENST00000439775 C7orf65Q6ZTY9 151 aa7.72□□□□□ -1.17
SNRPD3-204ENST00000439775 IGKV2D-30A0A075B6S6 120 aa7.7□□□□□ -1.18
SNRPD3-204ENST00000439775 IGKV2-30P06310 120 aa7.7□□□□□ -1.18
SNRPD3-204ENST00000439775 KRTAP19-6Q3LI70 58 aa7.7□□□□□ -1.18
SNRPD3-204ENST00000439775 Q5W150 140 aa7.7□□□□□ -1.18
SNRPD3-204ENST00000439775 LINC00846Q9NV44 126 aa7.7□□□□□ -1.18
SNRPD3-204ENST00000439775 CASC2Q6XLA1 102 aa7.68□□□□□ -1.18
SNRPD3-204ENST00000439775 Q8N9L7 120 aa7.67□□□□□ -1.18
SNRPD3-204ENST00000439775 LOC105371267A0A1B0GV96 52 aa7.66□□□□□ -1.18
SNRPD3-204ENST00000439775 SPCS1Q9Y6A9 102 aa7.66□□□□□ -1.18
SNRPD3-204ENST00000439775 HCG22E2RYF7 251 aa7.65□□□□□ -1.18
SNRPD3-204ENST00000439775 SMCPP49901 116 aaPredicted RBP7.63□□□□□ -1.19
SNRPD3-204ENST00000439775 CXCL6P80162 114 aa7.63□□□□□ -1.19
SNRPD3-204ENST00000439775 UBL5Q9BZL1 73 aa7.59□□□□□ -1.19
SNRPD3-204ENST00000439775 C4orf26Q17RF5 130 aa7.58□□□□□ -1.2
SNRPD3-204ENST00000439775 MACF1Q9UPN3 7388 aaKnown RBP7.58□□□□□ -1.2
SNRPD3-204ENST00000439775 PRO0461Q9UI25 63 aa7.56□□□□□ -1.2
SNRPD3-204ENST00000439775 COL5A1-AS1Q5SY13 56 aa7.54□□□□□ -1.2
SNRPD3-204ENST00000439775 K7EP34 96 aa7.51□□□□□ -1.21
SNRPD3-204ENST00000439775 KRTAP3-1Q9BYR8 98 aa7.48□□□□□ -1.21
SNRPD3-204ENST00000439775 C5orf47Q569G3 176 aa7.47□□□□□ -1.21
SNRPD3-204ENST00000439775 TP53AIP1Q9HCN2 124 aa7.46□□□□□ -1.22
SNRPD3-204ENST00000439775 S4R3F8 94 aa7.46□□□□□ -1.22
SNRPD3-204ENST00000439775 SYNE2Q8WXH0 6885 aaKnown RBP7.44□□□□□ -1.22
SNRPD3-204ENST00000439775 C1orf64Q8NEQ6 169 aa7.43□□□□□ -1.22
SNRPD3-204ENST00000439775 FAM236AA0A1B0GUQ0 79 aa7.42□□□□□ -1.22
SNRPD3-204ENST00000439775 FAM236BA0A1B0GV22 79 aa7.42□□□□□ -1.22
SNRPD3-204ENST00000439775 CSAG1Q6PB30 78 aa7.41□□□□□ -1.22
SNRPD3-204ENST00000439775 GTF2H5Q6ZYL4 71 aa7.4□□□□□ -1.22
SNRPD3-204ENST00000439775 LCA10Q71F78 164 aa7.4□□□□□ -1.22
SNRPD3-204ENST00000439775 F8W1H4 67 aa7.38□□□□□ -1.23
SNRPD3-204ENST00000439775 KRTAP6-3Q3LI67 103 aa7.38□□□□□ -1.23
SNRPD3-204ENST00000439775 SPRR2GQ9BYE4 73 aa7.36□□□□□ -1.23
SNRPD3-204ENST00000439775 ETDBQ3ZM63 59 aa7.34□□□□□ -1.23
SNRPD3-204ENST00000439775 MT1BP07438 61 aa7.33□□□□□ -1.24
SNRPD3-204ENST00000439775 KRTAP19-8Q3LI54 63 aa7.32□□□□□ -1.24
SNRPD3-204ENST00000439775 Q5VV11 94 aa7.32□□□□□ -1.24
SNRPD3-204ENST00000439775 CYP4F30PQ9H0H9 118 aa7.31□□□□□ -1.24
SNRPD3-204ENST00000439775 A6NN06 94 aa7.29□□□□□ -1.24
SNRPD3-204ENST00000439775 KRTAP3-3Q9BYR6 98 aa7.29□□□□□ -1.24
SNRPD3-204ENST00000439775 TRAV22A0A0B4J277 110 aa7.28□□□□□ -1.24
SNRPD3-204ENST00000439775 KLKP1Q107X0 134 aa7.28□□□□□ -1.24
SNRPD3-204ENST00000439775 LOC101927531A0A1B0GV80 90 aa7.25□□□□□ -1.25
SNRPD3-204ENST00000439775 ACYP1P07311 99 aa7.23□□□□□ -1.25
SNRPD3-204ENST00000439775 ATP5EP2Q5VTU8 51 aa7.21□□□□□ -1.26
SNRPD3-204ENST00000439775 FAM240AA0A1B0GVK7 77 aa7.2□□□□□ -1.26
SNRPD3-204ENST00000439775 KRTAP10-5P60370 271 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms