RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 Q6ZVQ6 151 aa9.81□□□□□ -0.84
CDC42EP1-203ENST00000430687 UBL5Q9BZL1 73 aa9.81□□□□□ -0.84
CDC42EP1-203ENST00000430687 LINC00846Q9NV44 126 aa9.81□□□□□ -0.84
CDC42EP1-203ENST00000430687 IGHV6-1A0A0B4J1U7 121 aa9.8□□□□□ -0.84
CDC42EP1-203ENST00000430687 C8orf87E5RJ46 101 aa9.8□□□□□ -0.84
CDC42EP1-203ENST00000430687 DSCR10P59022 87 aa9.79□□□□□ -0.84
CDC42EP1-203ENST00000430687 RPL37P61927 97 aaKnown RBP9.78□□□□□ -0.84
CDC42EP1-203ENST00000430687 BPY2O14599 106 aa9.77□□□□□ -0.85
CDC42EP1-203ENST00000430687 ACYP1P07311 99 aa9.76□□□□□ -0.85
CDC42EP1-203ENST00000430687 Q75L30 129 aa9.76□□□□□ -0.85
CDC42EP1-203ENST00000430687 IGKV3D-7A0A0C4DH55 119 aa9.75□□□□□ -0.85
CDC42EP1-203ENST00000430687 PRR15Q8IV56 129 aa9.74□□□□□ -0.85
CDC42EP1-203ENST00000430687 C20orf166-AS1Q96NR2 134 aa9.74□□□□□ -0.85
CDC42EP1-203ENST00000430687 FAM240AA0A1B0GVK7 77 aa9.73□□□□□ -0.85
CDC42EP1-203ENST00000430687 NOTCH2NLQ7Z3S9 236 aa9.73□□□□□ -0.85
CDC42EP1-203ENST00000430687 A8MUU9 505 aa9.72□□□□□ -0.85
CDC42EP1-203ENST00000430687 KRTAP16-1A8MUX0 517 aa9.72□□□□□ -0.85
CDC42EP1-203ENST00000430687 MUC17Q685J3 4493 aa9.7□□□□□ -0.86
CDC42EP1-203ENST00000430687 C8orf17Q9NRJ1 99 aa9.7□□□□□ -0.86
CDC42EP1-203ENST00000430687 PCOTHQ58A44 107 aa9.69□□□□□ -0.86
CDC42EP1-203ENST00000430687 RNF213Q63HN8 5207 aa9.68□□□□□ -0.86
CDC42EP1-203ENST00000430687 K7EQZ3 153 aa9.68□□□□□ -0.86
CDC42EP1-203ENST00000430687 ATP11AUNQ6ZP68 121 aa9.67□□□□□ -0.86
CDC42EP1-203ENST00000430687 CXCL6P80162 114 aa9.64□□□□□ -0.87
CDC42EP1-203ENST00000430687 MMP24-AS1A0A0U1RRL7 71 aa9.62□□□□□ -0.87
CDC42EP1-203ENST00000430687 J3QR89 54 aa9.62□□□□□ -0.87
CDC42EP1-203ENST00000430687 Q8N9P0 234 aaPredicted RBP9.61□□□□□ -0.87
CDC42EP1-203ENST00000430687 TMEM254Q8TBM7 123 aa9.6□□□□□ -0.87
CDC42EP1-203ENST00000430687 Q8N9L7 120 aa9.59□□□□□ -0.87
CDC42EP1-203ENST00000430687 hDV103S1A0JD37 113 aa9.58□□□□□ -0.88
CDC42EP1-203ENST00000430687 KRTAP4-1Q9BYQ7 146 aa9.58□□□□□ -0.88
CDC42EP1-203ENST00000430687 MRPL34Q9BQ48 92 aaKnown RBP9.57□□□□□ -0.88
CDC42EP1-203ENST00000430687 ATP5EP2Q5VTU8 51 aa9.56□□□□□ -0.88
CDC42EP1-203ENST00000430687 MUC2Q02817 5179 aa9.53□□□□□ -0.88
CDC42EP1-203ENST00000430687 CASC2Q6XLA1 102 aa9.53□□□□□ -0.88
CDC42EP1-203ENST00000430687 LINC00643Q86TS7 51 aa9.53□□□□□ -0.88
CDC42EP1-203ENST00000430687 A0A0U1RQV1 116 aa9.51□□□□□ -0.89
CDC42EP1-203ENST00000430687 HCG22E2RYF7 251 aa9.5□□□□□ -0.89
CDC42EP1-203ENST00000430687 WFDC13Q8IUB5 93 aa9.5□□□□□ -0.89
CDC42EP1-203ENST00000430687 ZCCHC13Q8WW36 166 aaKnown RBP9.49□□□□□ -0.89
CDC42EP1-203ENST00000430687 K7ERU9 68 aa9.45□□□□□ -0.9
CDC42EP1-203ENST00000430687 NDUFS5O43920 106 aa9.44□□□□□ -0.9
CDC42EP1-203ENST00000430687 HIST1H4AP62805 103 aaKnown RBP9.4□□□□□ -0.9
CDC42EP1-203ENST00000430687 TP53AIP1Q9HCN2 124 aa9.35□□□□□ -0.91
CDC42EP1-203ENST00000430687 SPINK7P58062 85 aa9.32□□□□□ -0.92
CDC42EP1-203ENST00000430687 KRTAP19-2Q3LHN2 52 aa9.31□□□□□ -0.92
CDC42EP1-203ENST00000430687 Q5W150 140 aa9.31□□□□□ -0.92
CDC42EP1-203ENST00000430687 A0A087WVE0 104 aa9.29□□□□□ -0.92
CDC42EP1-203ENST00000430687 FAT4Q6V0I7 4981 aa9.26□□□□□ -0.93
CDC42EP1-203ENST00000430687 HRES1P13985 223 aa9.26□□□□□ -0.93
CDC42EP1-203ENST00000430687 LCE2CQ5TA81 110 aa9.26□□□□□ -0.93
CDC42EP1-203ENST00000430687 IMUPQ9GZP8 106 aa9.25□□□□□ -0.93
CDC42EP1-203ENST00000430687 COX6B2Q6YFQ2 88 aa9.24□□□□□ -0.93
CDC42EP1-203ENST00000430687 MPLKIPQ8TAP9 179 aa9.24□□□□□ -0.93
CDC42EP1-203ENST00000430687 RBM12B-AS1Q9P1G2 102 aa9.22□□□□□ -0.93
CDC42EP1-203ENST00000430687 C7orf65Q6ZTY9 151 aa9.21□□□□□ -0.94
CDC42EP1-203ENST00000430687 LCE2AQ5TA79 106 aaPredicted RBP9.2□□□□□ -0.94
CDC42EP1-203ENST00000430687 UQCRQO14949 82 aa9.19□□□□□ -0.94
CDC42EP1-203ENST00000430687 KRTAP9-2Q9BYQ4 174 aa9.19□□□□□ -0.94
CDC42EP1-203ENST00000430687 IGKV2D-30A0A075B6S6 120 aa9.18□□□□□ -0.94
CDC42EP1-203ENST00000430687 MT-ATP8P03928 68 aa9.18□□□□□ -0.94
CDC42EP1-203ENST00000430687 IGKV2-30P06310 120 aa9.18□□□□□ -0.94
CDC42EP1-203ENST00000430687 TRAV22A0A0B4J277 110 aa9.15□□□□□ -0.94
CDC42EP1-203ENST00000430687 FAM236DA0A1B0GTK5 79 aa9.13□□□□□ -0.95
CDC42EP1-203ENST00000430687 FAM236CP0DP71 79 aa9.13□□□□□ -0.95
CDC42EP1-203ENST00000430687 MT1HP80294 61 aa9.12□□□□□ -0.95
CDC42EP1-203ENST00000430687 OCR1Q9BZK8 76 aa9.11□□□□□ -0.95
CDC42EP1-203ENST00000430687 ATOX1O00244 68 aa9.1□□□□□ -0.95
CDC42EP1-203ENST00000430687 SCGB1A1P11684 91 aa9.1□□□□□ -0.95
CDC42EP1-203ENST00000430687 LOC101927531A0A1B0GV80 90 aa9.08□□□□□ -0.96
CDC42EP1-203ENST00000430687 H0Y9P7 68 aa9.07□□□□□ -0.96
CDC42EP1-203ENST00000430687 CYP4F30PQ9H0H9 118 aa9.04□□□□□ -0.96
CDC42EP1-203ENST00000430687 KRTAP9-6A0A140TA67 174 aa9.03□□□□□ -0.96
CDC42EP1-203ENST00000430687 C5orf47Q569G3 176 aa9.03□□□□□ -0.96
CDC42EP1-203ENST00000430687 FAM236AA0A1B0GUQ0 79 aa9.01□□□□□ -0.97
CDC42EP1-203ENST00000430687 FAM236BA0A1B0GV22 79 aa9.01□□□□□ -0.97
CDC42EP1-203ENST00000430687 MP68P56378 58 aa9.01□□□□□ -0.97
CDC42EP1-203ENST00000430687 M0R2T5 61 aa9□□□□□ -0.97
CDC42EP1-203ENST00000430687 SMIM20Q8N5G0 67 aa9□□□□□ -0.97
CDC42EP1-203ENST00000430687 C4orf26Q17RF5 130 aa8.99□□□□□ -0.97
CDC42EP1-203ENST00000430687 C1orf64Q8NEQ6 169 aa8.98□□□□□ -0.97
CDC42EP1-203ENST00000430687 H3BPC8 53 aa8.97□□□□□ -0.97
CDC42EP1-203ENST00000430687 LINC00208Q96KT6 92 aa8.96□□□□□ -0.98
CDC42EP1-203ENST00000430687 FLGP20930 4061 aaPredicted RBP8.96□□□□□ -0.98
CDC42EP1-203ENST00000430687 H1FX-AS1Q4G0G2 97 aa8.95□□□□□ -0.98
CDC42EP1-203ENST00000430687 TRAV7A0A075B6U4 112 aa8.93□□□□□ -0.98
CDC42EP1-203ENST00000430687 KRTAP10-6P60371 365 aaPredicted RBP8.88□□□□□ -0.99
CDC42EP1-203ENST00000430687 LORP23490 312 aaPredicted RBP8.86□□□□□ -0.99
CDC42EP1-203ENST00000430687 KRTAP3-1Q9BYR8 98 aa8.86□□□□□ -0.99
CDC42EP1-203ENST00000430687 KLKP1Q107X0 134 aa8.83□□□□□ -1
CDC42EP1-203ENST00000430687 SERP2Q8N6R1 65 aa8.79□□□□□ -1
CDC42EP1-203ENST00000430687 A8MUN3 132 aa8.76□□□□□ -1.01
CDC42EP1-203ENST00000430687 S4R3F8 94 aa8.73□□□□□ -1.01
CDC42EP1-203ENST00000430687 KRTAP9-8Q9BYQ0 159 aa8.71□□□□□ -1.02
CDC42EP1-203ENST00000430687 LCE2DQ5TA82 110 aaPredicted RBP8.69□□□□□ -1.02
CDC42EP1-203ENST00000430687 LCA10Q71F78 164 aa8.67□□□□□ -1.02
CDC42EP1-203ENST00000430687 C20orf197Q8N268 126 aa8.66□□□□□ -1.02
CDC42EP1-203ENST00000430687 SNURFQ9Y675 71 aa8.65□□□□□ -1.02
CDC42EP1-203ENST00000430687 COX7CP15954 63 aa8.64□□□□□ -1.03
CDC42EP1-203ENST00000430687 CSAG1Q6PB30 78 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms