RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 IGLV5-48A0A075B6I7 105 aa4.45□□□□□ -1.7
CNOT4-206ENST00000428680 FP248Q71RG6 208 aaPredicted RBP4.45□□□□□ -1.7
CNOT4-206ENST00000428680 HECTD4Q9Y4D8 3996 aa4.44□□□□□ -1.7
CNOT4-206ENST00000428680 BIRC6Q9NR09 4857 aa4.44□□□□□ -1.7
CNOT4-206ENST00000428680 VPS13DQ5THJ4 4388 aa4.43□□□□□ -1.7
CNOT4-206ENST00000428680 LINC01600Q96MT4 127 aa4.42□□□□□ -1.7
CNOT4-206ENST00000428680 Q6ZRN7 208 aaPredicted RBP4.42□□□□□ -1.7
CNOT4-206ENST00000428680 SPINT4Q6UDR6 99 aa4.42□□□□□ -1.7
CNOT4-206ENST00000428680 VWFP04275 2813 aa4.41□□□□□ -1.7
CNOT4-206ENST00000428680 LITAFQ99732 161 aa4.39□□□□□ -1.71
CNOT4-206ENST00000428680 SMIM26A0A096LP01 95 aa4.39□□□□□ -1.71
CNOT4-206ENST00000428680 PSPHP1O15172 72 aa4.39□□□□□ -1.71
CNOT4-206ENST00000428680 HRES1P13985 223 aa4.39□□□□□ -1.71
CNOT4-206ENST00000428680 DNAH10Q8IVF4 4471 aa4.38□□□□□ -1.71
CNOT4-206ENST00000428680 C4orf26Q17RF5 130 aa4.37□□□□□ -1.71
CNOT4-206ENST00000428680 A0A0D9SG42 100 aa4.37□□□□□ -1.71
CNOT4-206ENST00000428680 SRRM2Q9UQ35 2752 aaKnown RBP4.36□□□□□ -1.71
CNOT4-206ENST00000428680 A0A1W2PNM2 257 aa4.36□□□□□ -1.71
CNOT4-206ENST00000428680 EIF4EBP3O60516 100 aaPredicted RBP4.36□□□□□ -1.71
CNOT4-206ENST00000428680 ZCCHC13Q8WW36 166 aaKnown RBP4.36□□□□□ -1.71
CNOT4-206ENST00000428680 FAT2Q9NYQ8 4349 aa4.36□□□□□ -1.71
CNOT4-206ENST00000428680 PLAC4Q8WY50 150 aa4.35□□□□□ -1.71
CNOT4-206ENST00000428680 SPINK7P58062 85 aa4.35□□□□□ -1.71
CNOT4-206ENST00000428680 R4GN34 69 aa4.34□□□□□ -1.71
CNOT4-206ENST00000428680 CRIPTQ9P021 101 aa4.33□□□□□ -1.72
CNOT4-206ENST00000428680 HUWE1Q7Z6Z7 4374 aaKnown RBP4.33□□□□□ -1.72
CNOT4-206ENST00000428680 FAM104AQ969W3 186 aa4.33□□□□□ -1.72
CNOT4-206ENST00000428680 S4R3F8 94 aa4.32□□□□□ -1.72
CNOT4-206ENST00000428680 UQCR11O14957 56 aa4.31□□□□□ -1.72
CNOT4-206ENST00000428680 PMAIP1Q13794 54 aa4.31□□□□□ -1.72
CNOT4-206ENST00000428680 RYR2Q92736 4967 aa4.3□□□□□ -1.72
CNOT4-206ENST00000428680 PANO1I0J062 215 aa4.3□□□□□ -1.72
CNOT4-206ENST00000428680 CCDC179H3BU77 68 aa4.29□□□□□ -1.72
CNOT4-206ENST00000428680 C1orf195Q5TG92 126 aa4.29□□□□□ -1.72
CNOT4-206ENST00000428680 A8MUN3 132 aa4.28□□□□□ -1.72
CNOT4-206ENST00000428680 VPS13BQ7Z7G8 4022 aa4.28□□□□□ -1.72
CNOT4-206ENST00000428680 SPRR1AP35321 89 aa4.28□□□□□ -1.72
CNOT4-206ENST00000428680 COA5Q86WW8 74 aa4.28□□□□□ -1.72
CNOT4-206ENST00000428680 PKHD1P08F94 4074 aa4.26□□□□□ -1.73
CNOT4-206ENST00000428680 A0A087X002 238 aa4.26□□□□□ -1.73
CNOT4-206ENST00000428680 SPRR1BP22528 89 aa4.26□□□□□ -1.73
CNOT4-206ENST00000428680 LCA10Q71F78 164 aa4.26□□□□□ -1.73
CNOT4-206ENST00000428680 KRTAP26-1Q6PEX3 210 aa4.25□□□□□ -1.73
CNOT4-206ENST00000428680 DNAH17Q9UFH2 4485 aa4.24□□□□□ -1.73
CNOT4-206ENST00000428680 DNAH8Q96JB1 4490 aa4.24□□□□□ -1.73
CNOT4-206ENST00000428680 DNAH11Q96DT5 4516 aa4.23□□□□□ -1.73
CNOT4-206ENST00000428680 SMCPP49901 116 aaPredicted RBP4.23□□□□□ -1.73
CNOT4-206ENST00000428680 PLECQ15149 4684 aaKnown RBP4.23□□□□□ -1.73
CNOT4-206ENST00000428680 C20orf166-AS1Q96NR2 134 aa4.23□□□□□ -1.73
CNOT4-206ENST00000428680 TGP01266 2768 aa4.22□□□□□ -1.73
CNOT4-206ENST00000428680 KRTAP17-1Q9BYP8 105 aa4.21□□□□□ -1.74
CNOT4-206ENST00000428680 MIR22HGQ0VDD5 57 aa4.21□□□□□ -1.74
CNOT4-206ENST00000428680 M0QZ58 72 aa4.2□□□□□ -1.74
CNOT4-206ENST00000428680 LINC00483Q53H64 154 aa4.19□□□□□ -1.74
CNOT4-206ENST00000428680 SACSQ9NZJ4 4579 aa4.19□□□□□ -1.74
CNOT4-206ENST00000428680 DNAH2Q9P225 4427 aa4.19□□□□□ -1.74
CNOT4-206ENST00000428680 HERC2O95714 4834 aa4.19□□□□□ -1.74
CNOT4-206ENST00000428680 CDC42SE1Q9NRR8 79 aa4.18□□□□□ -1.74
CNOT4-206ENST00000428680 RPS29P62273 56 aaKnown RBP4.17□□□□□ -1.74
CNOT4-206ENST00000428680 A0A1B0GU33 70 aa4.17□□□□□ -1.74
CNOT4-206ENST00000428680 Q8N9P0 234 aaPredicted RBP4.17□□□□□ -1.74
CNOT4-206ENST00000428680 DYNC1H1Q14204 4646 aaKnown RBP4.17□□□□□ -1.74
CNOT4-206ENST00000428680 PRO0461Q9UI25 63 aa4.17□□□□□ -1.74
CNOT4-206ENST00000428680 MMP24-AS1A0A0U1RRL7 71 aa4.15□□□□□ -1.74
CNOT4-206ENST00000428680 Q5W150 140 aa4.15□□□□□ -1.74
CNOT4-206ENST00000428680 RYR3Q15413 4870 aa4.15□□□□□ -1.75
CNOT4-206ENST00000428680 Q8NDZ9 215 aa4.15□□□□□ -1.75
CNOT4-206ENST00000428680 PKD1P98161 4303 aa4.14□□□□□ -1.75
CNOT4-206ENST00000428680 LINC00472Q9H8W2 130 aa4.14□□□□□ -1.75
CNOT4-206ENST00000428680 CYP4F30PQ9H0H9 118 aa4.13□□□□□ -1.75
CNOT4-206ENST00000428680 H1FX-AS1Q4G0G2 97 aa4.12□□□□□ -1.75
CNOT4-206ENST00000428680 RPL37P61927 97 aaKnown RBP4.11□□□□□ -1.75
CNOT4-206ENST00000428680 SPANXA2-OT1Q8N9U9 137 aa4.1□□□□□ -1.75
CNOT4-206ENST00000428680 Q75L30 129 aa4.09□□□□□ -1.75
CNOT4-206ENST00000428680 DMAC1Q96GE9 116 aa4.09□□□□□ -1.75
CNOT4-206ENST00000428680 LRP1BQ9NZR2 4599 aa4.09□□□□□ -1.75
CNOT4-206ENST00000428680 KRTAP13-2Q52LG2 175 aa4.09□□□□□ -1.75
CNOT4-206ENST00000428680 LUZP6Q538Z0 58 aa4.09□□□□□ -1.76
CNOT4-206ENST00000428680 ADM2Q7Z4H4 148 aa4.09□□□□□ -1.76
CNOT4-206ENST00000428680 RPS28P62857 69 aaKnown RBP4.08□□□□□ -1.76
CNOT4-206ENST00000428680 KRTAP10-8P60410 259 aa4.08□□□□□ -1.76
CNOT4-206ENST00000428680 STARD9Q9P2P6 4700 aa4.08□□□□□ -1.76
CNOT4-206ENST00000428680 KLKP1Q107X0 134 aa4.07□□□□□ -1.76
CNOT4-206ENST00000428680 H7BZZ5 65 aa4.07□□□□□ -1.76
CNOT4-206ENST00000428680 KRTAP10-4P60372 401 aaPredicted RBP4.07□□□□□ -1.76
CNOT4-206ENST00000428680 KRTAP4-5Q9BYR2 181 aa4.07□□□□□ -1.76
CNOT4-206ENST00000428680 MYCBP2O75592 4640 aa4.06□□□□□ -1.76
CNOT4-206ENST00000428680 KMT2CQ8NEZ4 4911 aaKnown RBP4.06□□□□□ -1.76
CNOT4-206ENST00000428680 KRTAP11-1Q8IUC1 163 aa4.05□□□□□ -1.76
CNOT4-206ENST00000428680 KRTAP4-16G5E9R7 235 aaPredicted RBP4.04□□□□□ -1.76
CNOT4-206ENST00000428680 Q1T7F1 81 aa4.04□□□□□ -1.76
CNOT4-206ENST00000428680 KRTAP10-10P60014 251 aa4.03□□□□□ -1.76
CNOT4-206ENST00000428680 ASB16-AS1Q495Z4 193 aa4.03□□□□□ -1.76
CNOT4-206ENST00000428680 TPRXLQ17RH7 258 aa4.03□□□□□ -1.76
CNOT4-206ENST00000428680 A8MUU9 505 aa4.02□□□□□ -1.77
CNOT4-206ENST00000428680 OCR1Q9BZK8 76 aa4.01□□□□□ -1.77
CNOT4-206ENST00000428680 RYR1P21817 5038 aa4.01□□□□□ -1.77
CNOT4-206ENST00000428680 Q5XG85 94 aa4□□□□□ -1.77
CNOT4-206ENST00000428680 MT1HL1P0DM35 61 aa4□□□□□ -1.77
CNOT4-206ENST00000428680 XP32Q5T750 250 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms