RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 NDUFB1O75438 58 aa9.57□□□□□ -0.88
LINC00271-201ENST00000421378 FAM240AA0A1B0GVK7 77 aa9.56□□□□□ -0.88
LINC00271-201ENST00000421378 BPY2O14599 106 aa9.56□□□□□ -0.88
LINC00271-201ENST00000421378 ACYP1P07311 99 aa9.56□□□□□ -0.88
LINC00271-201ENST00000421378 UBR4Q5T4S7 5183 aa9.56□□□□□ -0.88
LINC00271-201ENST00000421378 DSCR10P59022 87 aa9.54□□□□□ -0.88
LINC00271-201ENST00000421378 LINC00313P59037 77 aa9.54□□□□□ -0.88
LINC00271-201ENST00000421378 IGKV3D-7A0A0C4DH55 119 aa9.52□□□□□ -0.89
LINC00271-201ENST00000421378 C8orf87E5RJ46 101 aa9.51□□□□□ -0.89
LINC00271-201ENST00000421378 NOTCH2NLQ7Z3S9 236 aa9.5□□□□□ -0.89
LINC00271-201ENST00000421378 PRR15Q8IV56 129 aa9.5□□□□□ -0.89
LINC00271-201ENST00000421378 J3QR89 54 aa9.49□□□□□ -0.89
LINC00271-201ENST00000421378 K7EQZ3 153 aa9.49□□□□□ -0.89
LINC00271-201ENST00000421378 SEC61BP60468 96 aaKnown RBP9.46□□□□□ -0.9
LINC00271-201ENST00000421378 RPL37P61927 97 aaKnown RBP9.46□□□□□ -0.9
LINC00271-201ENST00000421378 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.9
LINC00271-201ENST00000421378 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.9
LINC00271-201ENST00000421378 KRTAP16-1A8MUX0 517 aa9.45□□□□□ -0.9
LINC00271-201ENST00000421378 Q75L30 129 aa9.45□□□□□ -0.9
LINC00271-201ENST00000421378 Q8N9L7 120 aa9.45□□□□□ -0.9
LINC00271-201ENST00000421378 C8orf17Q9NRJ1 99 aa9.45□□□□□ -0.9
LINC00271-201ENST00000421378 CXCL6P80162 114 aa9.43□□□□□ -0.9
LINC00271-201ENST00000421378 C20orf166-AS1Q96NR2 134 aa9.43□□□□□ -0.9
LINC00271-201ENST00000421378 A8MUU9 505 aa9.41□□□□□ -0.9
LINC00271-201ENST00000421378 MMP24-AS1A0A0U1RRL7 71 aa9.4□□□□□ -0.9
LINC00271-201ENST00000421378 PCOTHQ58A44 107 aa9.38□□□□□ -0.91
LINC00271-201ENST00000421378 ATP5EP2Q5VTU8 51 aa9.38□□□□□ -0.91
LINC00271-201ENST00000421378 MUC17Q685J3 4493 aa9.37□□□□□ -0.91
LINC00271-201ENST00000421378 hDV103S1A0JD37 113 aa9.36□□□□□ -0.91
LINC00271-201ENST00000421378 ATP11AUNQ6ZP68 121 aa9.36□□□□□ -0.91
LINC00271-201ENST00000421378 K7ERU9 68 aa9.35□□□□□ -0.91
LINC00271-201ENST00000421378 LINC00643Q86TS7 51 aa9.35□□□□□ -0.91
LINC00271-201ENST00000421378 TMEM254Q8TBM7 123 aa9.34□□□□□ -0.91
LINC00271-201ENST00000421378 RNF213Q63HN8 5207 aa9.33□□□□□ -0.92
LINC00271-201ENST00000421378 Q8N9P0 234 aaPredicted RBP9.33□□□□□ -0.92
LINC00271-201ENST00000421378 MRPL34Q9BQ48 92 aaKnown RBP9.33□□□□□ -0.92
LINC00271-201ENST00000421378 MUC2Q02817 5179 aa9.32□□□□□ -0.92
LINC00271-201ENST00000421378 CASC2Q6XLA1 102 aa9.32□□□□□ -0.92
LINC00271-201ENST00000421378 WFDC13Q8IUB5 93 aa9.32□□□□□ -0.92
LINC00271-201ENST00000421378 HCG22E2RYF7 251 aa9.31□□□□□ -0.92
LINC00271-201ENST00000421378 HIST1H4AP62805 103 aaKnown RBP9.27□□□□□ -0.93
LINC00271-201ENST00000421378 NDUFS5O43920 106 aa9.25□□□□□ -0.93
LINC00271-201ENST00000421378 KRTAP4-1Q9BYQ7 146 aa9.24□□□□□ -0.93
LINC00271-201ENST00000421378 ZCCHC13Q8WW36 166 aaKnown RBP9.22□□□□□ -0.93
LINC00271-201ENST00000421378 A0A087WVE0 104 aa9.17□□□□□ -0.94
LINC00271-201ENST00000421378 MT-ATP8P03928 68 aa9.1□□□□□ -0.95
LINC00271-201ENST00000421378 TP53AIP1Q9HCN2 124 aa9.1□□□□□ -0.95
LINC00271-201ENST00000421378 A0A0U1RQV1 116 aa9.09□□□□□ -0.95
LINC00271-201ENST00000421378 Q5W150 140 aa9.08□□□□□ -0.96
LINC00271-201ENST00000421378 IMUPQ9GZP8 106 aa9.08□□□□□ -0.96
LINC00271-201ENST00000421378 SPINK7P58062 85 aa9.05□□□□□ -0.96
LINC00271-201ENST00000421378 IGKV2D-30A0A075B6S6 120 aa8.99□□□□□ -0.97
LINC00271-201ENST00000421378 IGKV2-30P06310 120 aa8.99□□□□□ -0.97
LINC00271-201ENST00000421378 C7orf65Q6ZTY9 151 aa8.98□□□□□ -0.97
LINC00271-201ENST00000421378 TRAV22A0A0B4J277 110 aa8.97□□□□□ -0.97
LINC00271-201ENST00000421378 UQCRQO14949 82 aa8.97□□□□□ -0.97
LINC00271-201ENST00000421378 HRES1P13985 223 aa8.97□□□□□ -0.97
LINC00271-201ENST00000421378 KRTAP19-2Q3LHN2 52 aa8.97□□□□□ -0.97
LINC00271-201ENST00000421378 SCGB1A1P11684 91 aa8.96□□□□□ -0.97
LINC00271-201ENST00000421378 FAT4Q6V0I7 4981 aa8.95□□□□□ -0.98
LINC00271-201ENST00000421378 COX6B2Q6YFQ2 88 aa8.95□□□□□ -0.98
LINC00271-201ENST00000421378 OCR1Q9BZK8 76 aa8.95□□□□□ -0.98
LINC00271-201ENST00000421378 FAM236AA0A1B0GUQ0 79 aa8.93□□□□□ -0.98
LINC00271-201ENST00000421378 FAM236BA0A1B0GV22 79 aa8.93□□□□□ -0.98
LINC00271-201ENST00000421378 MPLKIPQ8TAP9 179 aa8.92□□□□□ -0.98
LINC00271-201ENST00000421378 RBM12B-AS1Q9P1G2 102 aa8.92□□□□□ -0.98
LINC00271-201ENST00000421378 LCE2CQ5TA81 110 aa8.9□□□□□ -0.98
LINC00271-201ENST00000421378 H0Y9P7 68 aa8.89□□□□□ -0.99
LINC00271-201ENST00000421378 ATOX1O00244 68 aa8.89□□□□□ -0.99
LINC00271-201ENST00000421378 FAM236DA0A1B0GTK5 79 aa8.87□□□□□ -0.99
LINC00271-201ENST00000421378 FAM236CP0DP71 79 aa8.87□□□□□ -0.99
LINC00271-201ENST00000421378 LOC101927531A0A1B0GV80 90 aa8.86□□□□□ -0.99
LINC00271-201ENST00000421378 MP68P56378 58 aa8.83□□□□□ -1
LINC00271-201ENST00000421378 C5orf47Q569G3 176 aa8.83□□□□□ -1
LINC00271-201ENST00000421378 SMIM20Q8N5G0 67 aa8.82□□□□□ -1
LINC00271-201ENST00000421378 CYP4F30PQ9H0H9 118 aa8.82□□□□□ -1
LINC00271-201ENST00000421378 LCE2AQ5TA79 106 aaPredicted RBP8.8□□□□□ -1
LINC00271-201ENST00000421378 C1orf64Q8NEQ6 169 aa8.8□□□□□ -1
LINC00271-201ENST00000421378 MT1HP80294 61 aa8.79□□□□□ -1
LINC00271-201ENST00000421378 LINC00208Q96KT6 92 aa8.79□□□□□ -1
LINC00271-201ENST00000421378 C4orf26Q17RF5 130 aa8.78□□□□□ -1
LINC00271-201ENST00000421378 TRAV7A0A075B6U4 112 aa8.77□□□□□ -1.01
LINC00271-201ENST00000421378 H3BPC8 53 aa8.75□□□□□ -1.01
LINC00271-201ENST00000421378 FLGP20930 4061 aaPredicted RBP8.72□□□□□ -1.01
LINC00271-201ENST00000421378 M0R2T5 61 aa8.69□□□□□ -1.02
LINC00271-201ENST00000421378 H1FX-AS1Q4G0G2 97 aa8.67□□□□□ -1.02
LINC00271-201ENST00000421378 SERP2Q8N6R1 65 aa8.67□□□□□ -1.02
LINC00271-201ENST00000421378 KLKP1Q107X0 134 aa8.66□□□□□ -1.02
LINC00271-201ENST00000421378 KRTAP3-1Q9BYR8 98 aa8.62□□□□□ -1.03
LINC00271-201ENST00000421378 C20orf197Q8N268 126 aa8.56□□□□□ -1.04
LINC00271-201ENST00000421378 SNURFQ9Y675 71 aa8.56□□□□□ -1.04
LINC00271-201ENST00000421378 COX7CP15954 63 aa8.54□□□□□ -1.04
LINC00271-201ENST00000421378 KRTAP10-6P60371 365 aaPredicted RBP8.54□□□□□ -1.04
LINC00271-201ENST00000421378 A8MUN3 132 aa8.52□□□□□ -1.04
LINC00271-201ENST00000421378 LORP23490 312 aaPredicted RBP8.52□□□□□ -1.05
LINC00271-201ENST00000421378 ANAPC13Q9BS18 74 aa8.52□□□□□ -1.05
LINC00271-201ENST00000421378 S4R3F8 94 aa8.51□□□□□ -1.05
LINC00271-201ENST00000421378 LCA10Q71F78 164 aa8.45□□□□□ -1.06
LINC00271-201ENST00000421378 DMAC1Q96GE9 116 aa8.44□□□□□ -1.06
LINC00271-201ENST00000421378 KRTAP9-8Q9BYQ0 159 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms