RNA–Protein interactions for RNA: ENST00000421368.2

MSL3-208, Transcript of MSL complex subunit 3, humanhuman

TSL 5

Gene MSL3, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-208ENST00000421368 LINC00313P59037 77 aa9.41□□□□□ -0.9
MSL3-208ENST00000421368 NOTCH2NLQ7Z3S9 236 aa9.41□□□□□ -0.9
MSL3-208ENST00000421368 ATP11AUNQ6ZP68 121 aa9.4□□□□□ -0.9
MSL3-208ENST00000421368 IGHV6-1A0A0B4J1U7 121 aa9.39□□□□□ -0.91
MSL3-208ENST00000421368 KRTAP16-1A8MUX0 517 aa9.39□□□□□ -0.91
MSL3-208ENST00000421368 KRTAP19-2Q3LHN2 52 aa9.38□□□□□ -0.91
MSL3-208ENST00000421368 J3KT08 172 aa9.37□□□□□ -0.91
MSL3-208ENST00000421368 A0A1B0GVX0 72 aa9.36□□□□□ -0.91
MSL3-208ENST00000421368 SMCPP49901 116 aaPredicted RBP9.36□□□□□ -0.91
MSL3-208ENST00000421368 LCE2CQ5TA81 110 aa9.35□□□□□ -0.91
MSL3-208ENST00000421368 LCE2DQ5TA82 110 aaPredicted RBP9.34□□□□□ -0.91
MSL3-208ENST00000421368 KRTAP3-3Q9BYR6 98 aa9.34□□□□□ -0.91
MSL3-208ENST00000421368 KRTAP3-2Q9BYR7 98 aa9.34□□□□□ -0.91
MSL3-208ENST00000421368 K7EP34 96 aa9.33□□□□□ -0.92
MSL3-208ENST00000421368 C8orf87E5RJ46 101 aa9.32□□□□□ -0.92
MSL3-208ENST00000421368 PRO0461Q9UI25 63 aa9.32□□□□□ -0.92
MSL3-208ENST00000421368 NREPQ16612 68 aa9.29□□□□□ -0.92
MSL3-208ENST00000421368 A8MWP4 228 aa9.28□□□□□ -0.92
MSL3-208ENST00000421368 NDUFB1O75438 58 aa9.27□□□□□ -0.93
MSL3-208ENST00000421368 IGKV3D-7A0A0C4DH55 119 aa9.26□□□□□ -0.93
MSL3-208ENST00000421368 GTF2H5Q6ZYL4 71 aa9.23□□□□□ -0.93
MSL3-208ENST00000421368 FLGP20930 4061 aaPredicted RBP9.22□□□□□ -0.93
MSL3-208ENST00000421368 C8orf17Q9NRJ1 99 aa9.22□□□□□ -0.93
MSL3-208ENST00000421368 MT1HP80294 61 aa9.2□□□□□ -0.94
MSL3-208ENST00000421368 PRR15Q8IV56 129 aa9.2□□□□□ -0.94
MSL3-208ENST00000421368 COX6B2Q6YFQ2 88 aa9.18□□□□□ -0.94
MSL3-208ENST00000421368 Q6ZVQ6 151 aa9.17□□□□□ -0.94
MSL3-208ENST00000421368 Q8N9P0 234 aaPredicted RBP9.17□□□□□ -0.94
MSL3-208ENST00000421368 F8W1H4 67 aa9.15□□□□□ -0.94
MSL3-208ENST00000421368 K7EQZ3 153 aa9.15□□□□□ -0.94
MSL3-208ENST00000421368 BPY2O14599 106 aa9.15□□□□□ -0.94
MSL3-208ENST00000421368 MMP24-AS1A0A0U1RRL7 71 aa9.14□□□□□ -0.95
MSL3-208ENST00000421368 ZCCHC13Q8WW36 166 aaKnown RBP9.13□□□□□ -0.95
MSL3-208ENST00000421368 LINC00846Q9NV44 126 aa9.11□□□□□ -0.95
MSL3-208ENST00000421368 ETDBQ3ZM63 59 aa9.1□□□□□ -0.95
MSL3-208ENST00000421368 TMEM254Q8TBM7 123 aa9.09□□□□□ -0.95
MSL3-208ENST00000421368 Q8N9L7 120 aa9.07□□□□□ -0.96
MSL3-208ENST00000421368 MRPL34Q9BQ48 92 aaKnown RBP9.07□□□□□ -0.96
MSL3-208ENST00000421368 UBL5Q9BZL1 73 aa9.07□□□□□ -0.96
MSL3-208ENST00000421368 hDV103S1A0JD37 113 aa9.06□□□□□ -0.96
MSL3-208ENST00000421368 HRES1P13985 223 aa9.06□□□□□ -0.96
MSL3-208ENST00000421368 MPLKIPQ8TAP9 179 aa9.03□□□□□ -0.96
MSL3-208ENST00000421368 M0R2T5 61 aa9.02□□□□□ -0.97
MSL3-208ENST00000421368 KRTAP9-2Q9BYQ4 174 aa9.01□□□□□ -0.97
MSL3-208ENST00000421368 SPINK7P58062 85 aa9□□□□□ -0.97
MSL3-208ENST00000421368 WFDC13Q8IUB5 93 aa9□□□□□ -0.97
MSL3-208ENST00000421368 KRTAP10-6P60371 365 aaPredicted RBP8.99□□□□□ -0.97
MSL3-208ENST00000421368 NDUFS5O43920 106 aa8.98□□□□□ -0.97
MSL3-208ENST00000421368 LORP23490 312 aaPredicted RBP8.98□□□□□ -0.97
MSL3-208ENST00000421368 CASC2Q6XLA1 102 aa8.97□□□□□ -0.97
MSL3-208ENST00000421368 RBM12B-AS1Q9P1G2 102 aa8.97□□□□□ -0.97
MSL3-208ENST00000421368 FAM236DA0A1B0GTK5 79 aa8.96□□□□□ -0.98
MSL3-208ENST00000421368 FAM236CP0DP71 79 aa8.96□□□□□ -0.98
MSL3-208ENST00000421368 A0A1B0GV90 55 aa8.91□□□□□ -0.98
MSL3-208ENST00000421368 HCG22E2RYF7 251 aa8.9□□□□□ -0.98
MSL3-208ENST00000421368 CXCL6P80162 114 aa8.9□□□□□ -0.98
MSL3-208ENST00000421368 Q5W150 140 aa8.89□□□□□ -0.99
MSL3-208ENST00000421368 ACYP1P07311 99 aa8.85□□□□□ -0.99
MSL3-208ENST00000421368 FAM240AA0A1B0GVK7 77 aa8.84□□□□□ -0.99
MSL3-208ENST00000421368 IGKV2D-30A0A075B6S6 120 aa8.81□□□□□ -1
MSL3-208ENST00000421368 IGKV2-30P06310 120 aa8.81□□□□□ -1
MSL3-208ENST00000421368 C7orf65Q6ZTY9 151 aa8.79□□□□□ -1
MSL3-208ENST00000421368 KRTAP9-8Q9BYQ0 159 aa8.75□□□□□ -1.01
MSL3-208ENST00000421368 ATP5EP2Q5VTU8 51 aa8.74□□□□□ -1.01
MSL3-208ENST00000421368 TP53AIP1Q9HCN2 124 aa8.71□□□□□ -1.02
MSL3-208ENST00000421368 HIST1H4AP62805 103 aaKnown RBP8.67□□□□□ -1.02
MSL3-208ENST00000421368 LINC00643Q86TS7 51 aa8.67□□□□□ -1.02
MSL3-208ENST00000421368 H1FX-AS1Q4G0G2 97 aa8.66□□□□□ -1.02
MSL3-208ENST00000421368 MT2AP02795 61 aa8.65□□□□□ -1.02
MSL3-208ENST00000421368 C4orf26Q17RF5 130 aa8.64□□□□□ -1.03
MSL3-208ENST00000421368 SVIPQ8NHG7 77 aa8.64□□□□□ -1.03
MSL3-208ENST00000421368 KRTAP9-6A0A140TA67 174 aa8.62□□□□□ -1.03
MSL3-208ENST00000421368 A0A087WVE0 104 aa8.6□□□□□ -1.03
MSL3-208ENST00000421368 MT1FP04733 61 aa8.59□□□□□ -1.03
MSL3-208ENST00000421368 FSIP2Q5CZC0 6907 aa8.58□□□□□ -1.04
MSL3-208ENST00000421368 J3QR89 54 aa8.57□□□□□ -1.04
MSL3-208ENST00000421368 TRAV22A0A0B4J277 110 aa8.56□□□□□ -1.04
MSL3-208ENST00000421368 KRTAP3-1Q9BYR8 98 aa8.54□□□□□ -1.04
MSL3-208ENST00000421368 CRCT1Q9UGL9 99 aa8.54□□□□□ -1.04
MSL3-208ENST00000421368 KRTAP10-10P60014 251 aa8.53□□□□□ -1.04
MSL3-208ENST00000421368 CYP4F30PQ9H0H9 118 aa8.52□□□□□ -1.05
MSL3-208ENST00000421368 UQCRQO14949 82 aa8.51□□□□□ -1.05
MSL3-208ENST00000421368 C1orf64Q8NEQ6 169 aa8.5□□□□□ -1.05
MSL3-208ENST00000421368 LOC101927531A0A1B0GV80 90 aa8.49□□□□□ -1.05
MSL3-208ENST00000421368 H0Y9P7 68 aa8.47□□□□□ -1.05
MSL3-208ENST00000421368 KRTAP9-3Q9BYQ3 159 aa8.47□□□□□ -1.05
MSL3-208ENST00000421368 USH2AO75445 5202 aa8.45□□□□□ -1.06
MSL3-208ENST00000421368 ATOX1O00244 68 aa8.44□□□□□ -1.06
MSL3-208ENST00000421368 OCR1Q9BZK8 76 aa8.42□□□□□ -1.06
MSL3-208ENST00000421368 S4R3F8 94 aa8.41□□□□□ -1.06
MSL3-208ENST00000421368 LCE2BO14633 110 aa8.39□□□□□ -1.07
MSL3-208ENST00000421368 C5orf47Q569G3 176 aa8.38□□□□□ -1.07
MSL3-208ENST00000421368 LCA10Q71F78 164 aa8.37□□□□□ -1.07
MSL3-208ENST00000421368 K7ERU9 68 aa8.36□□□□□ -1.07
MSL3-208ENST00000421368 LINC00208Q96KT6 92 aa8.35□□□□□ -1.07
MSL3-208ENST00000421368 SSPOA2VEC9 5147 aa8.33□□□□□ -1.08
MSL3-208ENST00000421368 MP68P56378 58 aa8.32□□□□□ -1.08
MSL3-208ENST00000421368 MT-ATP8P03928 68 aa8.31□□□□□ -1.08
MSL3-208ENST00000421368 KLKP1Q107X0 134 aa8.3□□□□□ -1.08
MSL3-208ENST00000421368 CSAG1Q6PB30 78 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms