RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 J3KT08 172 aa10.92□□□□□ -0.66
EGFR-204ENST00000420316 LINC00846Q9NV44 126 aa10.91□□□□□ -0.66
EGFR-204ENST00000420316 A0A1B0GVX0 72 aa10.9□□□□□ -0.66
EGFR-204ENST00000420316 Q6ZVQ6 151 aa10.9□□□□□ -0.66
EGFR-204ENST00000420316 LINC00313P59037 77 aa10.9□□□□□ -0.67
EGFR-204ENST00000420316 RPL37P61927 97 aaKnown RBP10.89□□□□□ -0.67
EGFR-204ENST00000420316 PCOTHQ58A44 107 aa10.89□□□□□ -0.67
EGFR-204ENST00000420316 IGKV3D-7A0A0C4DH55 119 aa10.86□□□□□ -0.67
EGFR-204ENST00000420316 KRTAP4-1Q9BYQ7 146 aa10.86□□□□□ -0.67
EGFR-204ENST00000420316 KRTAP16-1A8MUX0 517 aa10.85□□□□□ -0.67
EGFR-204ENST00000420316 A8MWP4 228 aa10.85□□□□□ -0.67
EGFR-204ENST00000420316 NDUFB1O75438 58 aa10.84□□□□□ -0.67
EGFR-204ENST00000420316 BPY2O14599 106 aa10.83□□□□□ -0.68
EGFR-204ENST00000420316 Q75L30 129 aa10.83□□□□□ -0.68
EGFR-204ENST00000420316 UBL5Q9BZL1 73 aa10.82□□□□□ -0.68
EGFR-204ENST00000420316 K7EQZ3 153 aa10.81□□□□□ -0.68
EGFR-204ENST00000420316 C8orf87E5RJ46 101 aa10.8□□□□□ -0.68
EGFR-204ENST00000420316 Q8N9L7 120 aa10.8□□□□□ -0.68
EGFR-204ENST00000420316 C20orf166-AS1Q96NR2 134 aa10.8□□□□□ -0.68
EGFR-204ENST00000420316 A8MUU9 505 aa10.78□□□□□ -0.68
EGFR-204ENST00000420316 PRR15Q8IV56 129 aa10.78□□□□□ -0.68
EGFR-204ENST00000420316 C8orf17Q9NRJ1 99 aa10.78□□□□□ -0.68
EGFR-204ENST00000420316 A0A0U1RQV1 116 aa10.75□□□□□ -0.69
EGFR-204ENST00000420316 ATP11AUNQ6ZP68 121 aa10.74□□□□□ -0.69
EGFR-204ENST00000420316 MMP24-AS1A0A0U1RRL7 71 aa10.72□□□□□ -0.69
EGFR-204ENST00000420316 FAT4Q6V0I7 4981 aa10.67□□□□□ -0.7
EGFR-204ENST00000420316 ACYP1P07311 99 aa10.66□□□□□ -0.7
EGFR-204ENST00000420316 WFDC13Q8IUB5 93 aa10.65□□□□□ -0.7
EGFR-204ENST00000420316 FAM240AA0A1B0GVK7 77 aa10.65□□□□□ -0.71
EGFR-204ENST00000420316 hDV103S1A0JD37 113 aa10.63□□□□□ -0.71
EGFR-204ENST00000420316 Q8N9P0 234 aaPredicted RBP10.62□□□□□ -0.71
EGFR-204ENST00000420316 TMEM254Q8TBM7 123 aa10.61□□□□□ -0.71
EGFR-204ENST00000420316 MRPL34Q9BQ48 92 aaKnown RBP10.61□□□□□ -0.71
EGFR-204ENST00000420316 CXCL6P80162 114 aa10.59□□□□□ -0.71
EGFR-204ENST00000420316 CASC2Q6XLA1 102 aa10.58□□□□□ -0.72
EGFR-204ENST00000420316 NDUFS5O43920 106 aa10.56□□□□□ -0.72
EGFR-204ENST00000420316 ZCCHC13Q8WW36 166 aaKnown RBP10.55□□□□□ -0.72
EGFR-204ENST00000420316 HCG22E2RYF7 251 aa10.53□□□□□ -0.72
EGFR-204ENST00000420316 J3QR89 54 aa10.51□□□□□ -0.73
EGFR-204ENST00000420316 KRTAP19-2Q3LHN2 52 aa10.48□□□□□ -0.73
EGFR-204ENST00000420316 LINC00643Q86TS7 51 aa10.48□□□□□ -0.73
EGFR-204ENST00000420316 HIST1H4AP62805 103 aaKnown RBP10.47□□□□□ -0.73
EGFR-204ENST00000420316 LCE2AQ5TA79 106 aaPredicted RBP10.47□□□□□ -0.73
EGFR-204ENST00000420316 ATP5EP2Q5VTU8 51 aa10.46□□□□□ -0.74
EGFR-204ENST00000420316 LCE2CQ5TA81 110 aa10.45□□□□□ -0.74
EGFR-204ENST00000420316 Q5W150 140 aa10.43□□□□□ -0.74
EGFR-204ENST00000420316 A0A087WVE0 104 aa10.41□□□□□ -0.74
EGFR-204ENST00000420316 SPINK7P58062 85 aa10.38□□□□□ -0.75
EGFR-204ENST00000420316 COX6B2Q6YFQ2 88 aa10.36□□□□□ -0.75
EGFR-204ENST00000420316 K7ERU9 68 aa10.35□□□□□ -0.75
EGFR-204ENST00000420316 HRES1P13985 223 aa10.35□□□□□ -0.75
EGFR-204ENST00000420316 IGKV2D-30A0A075B6S6 120 aa10.29□□□□□ -0.76
EGFR-204ENST00000420316 IGKV2-30P06310 120 aa10.29□□□□□ -0.76
EGFR-204ENST00000420316 MT1HP80294 61 aa10.29□□□□□ -0.76
EGFR-204ENST00000420316 MPLKIPQ8TAP9 179 aa10.28□□□□□ -0.76
EGFR-204ENST00000420316 FLGP20930 4061 aaPredicted RBP10.27□□□□□ -0.77
EGFR-204ENST00000420316 RBM12B-AS1Q9P1G2 102 aa10.25□□□□□ -0.77
EGFR-204ENST00000420316 MT-ATP8P03928 68 aa10.24□□□□□ -0.77
EGFR-204ENST00000420316 TP53AIP1Q9HCN2 124 aa10.24□□□□□ -0.77
EGFR-204ENST00000420316 FAM236DA0A1B0GTK5 79 aa10.23□□□□□ -0.77
EGFR-204ENST00000420316 FAM236CP0DP71 79 aa10.23□□□□□ -0.77
EGFR-204ENST00000420316 C7orf65Q6ZTY9 151 aa10.21□□□□□ -0.78
EGFR-204ENST00000420316 M0R2T5 61 aa10.13□□□□□ -0.79
EGFR-204ENST00000420316 TRAV22A0A0B4J277 110 aa10.12□□□□□ -0.79
EGFR-204ENST00000420316 UQCRQO14949 82 aa10.11□□□□□ -0.79
EGFR-204ENST00000420316 H0Y9P7 68 aa10.08□□□□□ -0.8
EGFR-204ENST00000420316 OCR1Q9BZK8 76 aa10.08□□□□□ -0.8
EGFR-204ENST00000420316 C4orf26Q17RF5 130 aa10.07□□□□□ -0.8
EGFR-204ENST00000420316 IMUPQ9GZP8 106 aa10.07□□□□□ -0.8
EGFR-204ENST00000420316 SCGB1A1P11684 91 aa10.05□□□□□ -0.8
EGFR-204ENST00000420316 KRTAP10-6P60371 365 aaPredicted RBP10.03□□□□□ -0.8
EGFR-204ENST00000420316 CYP4F30PQ9H0H9 118 aa10.02□□□□□ -0.81
EGFR-204ENST00000420316 LORP23490 312 aaPredicted RBP10.01□□□□□ -0.81
EGFR-204ENST00000420316 FAM236AA0A1B0GUQ0 79 aa10.01□□□□□ -0.81
EGFR-204ENST00000420316 FAM236BA0A1B0GV22 79 aa10.01□□□□□ -0.81
EGFR-204ENST00000420316 LOC101927531A0A1B0GV80 90 aa9.99□□□□□ -0.81
EGFR-204ENST00000420316 LINC00208Q96KT6 92 aa9.97□□□□□ -0.81
EGFR-204ENST00000420316 ATOX1O00244 68 aa9.97□□□□□ -0.81
EGFR-204ENST00000420316 C1orf64Q8NEQ6 169 aa9.97□□□□□ -0.81
EGFR-204ENST00000420316 H1FX-AS1Q4G0G2 97 aa9.93□□□□□ -0.82
EGFR-204ENST00000420316 KRTAP3-1Q9BYR8 98 aa9.92□□□□□ -0.82
EGFR-204ENST00000420316 MP68P56378 58 aa9.92□□□□□ -0.82
EGFR-204ENST00000420316 C5orf47Q569G3 176 aa9.9□□□□□ -0.82
EGFR-204ENST00000420316 KLKP1Q107X0 134 aa9.88□□□□□ -0.83
EGFR-204ENST00000420316 TRAV7A0A075B6U4 112 aa9.84□□□□□ -0.83
EGFR-204ENST00000420316 KRTAP9-2Q9BYQ4 174 aa9.83□□□□□ -0.84
EGFR-204ENST00000420316 KRTAP9-8Q9BYQ0 159 aa9.81□□□□□ -0.84
EGFR-204ENST00000420316 LCE2DQ5TA82 110 aaPredicted RBP9.8□□□□□ -0.84
EGFR-204ENST00000420316 SMIM20Q8N5G0 67 aa9.8□□□□□ -0.84
EGFR-204ENST00000420316 H3BPC8 53 aa9.78□□□□□ -0.84
EGFR-204ENST00000420316 S4R3F8 94 aa9.73□□□□□ -0.85
EGFR-204ENST00000420316 MT2AP02795 61 aa9.7□□□□□ -0.86
EGFR-204ENST00000420316 LCA10Q71F78 164 aa9.7□□□□□ -0.86
EGFR-204ENST00000420316 SNURFQ9Y675 71 aa9.68□□□□□ -0.86
EGFR-204ENST00000420316 SERP2Q8N6R1 65 aa9.67□□□□□ -0.86
EGFR-204ENST00000420316 MT1FP04733 61 aa9.64□□□□□ -0.87
EGFR-204ENST00000420316 C20orf197Q8N268 126 aa9.63□□□□□ -0.87
EGFR-204ENST00000420316 KRTAP3-3Q9BYR6 98 aa9.6□□□□□ -0.87
EGFR-204ENST00000420316 KRTAP10-10P60014 251 aa9.59□□□□□ -0.87
EGFR-204ENST00000420316 A8MUN3 132 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 180.8 ms