RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 Q6ZQT0 140 aa8.42□□□□□ -1.06
LINC00404-201ENST00000418660 FLGP20930 4061 aaPredicted RBP8.41□□□□□ -1.06
LINC00404-201ENST00000418660 J3KT08 172 aa8.41□□□□□ -1.06
LINC00404-201ENST00000418660 LYRM7Q5U5X0 104 aa8.39□□□□□ -1.07
LINC00404-201ENST00000418660 LOC110117498A0A087WWA1 95 aa8.38□□□□□ -1.07
LINC00404-201ENST00000418660 A0A1B0GW54 56 aa8.38□□□□□ -1.07
LINC00404-201ENST00000418660 TSTD3H0UI37 97 aa8.38□□□□□ -1.07
LINC00404-201ENST00000418660 PDE6GP18545 87 aa8.37□□□□□ -1.07
LINC00404-201ENST00000418660 CRCT1Q9UGL9 99 aa8.35□□□□□ -1.07
LINC00404-201ENST00000418660 NDUFB1O75438 58 aa8.34□□□□□ -1.07
LINC00404-201ENST00000418660 BATFQ16520 125 aa8.34□□□□□ -1.07
LINC00404-201ENST00000418660 C14orf132Q9NPU4 83 aa8.32□□□□□ -1.08
LINC00404-201ENST00000418660 HRES1P13985 223 aa8.3□□□□□ -1.08
LINC00404-201ENST00000418660 FAM236DA0A1B0GTK5 79 aa8.29□□□□□ -1.08
LINC00404-201ENST00000418660 A8MWP4 228 aa8.29□□□□□ -1.08
LINC00404-201ENST00000418660 FAM236CP0DP71 79 aa8.29□□□□□ -1.08
LINC00404-201ENST00000418660 MPLKIPQ8TAP9 179 aa8.29□□□□□ -1.08
LINC00404-201ENST00000418660 RBM12B-AS1Q9P1G2 102 aa8.29□□□□□ -1.08
LINC00404-201ENST00000418660 C9orf118A6NHY6 69 aa8.28□□□□□ -1.08
LINC00404-201ENST00000418660 ZCCHC13Q8WW36 166 aaKnown RBP8.28□□□□□ -1.08
LINC00404-201ENST00000418660 Q8N9P0 234 aaPredicted RBP8.27□□□□□ -1.09
LINC00404-201ENST00000418660 C8orf17Q9NRJ1 99 aa8.27□□□□□ -1.09
LINC00404-201ENST00000418660 IGKV3D-7A0A0C4DH55 119 aa8.25□□□□□ -1.09
LINC00404-201ENST00000418660 TAX1BP3O14907 124 aa8.25□□□□□ -1.09
LINC00404-201ENST00000418660 NREPQ16612 68 aa8.25□□□□□ -1.09
LINC00404-201ENST00000418660 PCP4L1A6NKN8 68 aa8.24□□□□□ -1.09
LINC00404-201ENST00000418660 H3BT86 120 aa8.24□□□□□ -1.09
LINC00404-201ENST00000418660 FSIP2Q5CZC0 6907 aa8.23□□□□□ -1.09
LINC00404-201ENST00000418660 A0A1W2PPM0 123 aa8.23□□□□□ -1.09
LINC00404-201ENST00000418660 KRTAP9-8Q9BYQ0 159 aa8.23□□□□□ -1.09
LINC00404-201ENST00000418660 PRR15Q8IV56 129 aa8.22□□□□□ -1.09
LINC00404-201ENST00000418660 SPINK7P58062 85 aa8.21□□□□□ -1.1
LINC00404-201ENST00000418660 Q6ZVQ6 151 aa8.19□□□□□ -1.1
LINC00404-201ENST00000418660 MTURNQ8N3F0 131 aa8.18□□□□□ -1.1
LINC00404-201ENST00000418660 MMP24-AS1A0A0U1RRL7 71 aa8.14□□□□□ -1.11
LINC00404-201ENST00000418660 TMEM254Q8TBM7 123 aa8.14□□□□□ -1.11
LINC00404-201ENST00000418660 MRPL34Q9BQ48 92 aaKnown RBP8.13□□□□□ -1.11
LINC00404-201ENST00000418660 K7EQZ3 153 aa8.11□□□□□ -1.11
LINC00404-201ENST00000418660 SPCS1Q9Y6A9 102 aa8.11□□□□□ -1.11
LINC00404-201ENST00000418660 MT2AP02795 61 aa8.1□□□□□ -1.11
LINC00404-201ENST00000418660 hDV103S1A0JD37 113 aa8.09□□□□□ -1.11
LINC00404-201ENST00000418660 BPY2O14599 106 aa8.09□□□□□ -1.11
LINC00404-201ENST00000418660 WFDC13Q8IUB5 93 aa8.08□□□□□ -1.12
LINC00404-201ENST00000418660 SMCPP49901 116 aaPredicted RBP8.06□□□□□ -1.12
LINC00404-201ENST00000418660 NDUFS5O43920 106 aa8.05□□□□□ -1.12
LINC00404-201ENST00000418660 COL5A1-AS1Q5SY13 56 aa8.05□□□□□ -1.12
LINC00404-201ENST00000418660 MT1FP04733 61 aa8.03□□□□□ -1.12
LINC00404-201ENST00000418660 KRTAP10-10P60014 251 aa8□□□□□ -1.13
LINC00404-201ENST00000418660 Q8N9L7 120 aa7.99□□□□□ -1.13
LINC00404-201ENST00000418660 PRO0461Q9UI25 63 aa7.99□□□□□ -1.13
LINC00404-201ENST00000418660 K7EP34 96 aa7.98□□□□□ -1.13
LINC00404-201ENST00000418660 CASC2Q6XLA1 102 aa7.97□□□□□ -1.13
LINC00404-201ENST00000418660 KRTAP9-3Q9BYQ3 159 aa7.97□□□□□ -1.13
LINC00404-201ENST00000418660 Q5W150 140 aa7.96□□□□□ -1.14
LINC00404-201ENST00000418660 UBL5Q9BZL1 73 aa7.95□□□□□ -1.14
LINC00404-201ENST00000418660 LINC00846Q9NV44 126 aa7.95□□□□□ -1.14
LINC00404-201ENST00000418660 IGKV2D-30A0A075B6S6 120 aa7.93□□□□□ -1.14
LINC00404-201ENST00000418660 HCG22E2RYF7 251 aa7.93□□□□□ -1.14
LINC00404-201ENST00000418660 IGKV2-30P06310 120 aa7.93□□□□□ -1.14
LINC00404-201ENST00000418660 H1FX-AS1Q4G0G2 97 aa7.93□□□□□ -1.14
LINC00404-201ENST00000418660 LCE2BO14633 110 aa7.92□□□□□ -1.14
LINC00404-201ENST00000418660 C7orf65Q6ZTY9 151 aa7.92□□□□□ -1.14
LINC00404-201ENST00000418660 CXCL6P80162 114 aa7.9□□□□□ -1.14
LINC00404-201ENST00000418660 GTF2H5Q6ZYL4 71 aa7.89□□□□□ -1.15
LINC00404-201ENST00000418660 USH2AO75445 5202 aa7.87□□□□□ -1.15
LINC00404-201ENST00000418660 F8W1H4 67 aa7.84□□□□□ -1.15
LINC00404-201ENST00000418660 A0A1B0GV90 55 aa7.82□□□□□ -1.16
LINC00404-201ENST00000418660 SSPOA2VEC9 5147 aa7.81□□□□□ -1.16
LINC00404-201ENST00000418660 C4orf26Q17RF5 130 aa7.8□□□□□ -1.16
LINC00404-201ENST00000418660 ETDBQ3ZM63 59 aa7.8□□□□□ -1.16
LINC00404-201ENST00000418660 KRTAP19-1Q8IUB9 90 aa7.79□□□□□ -1.16
LINC00404-201ENST00000418660 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.77□□□□□ -1.17
LINC00404-201ENST00000418660 KRTAP3-3Q9BYR6 98 aa7.76□□□□□ -1.17
LINC00404-201ENST00000418660 KRTAP3-2Q9BYR7 98 aa7.76□□□□□ -1.17
LINC00404-201ENST00000418660 TP53AIP1Q9HCN2 124 aa7.75□□□□□ -1.17
LINC00404-201ENST00000418660 KRTAP3-1Q9BYR8 98 aa7.69□□□□□ -1.18
LINC00404-201ENST00000418660 KRTAP9-7A8MTY7 169 aa7.67□□□□□ -1.18
LINC00404-201ENST00000418660 C1orf64Q8NEQ6 169 aa7.67□□□□□ -1.18
LINC00404-201ENST00000418660 ACYP1P07311 99 aa7.66□□□□□ -1.18
LINC00404-201ENST00000418660 KRTAP19-6Q3LI70 58 aa7.66□□□□□ -1.18
LINC00404-201ENST00000418660 FCGBPQ9Y6R7 5405 aaPredicted RBP7.65□□□□□ -1.19
LINC00404-201ENST00000418660 C5orf47Q569G3 176 aa7.64□□□□□ -1.19
LINC00404-201ENST00000418660 S4R3F8 94 aa7.63□□□□□ -1.19
LINC00404-201ENST00000418660 FAM240AA0A1B0GVK7 77 aa7.6□□□□□ -1.19
LINC00404-201ENST00000418660 CSAG1Q6PB30 78 aa7.59□□□□□ -1.19
LINC00404-201ENST00000418660 CYP4F30PQ9H0H9 118 aa7.59□□□□□ -1.19
LINC00404-201ENST00000418660 ATP5EP2Q5VTU8 51 aa7.58□□□□□ -1.2
LINC00404-201ENST00000418660 LCA10Q71F78 164 aa7.57□□□□□ -1.2
LINC00404-201ENST00000418660 TRAV22A0A0B4J277 110 aa7.56□□□□□ -1.2
LINC00404-201ENST00000418660 FAM236AA0A1B0GUQ0 79 aa7.54□□□□□ -1.2
LINC00404-201ENST00000418660 FAM236BA0A1B0GV22 79 aa7.54□□□□□ -1.2
LINC00404-201ENST00000418660 LOC101927531A0A1B0GV80 90 aa7.53□□□□□ -1.2
LINC00404-201ENST00000418660 HIST1H4AP62805 103 aaKnown RBP7.53□□□□□ -1.2
LINC00404-201ENST00000418660 UQCRQO14949 82 aa7.49□□□□□ -1.21
LINC00404-201ENST00000418660 K7ERU9 68 aa7.47□□□□□ -1.21
LINC00404-201ENST00000418660 MACF1Q9UPN3 7388 aaKnown RBP7.47□□□□□ -1.21
LINC00404-201ENST00000418660 LINC00643Q86TS7 51 aa7.46□□□□□ -1.22
LINC00404-201ENST00000418660 H0Y9P7 68 aa7.45□□□□□ -1.22
LINC00404-201ENST00000418660 ATOX1O00244 68 aa7.45□□□□□ -1.22
LINC00404-201ENST00000418660 SPRR2GQ9BYE4 73 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms