RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 DSCR8Q96T75 97 aa7.75□□□□□ -1.17
ACTB-202ENST00000414620 MT2AP02795 61 aa7.74□□□□□ -1.17
ACTB-202ENST00000414620 MPLKIPQ8TAP9 179 aa7.74□□□□□ -1.17
ACTB-202ENST00000414620 BAALC-AS2P0C853 105 aa7.71□□□□□ -1.18
ACTB-202ENST00000414620 C9JAW5 83 aa7.69□□□□□ -1.18
ACTB-202ENST00000414620 MT1FP04733 61 aa7.69□□□□□ -1.18
ACTB-202ENST00000414620 ZCCHC13Q8WW36 166 aaKnown RBP7.68□□□□□ -1.18
ACTB-202ENST00000414620 USH2AO75445 5202 aa7.68□□□□□ -1.18
ACTB-202ENST00000414620 J3KT08 172 aa7.67□□□□□ -1.18
ACTB-202ENST00000414620 NAA38Q9BRA0 125 aaKnown RBP7.67□□□□□ -1.18
ACTB-202ENST00000414620 Q6ZQT0 140 aa7.66□□□□□ -1.18
ACTB-202ENST00000414620 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.65□□□□□ -1.18
ACTB-202ENST00000414620 SSPOA2VEC9 5147 aa7.64□□□□□ -1.19
ACTB-202ENST00000414620 SPINK7P58062 85 aa7.64□□□□□ -1.19
ACTB-202ENST00000414620 KRTAP10-10P60014 251 aa7.64□□□□□ -1.19
ACTB-202ENST00000414620 NDUFB1O75438 58 aa7.63□□□□□ -1.19
ACTB-202ENST00000414620 LCE2BO14633 110 aa7.62□□□□□ -1.19
ACTB-202ENST00000414620 ATXN8Q156A1 80 aa7.62□□□□□ -1.19
ACTB-202ENST00000414620 C21orf62-AS1Q17RA5 79 aa7.62□□□□□ -1.19
ACTB-202ENST00000414620 MTURNQ8N3F0 131 aa7.62□□□□□ -1.19
ACTB-202ENST00000414620 C8orf17Q9NRJ1 99 aa7.61□□□□□ -1.19
ACTB-202ENST00000414620 Q8N9P0 234 aaPredicted RBP7.6□□□□□ -1.19
ACTB-202ENST00000414620 KRTAP9-3Q9BYQ3 159 aa7.6□□□□□ -1.19
ACTB-202ENST00000414620 KRTAP9-7A8MTY7 169 aa7.59□□□□□ -1.19
ACTB-202ENST00000414620 A8MWP4 228 aa7.59□□□□□ -1.19
ACTB-202ENST00000414620 JMJD7-PLA2G4BH0Y9G9 81 aa7.59□□□□□ -1.19
ACTB-202ENST00000414620 LYRM7Q5U5X0 104 aa7.59□□□□□ -1.19
ACTB-202ENST00000414620 M0R143 59 aa7.58□□□□□ -1.2
ACTB-202ENST00000414620 C14orf132Q9NPU4 83 aa7.58□□□□□ -1.2
ACTB-202ENST00000414620 LOC110117498A0A087WWA1 95 aa7.57□□□□□ -1.2
ACTB-202ENST00000414620 IGKV3D-7A0A0C4DH55 119 aa7.57□□□□□ -1.2
ACTB-202ENST00000414620 SMIM6P0DI80 62 aa7.57□□□□□ -1.2
ACTB-202ENST00000414620 WFDC13Q8IUB5 93 aa7.57□□□□□ -1.2
ACTB-202ENST00000414620 KRTAP19-1Q8IUB9 90 aa7.56□□□□□ -1.2
ACTB-202ENST00000414620 Q6ZVQ6 151 aa7.53□□□□□ -1.2
ACTB-202ENST00000414620 A0A1B0GW54 56 aa7.52□□□□□ -1.21
ACTB-202ENST00000414620 PDE6GP18545 87 aa7.51□□□□□ -1.21
ACTB-202ENST00000414620 NREPQ16612 68 aa7.5□□□□□ -1.21
ACTB-202ENST00000414620 PRR15Q8IV56 129 aa7.5□□□□□ -1.21
ACTB-202ENST00000414620 MMP24-AS1A0A0U1RRL7 71 aa7.48□□□□□ -1.21
ACTB-202ENST00000414620 BATFQ16520 125 aa7.47□□□□□ -1.21
ACTB-202ENST00000414620 TMEM254Q8TBM7 123 aa7.47□□□□□ -1.21
ACTB-202ENST00000414620 MRPL34Q9BQ48 92 aaKnown RBP7.47□□□□□ -1.21
ACTB-202ENST00000414620 FCGBPQ9Y6R7 5405 aaPredicted RBP7.47□□□□□ -1.21
ACTB-202ENST00000414620 K7EQZ3 153 aa7.44□□□□□ -1.22
ACTB-202ENST00000414620 NDUFS5O43920 106 aa7.44□□□□□ -1.22
ACTB-202ENST00000414620 PCP4L1A6NKN8 68 aa7.43□□□□□ -1.22
ACTB-202ENST00000414620 hDV103S1A0JD37 113 aa7.42□□□□□ -1.22
ACTB-202ENST00000414620 TSTD3H0UI37 97 aa7.38□□□□□ -1.23
ACTB-202ENST00000414620 IGKV2D-30A0A075B6S6 120 aa7.37□□□□□ -1.23
ACTB-202ENST00000414620 H3BT86 120 aa7.37□□□□□ -1.23
ACTB-202ENST00000414620 IGKV2-30P06310 120 aa7.37□□□□□ -1.23
ACTB-202ENST00000414620 H1FX-AS1Q4G0G2 97 aa7.37□□□□□ -1.23
ACTB-202ENST00000414620 BPY2O14599 106 aa7.36□□□□□ -1.23
ACTB-202ENST00000414620 C9orf118A6NHY6 69 aa7.35□□□□□ -1.23
ACTB-202ENST00000414620 KRTAP19-6Q3LI70 58 aa7.34□□□□□ -1.23
ACTB-202ENST00000414620 Q5W150 140 aa7.34□□□□□ -1.23
ACTB-202ENST00000414620 A0A1W2PPM0 123 aa7.33□□□□□ -1.24
ACTB-202ENST00000414620 TAX1BP3O14907 124 aa7.33□□□□□ -1.24
ACTB-202ENST00000414620 Q8N9L7 120 aa7.33□□□□□ -1.24
ACTB-202ENST00000414620 LINC00846Q9NV44 126 aa7.33□□□□□ -1.24
ACTB-202ENST00000414620 C7orf65Q6ZTY9 151 aa7.32□□□□□ -1.24
ACTB-202ENST00000414620 HCG22E2RYF7 251 aa7.29□□□□□ -1.24
ACTB-202ENST00000414620 CASC2Q6XLA1 102 aa7.29□□□□□ -1.24
ACTB-202ENST00000414620 MACF1Q9UPN3 7388 aaKnown RBP7.25□□□□□ -1.25
ACTB-202ENST00000414620 C4orf26Q17RF5 130 aa7.25□□□□□ -1.25
ACTB-202ENST00000414620 SPCS1Q9Y6A9 102 aa7.24□□□□□ -1.25
ACTB-202ENST00000414620 SYNE2Q8WXH0 6885 aaKnown RBP7.23□□□□□ -1.25
ACTB-202ENST00000414620 SMCPP49901 116 aaPredicted RBP7.21□□□□□ -1.26
ACTB-202ENST00000414620 CXCL6P80162 114 aa7.19□□□□□ -1.26
ACTB-202ENST00000414620 C5orf47Q569G3 176 aa7.17□□□□□ -1.26
ACTB-202ENST00000414620 UBL5Q9BZL1 73 aa7.14□□□□□ -1.27
ACTB-202ENST00000414620 FAM236AA0A1B0GUQ0 79 aa7.13□□□□□ -1.27
ACTB-202ENST00000414620 FAM236BA0A1B0GV22 79 aa7.13□□□□□ -1.27
ACTB-202ENST00000414620 KRTAP3-1Q9BYR8 98 aa7.11□□□□□ -1.27
ACTB-202ENST00000414620 PRO0461Q9UI25 63 aa7.11□□□□□ -1.27
ACTB-202ENST00000414620 S4R3F8 94 aa7.11□□□□□ -1.27
ACTB-202ENST00000414620 C1orf64Q8NEQ6 169 aa7.08□□□□□ -1.28
ACTB-202ENST00000414620 A0A1B0GV90 55 aa7.07□□□□□ -1.28
ACTB-202ENST00000414620 K7EP34 96 aa7.07□□□□□ -1.28
ACTB-202ENST00000414620 KRTAP6-3Q3LI67 103 aa7.07□□□□□ -1.28
ACTB-202ENST00000414620 COL5A1-AS1Q5SY13 56 aa7.06□□□□□ -1.28
ACTB-202ENST00000414620 LCA10Q71F78 164 aa7.06□□□□□ -1.28
ACTB-202ENST00000414620 CSAG1Q6PB30 78 aa7.03□□□□□ -1.28
ACTB-202ENST00000414620 MT1BP07438 61 aa7.02□□□□□ -1.29
ACTB-202ENST00000414620 A6NN06 94 aa6.99□□□□□ -1.29
ACTB-202ENST00000414620 Q5VV11 94 aa6.99□□□□□ -1.29
ACTB-202ENST00000414620 TP53AIP1Q9HCN2 124 aa6.99□□□□□ -1.29
ACTB-202ENST00000414620 SPRR2GQ9BYE4 73 aa6.96□□□□□ -1.3
ACTB-202ENST00000414620 KRTAP19-8Q3LI54 63 aa6.95□□□□□ -1.3
ACTB-202ENST00000414620 GTF2H5Q6ZYL4 71 aa6.94□□□□□ -1.3
ACTB-202ENST00000414620 KLKP1Q107X0 134 aa6.93□□□□□ -1.3
ACTB-202ENST00000414620 ETDBQ3ZM63 59 aa6.93□□□□□ -1.3
ACTB-202ENST00000414620 KRTAP3-3Q9BYR6 98 aa6.93□□□□□ -1.3
ACTB-202ENST00000414620 A0A087WVE0 104 aa6.91□□□□□ -1.3
ACTB-202ENST00000414620 CYP4F30PQ9H0H9 118 aa6.91□□□□□ -1.3
ACTB-202ENST00000414620 F8W1H4 67 aa6.89□□□□□ -1.31
ACTB-202ENST00000414620 KRTAP10-5P60370 271 aa6.87□□□□□ -1.31
ACTB-202ENST00000414620 TRAV22A0A0B4J277 110 aa6.86□□□□□ -1.31
ACTB-202ENST00000414620 LOC101927531A0A1B0GV80 90 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms