RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 UBE2V1Q13404 147 aa9.45□□□□□ -0.9
CPSF7-204ENST00000413232 KRTAP19-1Q8IUB9 90 aa9.45□□□□□ -0.9
CPSF7-204ENST00000413232 PYY3Q5JQD4 70 aa9.44□□□□□ -0.9
CPSF7-204ENST00000413232 A0A1B0GVX0 72 aa9.43□□□□□ -0.9
CPSF7-204ENST00000413232 COX6CP09669 75 aa9.43□□□□□ -0.9
CPSF7-204ENST00000413232 VPS25Q9BRG1 176 aa9.42□□□□□ -0.9
CPSF7-204ENST00000413232 C8orf87E5RJ46 101 aa9.39□□□□□ -0.91
CPSF7-204ENST00000413232 RBM3P98179 157 aaKnown RBP9.37□□□□□ -0.91
CPSF7-204ENST00000413232 ZCCHC13Q8WW36 166 aaKnown RBP9.37□□□□□ -0.91
CPSF7-204ENST00000413232 SPINK7P58062 85 aa9.36□□□□□ -0.91
CPSF7-204ENST00000413232 DSCR8Q96T75 97 aa9.34□□□□□ -0.91
CPSF7-204ENST00000413232 SCGB1C2P0DMR2 95 aa9.32□□□□□ -0.92
CPSF7-204ENST00000413232 Q6ZQT0 140 aa9.31□□□□□ -0.92
CPSF7-204ENST00000413232 BAALC-AS2P0C853 105 aa9.3□□□□□ -0.92
CPSF7-204ENST00000413232 Q8N9P0 234 aaPredicted RBP9.3□□□□□ -0.92
CPSF7-204ENST00000413232 UQCR10Q9UDW1 63 aa9.3□□□□□ -0.92
CPSF7-204ENST00000413232 MTURNQ8N3F0 131 aa9.29□□□□□ -0.92
CPSF7-204ENST00000413232 C9JAW5 83 aa9.28□□□□□ -0.92
CPSF7-204ENST00000413232 J3KT08 172 aa9.28□□□□□ -0.92
CPSF7-204ENST00000413232 C8orf17Q9NRJ1 99 aa9.23□□□□□ -0.93
CPSF7-204ENST00000413232 WFDC13Q8IUB5 93 aa9.22□□□□□ -0.93
CPSF7-204ENST00000413232 IGKV3D-7A0A0C4DH55 119 aa9.21□□□□□ -0.94
CPSF7-204ENST00000413232 NDUFB1O75438 58 aa9.21□□□□□ -0.94
CPSF7-204ENST00000413232 A8MWP4 228 aa9.2□□□□□ -0.94
CPSF7-204ENST00000413232 C21orf62-AS1Q17RA5 79 aa9.19□□□□□ -0.94
CPSF7-204ENST00000413232 KRTAP19-6Q3LI70 58 aa9.19□□□□□ -0.94
CPSF7-204ENST00000413232 NAA38Q9BRA0 125 aaKnown RBP9.19□□□□□ -0.94
CPSF7-204ENST00000413232 MACF1Q9UPN3 7388 aaKnown RBP9.17□□□□□ -0.94
CPSF7-204ENST00000413232 LYRM7Q5U5X0 104 aa9.16□□□□□ -0.94
CPSF7-204ENST00000413232 LOC110117498A0A087WWA1 95 aa9.15□□□□□ -0.94
CPSF7-204ENST00000413232 Q6ZVQ6 151 aa9.15□□□□□ -0.94
CPSF7-204ENST00000413232 TMA7Q9Y2S6 64 aaKnown RBP9.15□□□□□ -0.94
CPSF7-204ENST00000413232 JMJD7-PLA2G4BH0Y9G9 81 aa9.13□□□□□ -0.95
CPSF7-204ENST00000413232 C14orf132Q9NPU4 83 aa9.12□□□□□ -0.95
CPSF7-204ENST00000413232 SYNE2Q8WXH0 6885 aaKnown RBP9.12□□□□□ -0.95
CPSF7-204ENST00000413232 A0A1B0GW54 56 aa9.11□□□□□ -0.95
CPSF7-204ENST00000413232 ATXN8Q156A1 80 aa9.11□□□□□ -0.95
CPSF7-204ENST00000413232 PRR15Q8IV56 129 aa9.11□□□□□ -0.95
CPSF7-204ENST00000413232 MMP24-AS1A0A0U1RRL7 71 aa9.08□□□□□ -0.96
CPSF7-204ENST00000413232 PDE6GP18545 87 aa9.06□□□□□ -0.96
CPSF7-204ENST00000413232 MRPL34Q9BQ48 92 aaKnown RBP9.05□□□□□ -0.96
CPSF7-204ENST00000413232 LINC00846Q9NV44 126 aa9.05□□□□□ -0.96
CPSF7-204ENST00000413232 NREPQ16612 68 aa9.04□□□□□ -0.96
CPSF7-204ENST00000413232 TMEM254Q8TBM7 123 aa9.04□□□□□ -0.96
CPSF7-204ENST00000413232 H1FX-AS1Q4G0G2 97 aa9.03□□□□□ -0.96
CPSF7-204ENST00000413232 M0R143 59 aa9.01□□□□□ -0.97
CPSF7-204ENST00000413232 K7EQZ3 153 aa9□□□□□ -0.97
CPSF7-204ENST00000413232 hDV103S1A0JD37 113 aa8.98□□□□□ -0.97
CPSF7-204ENST00000413232 Q5W150 140 aa8.97□□□□□ -0.97
CPSF7-204ENST00000413232 NDUFS5O43920 106 aa8.96□□□□□ -0.98
CPSF7-204ENST00000413232 IGKV2D-30A0A075B6S6 120 aa8.93□□□□□ -0.98
CPSF7-204ENST00000413232 IGKV2-30P06310 120 aa8.93□□□□□ -0.98
CPSF7-204ENST00000413232 KRTAP6-3Q3LI67 103 aa8.88□□□□□ -0.99
CPSF7-204ENST00000413232 C7orf65Q6ZTY9 151 aa8.87□□□□□ -0.99
CPSF7-204ENST00000413232 BPY2O14599 106 aa8.85□□□□□ -0.99
CPSF7-204ENST00000413232 Q8N9L7 120 aa8.85□□□□□ -0.99
CPSF7-204ENST00000413232 BATFQ16520 125 aa8.84□□□□□ -0.99
CPSF7-204ENST00000413232 C4orf26Q17RF5 130 aa8.83□□□□□ -1
CPSF7-204ENST00000413232 H3BT86 120 aa8.82□□□□□ -1
CPSF7-204ENST00000413232 HCG22E2RYF7 251 aa8.8□□□□□ -1
CPSF7-204ENST00000413232 CASC2Q6XLA1 102 aa8.79□□□□□ -1
CPSF7-204ENST00000413232 C9orf118A6NHY6 69 aa8.78□□□□□ -1
CPSF7-204ENST00000413232 SMIM6P0DI80 62 aa8.78□□□□□ -1
CPSF7-204ENST00000413232 TAX1BP3O14907 124 aa8.77□□□□□ -1.01
CPSF7-204ENST00000413232 KRTAP3-1Q9BYR8 98 aa8.76□□□□□ -1.01
CPSF7-204ENST00000413232 A0A1W2PPM0 123 aa8.75□□□□□ -1.01
CPSF7-204ENST00000413232 C5orf47Q569G3 176 aa8.75□□□□□ -1.01
CPSF7-204ENST00000413232 MT1BP07438 61 aa8.72□□□□□ -1.01
CPSF7-204ENST00000413232 TSTD3H0UI37 97 aa8.71□□□□□ -1.02
CPSF7-204ENST00000413232 CXCL6P80162 114 aa8.69□□□□□ -1.02
CPSF7-204ENST00000413232 SMCPP49901 116 aaPredicted RBP8.68□□□□□ -1.02
CPSF7-204ENST00000413232 FAM236AA0A1B0GUQ0 79 aa8.66□□□□□ -1.02
CPSF7-204ENST00000413232 FAM236BA0A1B0GV22 79 aa8.66□□□□□ -1.02
CPSF7-204ENST00000413232 A6NN06 94 aa8.64□□□□□ -1.03
CPSF7-204ENST00000413232 KRTAP19-8Q3LI54 63 aa8.63□□□□□ -1.03
CPSF7-204ENST00000413232 S4R3F8 94 aa8.63□□□□□ -1.03
CPSF7-204ENST00000413232 LCA10Q71F78 164 aa8.62□□□□□ -1.03
CPSF7-204ENST00000413232 SPRR2GQ9BYE4 73 aa8.62□□□□□ -1.03
CPSF7-204ENST00000413232 C1orf64Q8NEQ6 169 aa8.61□□□□□ -1.03
CPSF7-204ENST00000413232 Q5VV11 94 aa8.6□□□□□ -1.03
CPSF7-204ENST00000413232 SPCS1Q9Y6A9 102 aa8.6□□□□□ -1.03
CPSF7-204ENST00000413232 CSAG1Q6PB30 78 aa8.58□□□□□ -1.04
CPSF7-204ENST00000413232 NEBP20929 6669 aa8.56□□□□□ -1.04
CPSF7-204ENST00000413232 PRO0461Q9UI25 63 aa8.55□□□□□ -1.04
CPSF7-204ENST00000413232 MUC12Q9UKN1 5478 aa8.54□□□□□ -1.04
CPSF7-204ENST00000413232 UBL5Q9BZL1 73 aa8.54□□□□□ -1.04
CPSF7-204ENST00000413232 KRTAP10-5P60370 271 aa8.53□□□□□ -1.04
CPSF7-204ENST00000413232 LOC105371267A0A1B0GV96 52 aa8.52□□□□□ -1.05
CPSF7-204ENST00000413232 KRTAP3-3Q9BYR6 98 aa8.52□□□□□ -1.05
CPSF7-204ENST00000413232 KLKP1Q107X0 134 aa8.49□□□□□ -1.05
CPSF7-204ENST00000413232 A0A087WVE0 104 aa8.45□□□□□ -1.06
CPSF7-204ENST00000413232 TP53AIP1Q9HCN2 124 aa8.44□□□□□ -1.06
CPSF7-204ENST00000413232 K7EP34 96 aa8.4□□□□□ -1.06
CPSF7-204ENST00000413232 CYP4F30PQ9H0H9 118 aa8.4□□□□□ -1.06
CPSF7-204ENST00000413232 KRTAP5-9P26371 169 aa8.39□□□□□ -1.07
CPSF7-204ENST00000413232 COL5A1-AS1Q5SY13 56 aa8.36□□□□□ -1.07
CPSF7-204ENST00000413232 KRTAP20-1Q3LI63 56 aa8.33□□□□□ -1.08
CPSF7-204ENST00000413232 KMT2DO14686 5537 aa8.32□□□□□ -1.08
CPSF7-204ENST00000413232 CRIPTQ9P021 101 aa8.29□□□□□ -1.08
CPSF7-204ENST00000413232 ETDBQ3ZM63 59 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms