RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 A0A1B0GX51 115 aa1.03□□□□□ -2.24
RNU4-53P-201ENST00000410828 H3BQ85 93 aa1.03□□□□□ -2.24
RNU4-53P-201ENST00000410828 KRTDAPP60985 99 aa1.03□□□□□ -2.24
RNU4-53P-201ENST00000410828 SNRPEP62304 92 aaKnown RBP1.03□□□□□ -2.24
RNU4-53P-201ENST00000410828 C5orf47Q569G3 176 aa1.03□□□□□ -2.24
RNU4-53P-201ENST00000410828 CSAG1Q6PB30 78 aa1.03□□□□□ -2.24
RNU4-53P-201ENST00000410828 KRTAP8-1Q8IUC2 63 aa1.03□□□□□ -2.24
RNU4-53P-201ENST00000410828 A0A1B0GV72 72 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 HIST1H2BKO60814 126 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 DNAL4O96015 105 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 HIST1H2BJP06899 126 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 HIST1H2BOP23527 126 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 HIST1H2BBP33778 126 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 SMCPP49901 116 aaPredicted RBP1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 HIST1H2BDP58876 126 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 HIST1H2BCP62807 126 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 KLKP1Q107X0 134 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 HIST2H2BEQ16778 126 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 C21orf62-AS1Q17RA5 79 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 LCE3BQ5TA77 95 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 C2orf91Q6ZV80 131 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 Q6ZVQ6 151 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 ATOH7Q8N100 152 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 HIST1H2BHQ93079 126 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 HIST1H4GQ99525 98 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 HIST1H2BNQ99877 126 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 HIST1H2BMQ99879 126 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 VPS25Q9BRG1 176 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 C8orf17Q9NRJ1 99 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 PRO2289Q9P1D8 64 aa1.02□□□□□ -2.25
RNU4-53P-201ENST00000410828 IGKV2D-30A0A075B6S6 120 aa1.01□□□□□ -2.25
RNU4-53P-201ENST00000410828 HSBP1L1C9JCN9 74 aa1.01□□□□□ -2.25
RNU4-53P-201ENST00000410828 TMEM256-PLSCR3K7ERE1 68 aa1.01□□□□□ -2.25
RNU4-53P-201ENST00000410828 IGKV2-30P06310 120 aa1.01□□□□□ -2.25
RNU4-53P-201ENST00000410828 C7orf65Q6ZTY9 151 aa1.01□□□□□ -2.25
RNU4-53P-201ENST00000410828 PRR15Q8IV56 129 aa1.01□□□□□ -2.25
RNU4-53P-201ENST00000410828 CRIPTQ9P021 101 aa1.01□□□□□ -2.25
RNU4-53P-201ENST00000410828 ORMDL1Q9P0S3 153 aa1.01□□□□□ -2.25
RNU4-53P-201ENST00000410828 A0A0B4J2C4 111 aa1□□□□□ -2.25
RNU4-53P-201ENST00000410828 NDUFS5O43920 106 aa1□□□□□ -2.25
RNU4-53P-201ENST00000410828 RBM3P98179 157 aaKnown RBP1□□□□□ -2.25
RNU4-53P-201ENST00000410828 UBE2V1Q13404 147 aa1□□□□□ -2.25
RNU4-53P-201ENST00000410828 C4orf26Q17RF5 130 aa1□□□□□ -2.25
RNU4-53P-201ENST00000410828 Q6ZQT0 140 aa1□□□□□ -2.25
RNU4-53P-201ENST00000410828 LCA10Q71F78 164 aa1□□□□□ -2.25
RNU4-53P-201ENST00000410828 MRPL34Q9BQ48 92 aaKnown RBP1□□□□□ -2.25
RNU4-53P-201ENST00000410828 S4R3F8 94 aa1□□□□□ -2.25
RNU4-53P-201ENST00000410828 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
RNU4-53P-201ENST00000410828 TMEM238LA0A1B0GVL6 79 aa0.99□□□□□ -2.25
RNU4-53P-201ENST00000410828 A6NJY4 79 aa0.99□□□□□ -2.25
RNU4-53P-201ENST00000410828 C9JAW5 83 aa0.99□□□□□ -2.25
RNU4-53P-201ENST00000410828 TRIAP1O43715 76 aa0.99□□□□□ -2.25
RNU4-53P-201ENST00000410828 KRTAP12-2P59991 146 aa0.99□□□□□ -2.25
RNU4-53P-201ENST00000410828 COA6Q5JTJ3 125 aaKnown RBP0.99□□□□□ -2.25
RNU4-53P-201ENST00000410828 TMEM254Q8TBM7 123 aa0.99□□□□□ -2.25
RNU4-53P-201ENST00000410828 PRO1854Q9UHT4 67 aa0.99□□□□□ -2.25
RNU4-53P-201ENST00000410828 KRTAP4-8A0A0G2JLE6 195 aa0.98□□□□□ -2.25
RNU4-53P-201ENST00000410828 MMP24-AS1A0A0U1RRL7 71 aa0.98□□□□□ -2.25
RNU4-53P-201ENST00000410828 A0A1B0GW54 56 aa0.98□□□□□ -2.25
RNU4-53P-201ENST00000410828 hDV103S1A0JD37 113 aa0.98□□□□□ -2.25
RNU4-53P-201ENST00000410828 K7EQZ3 153 aa0.98□□□□□ -2.25
RNU4-53P-201ENST00000410828 COX6CP09669 75 aa0.98□□□□□ -2.25
RNU4-53P-201ENST00000410828 COX8AP10176 69 aa0.98□□□□□ -2.25
RNU4-53P-201ENST00000410828 PSMB2P49721 201 aa0.98□□□□□ -2.25
RNU4-53P-201ENST00000410828 MT1XP80297 61 aa0.98□□□□□ -2.25
RNU4-53P-201ENST00000410828 Q5W150 140 aa0.98□□□□□ -2.25
RNU4-53P-201ENST00000410828 HIST3H2BBQ8N257 126 aa0.98□□□□□ -2.25
RNU4-53P-201ENST00000410828 PLAC4Q8WY50 150 aa0.98□□□□□ -2.25
RNU4-53P-201ENST00000410828 KRTAP4-9Q9BYQ8 210 aa0.98□□□□□ -2.25
RNU4-53P-201ENST00000410828 KRTAP4-8Q9BYQ9 185 aa0.98□□□□□ -2.25
RNU4-53P-201ENST00000410828 DLEU1O43261 78 aa0.97□□□□□ -2.25
RNU4-53P-201ENST00000410828 C1orf64Q8NEQ6 169 aa0.97□□□□□ -2.25
RNU4-53P-201ENST00000410828 KRTAP3-1Q9BYR8 98 aa0.97□□□□□ -2.25
RNU4-53P-201ENST00000410828 HIGD1BQ9P298 99 aa0.97□□□□□ -2.25
RNU4-53P-201ENST00000410828 HMCN1Q96RW7 5635 aa0.96□□□□□ -2.26
RNU4-53P-201ENST00000410828 A8MUN3 132 aa0.96□□□□□ -2.26
RNU4-53P-201ENST00000410828 JMJD7-PLA2G4BH0Y9G9 81 aa0.96□□□□□ -2.26
RNU4-53P-201ENST00000410828 PDE6GP18545 87 aa0.96□□□□□ -2.26
RNU4-53P-201ENST00000410828 S100A2P29034 98 aa0.96□□□□□ -2.26
RNU4-53P-201ENST00000410828 NREPQ16612 68 aa0.96□□□□□ -2.26
RNU4-53P-201ENST00000410828 CEND1Q8N111 149 aa0.96□□□□□ -2.26
RNU4-53P-201ENST00000410828 C14orf144Q96I85 54 aa0.96□□□□□ -2.26
RNU4-53P-201ENST00000410828 HIST1H2BLQ99880 126 aa0.96□□□□□ -2.26
RNU4-53P-201ENST00000410828 PAM16Q9Y3D7 125 aa0.96□□□□□ -2.26
RNU4-53P-201ENST00000410828 LOC110117498A0A087WWA1 95 aa0.95□□□□□ -2.26
RNU4-53P-201ENST00000410828 HCG22E2RYF7 251 aa0.95□□□□□ -2.26
RNU4-53P-201ENST00000410828 BAALC-AS2P0C853 105 aa0.95□□□□□ -2.26
RNU4-53P-201ENST00000410828 SCGB1C2P0DMR2 95 aa0.95□□□□□ -2.26
RNU4-53P-201ENST00000410828 FXYD2P54710 66 aa0.95□□□□□ -2.26
RNU4-53P-201ENST00000410828 CXCL6P80162 114 aa0.95□□□□□ -2.26
RNU4-53P-201ENST00000410828 KRTAP3-3Q9BYR6 98 aa0.95□□□□□ -2.26
RNU4-53P-201ENST00000410828 H0YAA0 97 aa0.94□□□□□ -2.26
RNU4-53P-201ENST00000410828 K7ERJ3 54 aa0.94□□□□□ -2.26
RNU4-53P-201ENST00000410828 BPY2O14599 106 aa0.94□□□□□ -2.26
RNU4-53P-201ENST00000410828 KRTAP10-7P60409 375 aaPredicted RBP0.94□□□□□ -2.26
RNU4-53P-201ENST00000410828 LCE1DQ5T752 114 aa0.94□□□□□ -2.26
RNU4-53P-201ENST00000410828 CASC2Q6XLA1 102 aa0.94□□□□□ -2.26
RNU4-53P-201ENST00000410828 NDUFC1O43677 76 aa0.93□□□□□ -2.26
RNU4-53P-201ENST00000410828 KRTAP10-12P60413 245 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms