RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 NOTCH2NLQ7Z3S9 236 aa11.88□□□□□ -0.51
PTCD3-203ENST00000409783 C20orf166-AS1Q96NR2 134 aa11.88□□□□□ -0.51
PTCD3-203ENST00000409783 A8MUU9 505 aa11.86□□□□□ -0.51
PTCD3-203ENST00000409783 KRTAP16-1A8MUX0 517 aa11.86□□□□□ -0.51
PTCD3-203ENST00000409783 LINC00313P59037 77 aa11.86□□□□□ -0.51
PTCD3-203ENST00000409783 J3KT08 172 aa11.85□□□□□ -0.51
PTCD3-203ENST00000409783 A0A1B0GVX0 72 aa11.83□□□□□ -0.52
PTCD3-203ENST00000409783 IGHV6-1A0A0B4J1U7 121 aa11.82□□□□□ -0.52
PTCD3-203ENST00000409783 GTF2H5Q6ZYL4 71 aa11.82□□□□□ -0.52
PTCD3-203ENST00000409783 NREPQ16612 68 aa11.78□□□□□ -0.52
PTCD3-203ENST00000409783 C8orf87E5RJ46 101 aa11.77□□□□□ -0.53
PTCD3-203ENST00000409783 ATP11AUNQ6ZP68 121 aa11.77□□□□□ -0.53
PTCD3-203ENST00000409783 LCE2AQ5TA79 106 aaPredicted RBP11.75□□□□□ -0.53
PTCD3-203ENST00000409783 A8MWP4 228 aa11.74□□□□□ -0.53
PTCD3-203ENST00000409783 KRTAP19-2Q3LHN2 52 aa11.74□□□□□ -0.53
PTCD3-203ENST00000409783 F8W1H4 67 aa11.73□□□□□ -0.53
PTCD3-203ENST00000409783 IGKV3D-7A0A0C4DH55 119 aa11.72□□□□□ -0.53
PTCD3-203ENST00000409783 NDUFB1O75438 58 aa11.71□□□□□ -0.53
PTCD3-203ENST00000409783 LCE2CQ5TA81 110 aa11.69□□□□□ -0.54
PTCD3-203ENST00000409783 C8orf17Q9NRJ1 99 aa11.67□□□□□ -0.54
PTCD3-203ENST00000409783 ETDBQ3ZM63 59 aa11.66□□□□□ -0.54
PTCD3-203ENST00000409783 Q6ZVQ6 151 aa11.66□□□□□ -0.54
PTCD3-203ENST00000409783 PRR15Q8IV56 129 aa11.66□□□□□ -0.54
PTCD3-203ENST00000409783 LINC00846Q9NV44 126 aa11.62□□□□□ -0.55
PTCD3-203ENST00000409783 K7EQZ3 153 aa11.6□□□□□ -0.55
PTCD3-203ENST00000409783 BPY2O14599 106 aa11.6□□□□□ -0.55
PTCD3-203ENST00000409783 Q8N9P0 234 aaPredicted RBP11.59□□□□□ -0.55
PTCD3-203ENST00000409783 MMP24-AS1A0A0U1RRL7 71 aa11.57□□□□□ -0.56
PTCD3-203ENST00000409783 UBL5Q9BZL1 73 aa11.53□□□□□ -0.56
PTCD3-203ENST00000409783 A0A1B0GV90 55 aa11.5□□□□□ -0.57
PTCD3-203ENST00000409783 Q8N9L7 120 aa11.5□□□□□ -0.57
PTCD3-203ENST00000409783 TMEM254Q8TBM7 123 aa11.5□□□□□ -0.57
PTCD3-203ENST00000409783 ZCCHC13Q8WW36 166 aaKnown RBP11.5□□□□□ -0.57
PTCD3-203ENST00000409783 MT1HP80294 61 aa11.48□□□□□ -0.57
PTCD3-203ENST00000409783 MRPL34Q9BQ48 92 aaKnown RBP11.48□□□□□ -0.57
PTCD3-203ENST00000409783 hDV103S1A0JD37 113 aa11.46□□□□□ -0.57
PTCD3-203ENST00000409783 COX6B2Q6YFQ2 88 aa11.42□□□□□ -0.58
PTCD3-203ENST00000409783 FLGP20930 4061 aaPredicted RBP11.4□□□□□ -0.58
PTCD3-203ENST00000409783 HRES1P13985 223 aa11.39□□□□□ -0.59
PTCD3-203ENST00000409783 WFDC13Q8IUB5 93 aa11.38□□□□□ -0.59
PTCD3-203ENST00000409783 MPLKIPQ8TAP9 179 aa11.37□□□□□ -0.59
PTCD3-203ENST00000409783 CASC2Q6XLA1 102 aa11.36□□□□□ -0.59
PTCD3-203ENST00000409783 FAM240AA0A1B0GVK7 77 aa11.34□□□□□ -0.59
PTCD3-203ENST00000409783 ACYP1P07311 99 aa11.34□□□□□ -0.59
PTCD3-203ENST00000409783 CXCL6P80162 114 aa11.34□□□□□ -0.59
PTCD3-203ENST00000409783 SPINK7P58062 85 aa11.33□□□□□ -0.6
PTCD3-203ENST00000409783 NDUFS5O43920 106 aa11.31□□□□□ -0.6
PTCD3-203ENST00000409783 HCG22E2RYF7 251 aa11.3□□□□□ -0.6
PTCD3-203ENST00000409783 Q5W150 140 aa11.26□□□□□ -0.61
PTCD3-203ENST00000409783 RBM12B-AS1Q9P1G2 102 aa11.22□□□□□ -0.61
PTCD3-203ENST00000409783 KRTAP10-6P60371 365 aaPredicted RBP11.2□□□□□ -0.62
PTCD3-203ENST00000409783 M0R2T5 61 aa11.19□□□□□ -0.62
PTCD3-203ENST00000409783 LORP23490 312 aaPredicted RBP11.19□□□□□ -0.62
PTCD3-203ENST00000409783 FAM236DA0A1B0GTK5 79 aa11.18□□□□□ -0.62
PTCD3-203ENST00000409783 FAM236CP0DP71 79 aa11.18□□□□□ -0.62
PTCD3-203ENST00000409783 ATP5EP2Q5VTU8 51 aa11.16□□□□□ -0.62
PTCD3-203ENST00000409783 LINC00643Q86TS7 51 aa11.1□□□□□ -0.63
PTCD3-203ENST00000409783 IGKV2D-30A0A075B6S6 120 aa11.09□□□□□ -0.63
PTCD3-203ENST00000409783 IGKV2-30P06310 120 aa11.09□□□□□ -0.63
PTCD3-203ENST00000409783 C7orf65Q6ZTY9 151 aa11.08□□□□□ -0.64
PTCD3-203ENST00000409783 KRTAP9-2Q9BYQ4 174 aa11.08□□□□□ -0.64
PTCD3-203ENST00000409783 TP53AIP1Q9HCN2 124 aa11.06□□□□□ -0.64
PTCD3-203ENST00000409783 HIST1H4AP62805 103 aaKnown RBP11.03□□□□□ -0.64
PTCD3-203ENST00000409783 J3QR89 54 aa11.01□□□□□ -0.65
PTCD3-203ENST00000409783 LCE2DQ5TA82 110 aaPredicted RBP10.98□□□□□ -0.65
PTCD3-203ENST00000409783 A0A087WVE0 104 aa10.97□□□□□ -0.65
PTCD3-203ENST00000409783 KRTAP9-8Q9BYQ0 159 aa10.94□□□□□ -0.66
PTCD3-203ENST00000409783 C4orf26Q17RF5 130 aa10.89□□□□□ -0.67
PTCD3-203ENST00000409783 H1FX-AS1Q4G0G2 97 aa10.88□□□□□ -0.67
PTCD3-203ENST00000409783 TRAV22A0A0B4J277 110 aa10.86□□□□□ -0.67
PTCD3-203ENST00000409783 UQCRQO14949 82 aa10.83□□□□□ -0.68
PTCD3-203ENST00000409783 MT2AP02795 61 aa10.81□□□□□ -0.68
PTCD3-203ENST00000409783 KRTAP3-1Q9BYR8 98 aa10.81□□□□□ -0.68
PTCD3-203ENST00000409783 CYP4F30PQ9H0H9 118 aa10.81□□□□□ -0.68
PTCD3-203ENST00000409783 LOC101927531A0A1B0GV80 90 aa10.77□□□□□ -0.69
PTCD3-203ENST00000409783 K7ERU9 68 aa10.77□□□□□ -0.69
PTCD3-203ENST00000409783 OCR1Q9BZK8 76 aa10.76□□□□□ -0.69
PTCD3-203ENST00000409783 H0Y9P7 68 aa10.75□□□□□ -0.69
PTCD3-203ENST00000409783 MT1FP04733 61 aa10.73□□□□□ -0.69
PTCD3-203ENST00000409783 C1orf64Q8NEQ6 169 aa10.72□□□□□ -0.69
PTCD3-203ENST00000409783 ATOX1O00244 68 aa10.71□□□□□ -0.69
PTCD3-203ENST00000409783 MT-ATP8P03928 68 aa10.68□□□□□ -0.7
PTCD3-203ENST00000409783 IMUPQ9GZP8 106 aa10.66□□□□□ -0.7
PTCD3-203ENST00000409783 KRTAP10-10P60014 251 aa10.62□□□□□ -0.71
PTCD3-203ENST00000409783 LINC00208Q96KT6 92 aa10.61□□□□□ -0.71
PTCD3-203ENST00000409783 KRTAP9-3Q9BYQ3 159 aa10.59□□□□□ -0.71
PTCD3-203ENST00000409783 C5orf47Q569G3 176 aa10.58□□□□□ -0.72
PTCD3-203ENST00000409783 KRTAP9-6A0A140TA67 174 aa10.57□□□□□ -0.72
PTCD3-203ENST00000409783 SCGB1A1P11684 91 aa10.57□□□□□ -0.72
PTCD3-203ENST00000409783 MP68P56378 58 aa10.57□□□□□ -0.72
PTCD3-203ENST00000409783 S4R3F8 94 aa10.57□□□□□ -0.72
PTCD3-203ENST00000409783 KLKP1Q107X0 134 aa10.55□□□□□ -0.72
PTCD3-203ENST00000409783 LCA10Q71F78 164 aa10.54□□□□□ -0.72
PTCD3-203ENST00000409783 CRCT1Q9UGL9 99 aa10.52□□□□□ -0.73
PTCD3-203ENST00000409783 H3BPC8 53 aa10.5□□□□□ -0.73
PTCD3-203ENST00000409783 FSIP2Q5CZC0 6907 aa10.49□□□□□ -0.73
PTCD3-203ENST00000409783 KRTAP3-3Q9BYR6 98 aa10.48□□□□□ -0.73
PTCD3-203ENST00000409783 FAM236AA0A1B0GUQ0 79 aa10.47□□□□□ -0.73
PTCD3-203ENST00000409783 FAM236BA0A1B0GV22 79 aa10.47□□□□□ -0.73
PTCD3-203ENST00000409783 LCE2BO14633 110 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms