RNA–Protein interactions for RNA: ENST00000403444.7

CEACAM1-207, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-207ENST00000403444 LINC01558Q9Y6Z2 57 aa4.11□□□□□ -1.75
CEACAM1-207ENST00000403444 PKHD1P08F94 4074 aa4.11□□□□□ -1.75
CEACAM1-207ENST00000403444 H3BQ85 93 aa4.11□□□□□ -1.75
CEACAM1-207ENST00000403444 IGLV1-50A0A075B6I6 118 aa4.1□□□□□ -1.75
CEACAM1-207ENST00000403444 Q6ZR54 194 aa4.1□□□□□ -1.75
CEACAM1-207ENST00000403444 KMT2CQ8NEZ4 4911 aaKnown RBP4.1□□□□□ -1.75
CEACAM1-207ENST00000403444 RYR3Q15413 4870 aa4.1□□□□□ -1.75
CEACAM1-207ENST00000403444 SPANXA2-OT1Q8N9U9 137 aa4.1□□□□□ -1.75
CEACAM1-207ENST00000403444 KCNQ1DNQ9H478 68 aa4.09□□□□□ -1.75
CEACAM1-207ENST00000403444 Q8NBF4 154 aa4.09□□□□□ -1.75
CEACAM1-207ENST00000403444 FAM229AH3BQW9 127 aa4.09□□□□□ -1.76
CEACAM1-207ENST00000403444 IGFL1Q6UW32 110 aa4.09□□□□□ -1.76
CEACAM1-207ENST00000403444 LCE2AQ5TA79 106 aaPredicted RBP4.08□□□□□ -1.76
CEACAM1-207ENST00000403444 KRTAP7-1Q8IUC3 87 aa4.08□□□□□ -1.76
CEACAM1-207ENST00000403444 ROMO1P60602 79 aa4.08□□□□□ -1.76
CEACAM1-207ENST00000403444 KRTAP11-1Q8IUC1 163 aa4.07□□□□□ -1.76
CEACAM1-207ENST00000403444 RTL8CO15255 209 aa4.07□□□□□ -1.76
CEACAM1-207ENST00000403444 ASB16-AS1Q495Z4 193 aa4.07□□□□□ -1.76
CEACAM1-207ENST00000403444 H0Y9P7 68 aa4.06□□□□□ -1.76
CEACAM1-207ENST00000403444 PANO1I0J062 215 aa4.06□□□□□ -1.76
CEACAM1-207ENST00000403444 DYNC1H1Q14204 4646 aaKnown RBP4.06□□□□□ -1.76
CEACAM1-207ENST00000403444 DSCR10P59022 87 aa4.06□□□□□ -1.76
CEACAM1-207ENST00000403444 CDK2AP2O75956 126 aa4.05□□□□□ -1.76
CEACAM1-207ENST00000403444 MIR22HGQ0VDD5 57 aa4.05□□□□□ -1.76
CEACAM1-207ENST00000403444 DMBT1Q9UGM3 2413 aaPredicted RBP4.05□□□□□ -1.76
CEACAM1-207ENST00000403444 CNBPP62633 177 aaKnown RBP4.04□□□□□ -1.76
CEACAM1-207ENST00000403444 PLAC8Q9NZF1 115 aa4.04□□□□□ -1.76
CEACAM1-207ENST00000403444 APLNQ9ULZ1 77 aa4.04□□□□□ -1.76
CEACAM1-207ENST00000403444 LY6G6CO95867 125 aa4.04□□□□□ -1.76
CEACAM1-207ENST00000403444 CIRBP-AS1Q8TBR5 109 aa4.04□□□□□ -1.76
CEACAM1-207ENST00000403444 LORP23490 312 aaPredicted RBP4.03□□□□□ -1.76
CEACAM1-207ENST00000403444 VPS13BQ7Z7G8 4022 aa4.03□□□□□ -1.76
CEACAM1-207ENST00000403444 IGLV5-48A0A075B6I7 105 aa4.02□□□□□ -1.77
CEACAM1-207ENST00000403444 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.02□□□□□ -1.77
CEACAM1-207ENST00000403444 IGLV7-46A0A075B6I9 117 aa4□□□□□ -1.77
CEACAM1-207ENST00000403444 APOBP04114 4563 aaKnown RBP4□□□□□ -1.77
CEACAM1-207ENST00000403444 H3BPC8 53 aa3.99□□□□□ -1.77
CEACAM1-207ENST00000403444 C9orf163Q8N9P6 203 aa3.99□□□□□ -1.77
CEACAM1-207ENST00000403444 KRTAP4-16G5E9R7 235 aaPredicted RBP3.99□□□□□ -1.77
CEACAM1-207ENST00000403444 A0A087X002 238 aa3.98□□□□□ -1.77
CEACAM1-207ENST00000403444 Q6ZRN7 208 aaPredicted RBP3.98□□□□□ -1.77
CEACAM1-207ENST00000403444 NBDYA0A0U1RRE5 68 aa3.98□□□□□ -1.77
CEACAM1-207ENST00000403444 KRTAP16-1A8MUX0 517 aa3.98□□□□□ -1.77
CEACAM1-207ENST00000403444 P0C880 135 aa3.97□□□□□ -1.77
CEACAM1-207ENST00000403444 TLX1NBP0CAT3 122 aa3.97□□□□□ -1.77
CEACAM1-207ENST00000403444 SPRR1AP35321 89 aa3.96□□□□□ -1.77
CEACAM1-207ENST00000403444 NUPR2A6NF83 97 aa3.96□□□□□ -1.78
CEACAM1-207ENST00000403444 HRES1P13985 223 aa3.96□□□□□ -1.78
CEACAM1-207ENST00000403444 C14orf177Q52M58 125 aa3.96□□□□□ -1.78
CEACAM1-207ENST00000403444 IGLV5-52A0A0A0MRZ9 124 aa3.95□□□□□ -1.78
CEACAM1-207ENST00000403444 FAT3Q8TDW7 4589 aa3.95□□□□□ -1.78
CEACAM1-207ENST00000403444 FLG2Q5D862 2391 aaPredicted RBP3.95□□□□□ -1.78
CEACAM1-207ENST00000403444 SPRR4Q96PI1 79 aa3.95□□□□□ -1.78
CEACAM1-207ENST00000403444 PSORS1C2Q9UIG4 136 aa3.95□□□□□ -1.78
CEACAM1-207ENST00000403444 LRP1BQ9NZR2 4599 aa3.94□□□□□ -1.78
CEACAM1-207ENST00000403444 NOTCH2NLQ7Z3S9 236 aa3.94□□□□□ -1.78
CEACAM1-207ENST00000403444 SPATA8Q6RVD6 105 aa3.93□□□□□ -1.78
CEACAM1-207ENST00000403444 A0A1B0GW54 56 aa3.93□□□□□ -1.78
CEACAM1-207ENST00000403444 WWC2-AS2Q96NR7 200 aa3.93□□□□□ -1.78
CEACAM1-207ENST00000403444 A8MWP4 228 aa3.93□□□□□ -1.78
CEACAM1-207ENST00000403444 A0A1B0GU69 56 aa3.92□□□□□ -1.78
CEACAM1-207ENST00000403444 SPINK1P00995 79 aa3.92□□□□□ -1.78
CEACAM1-207ENST00000403444 KRTAP25-1Q3LHN0 102 aa3.92□□□□□ -1.78
CEACAM1-207ENST00000403444 PLA2G2DQ9UNK4 145 aa3.92□□□□□ -1.78
CEACAM1-207ENST00000403444 IGLV8-61A0A075B6I0 122 aa3.92□□□□□ -1.78
CEACAM1-207ENST00000403444 IGLV5-37A0A075B6J1 123 aa3.91□□□□□ -1.78
CEACAM1-207ENST00000403444 NDUFAF8A1L188 74 aa3.91□□□□□ -1.78
CEACAM1-207ENST00000403444 SPACA4Q8TDM5 124 aa3.91□□□□□ -1.78
CEACAM1-207ENST00000403444 A0A087WTM6 91 aa3.91□□□□□ -1.78
CEACAM1-207ENST00000403444 UQCR11O14957 56 aa3.91□□□□□ -1.78
CEACAM1-207ENST00000403444 HSPG2P98160 4391 aa3.9□□□□□ -1.78
CEACAM1-207ENST00000403444 ZNF861PO60384 105 aa3.9□□□□□ -1.78
CEACAM1-207ENST00000403444 EPPK1P58107 5090 aaKnown RBP3.9□□□□□ -1.79
CEACAM1-207ENST00000403444 IGKV2D-30A0A075B6S6 120 aa3.9□□□□□ -1.79
CEACAM1-207ENST00000403444 IGKV2-30P06310 120 aa3.9□□□□□ -1.79
CEACAM1-207ENST00000403444 KRTAP29-1A8MX34 341 aaPredicted RBP3.89□□□□□ -1.79
CEACAM1-207ENST00000403444 LINC00483Q53H64 154 aa3.89□□□□□ -1.79
CEACAM1-207ENST00000403444 C8orf17Q9NRJ1 99 aa3.88□□□□□ -1.79
CEACAM1-207ENST00000403444 MMP24-AS1A0A0U1RRL7 71 aa3.88□□□□□ -1.79
CEACAM1-207ENST00000403444 SMR3BP02814 79 aaPredicted RBP3.88□□□□□ -1.79
CEACAM1-207ENST00000403444 LINC00472Q9H8W2 130 aa3.88□□□□□ -1.79
CEACAM1-207ENST00000403444 A0A1B0GVY2 172 aa3.87□□□□□ -1.79
CEACAM1-207ENST00000403444 A8MUU9 505 aa3.87□□□□□ -1.79
CEACAM1-207ENST00000403444 C20orf166-AS1Q96NR2 134 aa3.86□□□□□ -1.79
CEACAM1-207ENST00000403444 CRIPTQ9P021 101 aa3.86□□□□□ -1.79
CEACAM1-207ENST00000403444 SPINT4Q6UDR6 99 aa3.85□□□□□ -1.79
CEACAM1-207ENST00000403444 A0A1B0GVX0 72 aa3.85□□□□□ -1.79
CEACAM1-207ENST00000403444 KRTAP10-2P60368 255 aa3.85□□□□□ -1.79
CEACAM1-207ENST00000403444 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
CEACAM1-207ENST00000403444 MRPL34Q9BQ48 92 aaKnown RBP3.84□□□□□ -1.79
CEACAM1-207ENST00000403444 RYR1P21817 5038 aa3.84□□□□□ -1.8
CEACAM1-207ENST00000403444 TNXBP22105 4242 aa3.83□□□□□ -1.8
CEACAM1-207ENST00000403444 Q5W150 140 aa3.82□□□□□ -1.8
CEACAM1-207ENST00000403444 Q6ZSA8 131 aa3.82□□□□□ -1.8
CEACAM1-207ENST00000403444 ACYP2P14621 99 aa3.81□□□□□ -1.8
CEACAM1-207ENST00000403444 C9orf92A6NGG3 77 aa3.8□□□□□ -1.8
CEACAM1-207ENST00000403444 IGLV7-43P04211 117 aa3.8□□□□□ -1.8
CEACAM1-207ENST00000403444 SSBP3-AS1Q7Z2R9 100 aa3.8□□□□□ -1.8
CEACAM1-207ENST00000403444 Q8N1X5 172 aa3.8□□□□□ -1.8
CEACAM1-207ENST00000403444 Q96NJ1 140 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms