RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 J3KT08 172 aa9.06□□□□□ -0.96
UPK3A-202ENST00000396082 PDE6GP18545 87 aa9.06□□□□□ -0.96
UPK3A-202ENST00000396082 C8orf87E5RJ46 101 aa9.05□□□□□ -0.96
UPK3A-202ENST00000396082 C14orf132Q9NPU4 83 aa9.05□□□□□ -0.96
UPK3A-202ENST00000396082 C9orf118A6NHY6 69 aa9.03□□□□□ -0.96
UPK3A-202ENST00000396082 A0A1B0GW54 56 aa9.02□□□□□ -0.97
UPK3A-202ENST00000396082 NDUFB1O75438 58 aa9.01□□□□□ -0.97
UPK3A-202ENST00000396082 A0A1W2PPM0 123 aa8.99□□□□□ -0.97
UPK3A-202ENST00000396082 TAX1BP3O14907 124 aa8.99□□□□□ -0.97
UPK3A-202ENST00000396082 KRTAP10-6P60371 365 aaPredicted RBP8.97□□□□□ -0.97
UPK3A-202ENST00000396082 H3BT86 120 aa8.96□□□□□ -0.98
UPK3A-202ENST00000396082 MTURNQ8N3F0 131 aa8.96□□□□□ -0.98
UPK3A-202ENST00000396082 LORP23490 312 aaPredicted RBP8.95□□□□□ -0.98
UPK3A-202ENST00000396082 LCE2DQ5TA82 110 aaPredicted RBP8.95□□□□□ -0.98
UPK3A-202ENST00000396082 A8MWP4 228 aa8.94□□□□□ -0.98
UPK3A-202ENST00000396082 NREPQ16612 68 aa8.93□□□□□ -0.98
UPK3A-202ENST00000396082 FAM236DA0A1B0GTK5 79 aa8.92□□□□□ -0.98
UPK3A-202ENST00000396082 FAM236CP0DP71 79 aa8.92□□□□□ -0.98
UPK3A-202ENST00000396082 FLGP20930 4061 aaPredicted RBP8.91□□□□□ -0.98
UPK3A-202ENST00000396082 C8orf17Q9NRJ1 99 aa8.91□□□□□ -0.98
UPK3A-202ENST00000396082 IGKV3D-7A0A0C4DH55 119 aa8.89□□□□□ -0.99
UPK3A-202ENST00000396082 ZCCHC13Q8WW36 166 aaKnown RBP8.89□□□□□ -0.99
UPK3A-202ENST00000396082 SPCS1Q9Y6A9 102 aa8.89□□□□□ -0.99
UPK3A-202ENST00000396082 KRTAP9-6A0A140TA67 174 aa8.88□□□□□ -0.99
UPK3A-202ENST00000396082 RBM12B-AS1Q9P1G2 102 aa8.88□□□□□ -0.99
UPK3A-202ENST00000396082 PRR15Q8IV56 129 aa8.85□□□□□ -0.99
UPK3A-202ENST00000396082 Q8N9P0 234 aaPredicted RBP8.85□□□□□ -0.99
UPK3A-202ENST00000396082 HRES1P13985 223 aa8.84□□□□□ -0.99
UPK3A-202ENST00000396082 Q6ZVQ6 151 aa8.84□□□□□ -0.99
UPK3A-202ENST00000396082 COL5A1-AS1Q5SY13 56 aa8.83□□□□□ -1
UPK3A-202ENST00000396082 SPINK7P58062 85 aa8.79□□□□□ -1
UPK3A-202ENST00000396082 MPLKIPQ8TAP9 179 aa8.79□□□□□ -1
UPK3A-202ENST00000396082 K7EQZ3 153 aa8.78□□□□□ -1
UPK3A-202ENST00000396082 BPY2O14599 106 aa8.78□□□□□ -1
UPK3A-202ENST00000396082 TMEM254Q8TBM7 123 aa8.78□□□□□ -1
UPK3A-202ENST00000396082 MMP24-AS1A0A0U1RRL7 71 aa8.77□□□□□ -1.01
UPK3A-202ENST00000396082 MRPL34Q9BQ48 92 aaKnown RBP8.77□□□□□ -1.01
UPK3A-202ENST00000396082 SMCPP49901 116 aaPredicted RBP8.76□□□□□ -1.01
UPK3A-202ENST00000396082 hDV103S1A0JD37 113 aa8.74□□□□□ -1.01
UPK3A-202ENST00000396082 K7EP34 96 aa8.74□□□□□ -1.01
UPK3A-202ENST00000396082 NDUFS5O43920 106 aa8.74□□□□□ -1.01
UPK3A-202ENST00000396082 CRCT1Q9UGL9 99 aa8.72□□□□□ -1.01
UPK3A-202ENST00000396082 PCP4L1A6NKN8 68 aa8.69□□□□□ -1.02
UPK3A-202ENST00000396082 WFDC13Q8IUB5 93 aa8.69□□□□□ -1.02
UPK3A-202ENST00000396082 PRO0461Q9UI25 63 aa8.69□□□□□ -1.02
UPK3A-202ENST00000396082 GTF2H5Q6ZYL4 71 aa8.67□□□□□ -1.02
UPK3A-202ENST00000396082 Q8N9L7 120 aa8.67□□□□□ -1.02
UPK3A-202ENST00000396082 FSIP2Q5CZC0 6907 aa8.66□□□□□ -1.02
UPK3A-202ENST00000396082 UBL5Q9BZL1 73 aa8.66□□□□□ -1.02
UPK3A-202ENST00000396082 KRTAP9-8Q9BYQ0 159 aa8.65□□□□□ -1.02
UPK3A-202ENST00000396082 CASC2Q6XLA1 102 aa8.64□□□□□ -1.03
UPK3A-202ENST00000396082 LINC00846Q9NV44 126 aa8.63□□□□□ -1.03
UPK3A-202ENST00000396082 HCG22E2RYF7 251 aa8.59□□□□□ -1.03
UPK3A-202ENST00000396082 IGKV2D-30A0A075B6S6 120 aa8.57□□□□□ -1.04
UPK3A-202ENST00000396082 F8W1H4 67 aa8.57□□□□□ -1.04
UPK3A-202ENST00000396082 IGKV2-30P06310 120 aa8.57□□□□□ -1.04
UPK3A-202ENST00000396082 MT2AP02795 61 aa8.56□□□□□ -1.04
UPK3A-202ENST00000396082 C7orf65Q6ZTY9 151 aa8.55□□□□□ -1.04
UPK3A-202ENST00000396082 ETDBQ3ZM63 59 aa8.54□□□□□ -1.04
UPK3A-202ENST00000396082 Q5W150 140 aa8.54□□□□□ -1.04
UPK3A-202ENST00000396082 CXCL6P80162 114 aa8.52□□□□□ -1.05
UPK3A-202ENST00000396082 KRTAP10-10P60014 251 aa8.5□□□□□ -1.05
UPK3A-202ENST00000396082 MT1FP04733 61 aa8.49□□□□□ -1.05
UPK3A-202ENST00000396082 H1FX-AS1Q4G0G2 97 aa8.47□□□□□ -1.05
UPK3A-202ENST00000396082 C4orf26Q17RF5 130 aa8.39□□□□□ -1.07
UPK3A-202ENST00000396082 KRTAP9-3Q9BYQ3 159 aa8.38□□□□□ -1.07
UPK3A-202ENST00000396082 TP53AIP1Q9HCN2 124 aa8.38□□□□□ -1.07
UPK3A-202ENST00000396082 ACYP1P07311 99 aa8.35□□□□□ -1.07
UPK3A-202ENST00000396082 LCE2BO14633 110 aa8.33□□□□□ -1.08
UPK3A-202ENST00000396082 USH2AO75445 5202 aa8.3□□□□□ -1.08
UPK3A-202ENST00000396082 FAM240AA0A1B0GVK7 77 aa8.3□□□□□ -1.08
UPK3A-202ENST00000396082 ATP5EP2Q5VTU8 51 aa8.28□□□□□ -1.08
UPK3A-202ENST00000396082 HIST1H4AP62805 103 aaKnown RBP8.25□□□□□ -1.09
UPK3A-202ENST00000396082 C1orf64Q8NEQ6 169 aa8.25□□□□□ -1.09
UPK3A-202ENST00000396082 S4R3F8 94 aa8.22□□□□□ -1.09
UPK3A-202ENST00000396082 SSPOA2VEC9 5147 aa8.21□□□□□ -1.09
UPK3A-202ENST00000396082 TRAV22A0A0B4J277 110 aa8.21□□□□□ -1.1
UPK3A-202ENST00000396082 C5orf47Q569G3 176 aa8.21□□□□□ -1.1
UPK3A-202ENST00000396082 KRTAP3-1Q9BYR8 98 aa8.2□□□□□ -1.1
UPK3A-202ENST00000396082 A0A1B0GV90 55 aa8.18□□□□□ -1.1
UPK3A-202ENST00000396082 KRTAP19-1Q8IUB9 90 aa8.18□□□□□ -1.1
UPK3A-202ENST00000396082 CYP4F30PQ9H0H9 118 aa8.18□□□□□ -1.1
UPK3A-202ENST00000396082 LOC101927531A0A1B0GV80 90 aa8.16□□□□□ -1.1
UPK3A-202ENST00000396082 LINC00643Q86TS7 51 aa8.15□□□□□ -1.1
UPK3A-202ENST00000396082 CSAG1Q6PB30 78 aa8.14□□□□□ -1.11
UPK3A-202ENST00000396082 FAM236AA0A1B0GUQ0 79 aa8.13□□□□□ -1.11
UPK3A-202ENST00000396082 FAM236BA0A1B0GV22 79 aa8.13□□□□□ -1.11
UPK3A-202ENST00000396082 UQCRQO14949 82 aa8.13□□□□□ -1.11
UPK3A-202ENST00000396082 LCA10Q71F78 164 aa8.13□□□□□ -1.11
UPK3A-202ENST00000396082 A0A087WVE0 104 aa8.11□□□□□ -1.11
UPK3A-202ENST00000396082 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.11□□□□□ -1.11
UPK3A-202ENST00000396082 H0Y9P7 68 aa8.1□□□□□ -1.11
UPK3A-202ENST00000396082 ATOX1O00244 68 aa8.09□□□□□ -1.11
UPK3A-202ENST00000396082 J3QR89 54 aa8.03□□□□□ -1.12
UPK3A-202ENST00000396082 KRTAP19-6Q3LI70 58 aa8.03□□□□□ -1.12
UPK3A-202ENST00000396082 FCGBPQ9Y6R7 5405 aaPredicted RBP8.02□□□□□ -1.13
UPK3A-202ENST00000396082 KRTAP9-7A8MTY7 169 aa8□□□□□ -1.13
UPK3A-202ENST00000396082 LINC00208Q96KT6 92 aa7.98□□□□□ -1.13
UPK3A-202ENST00000396082 KRTAP3-3Q9BYR6 98 aa7.98□□□□□ -1.13
UPK3A-202ENST00000396082 MP68P56378 58 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms