RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 IGHV6-1A0A0B4J1U7 121 aa10.6□□□□□ -0.71
SNCA-203ENST00000394986 Q75L30 129 aa10.6□□□□□ -0.71
SNCA-203ENST00000394986 GTF2H5Q6ZYL4 71 aa10.59□□□□□ -0.71
SNCA-203ENST00000394986 LINC00313P59037 77 aa10.58□□□□□ -0.72
SNCA-203ENST00000394986 A0A0U1RQV1 116 aa10.58□□□□□ -0.72
SNCA-203ENST00000394986 A0A1B0GVX0 72 aa10.57□□□□□ -0.72
SNCA-203ENST00000394986 J3KT08 172 aa10.57□□□□□ -0.72
SNCA-203ENST00000394986 C20orf166-AS1Q96NR2 134 aa10.57□□□□□ -0.72
SNCA-203ENST00000394986 KRTAP16-1A8MUX0 517 aa10.55□□□□□ -0.72
SNCA-203ENST00000394986 NREPQ16612 68 aa10.55□□□□□ -0.72
SNCA-203ENST00000394986 A8MUU9 505 aa10.54□□□□□ -0.72
SNCA-203ENST00000394986 FAT4Q6V0I7 4981 aa10.54□□□□□ -0.72
SNCA-203ENST00000394986 ATP11AUNQ6ZP68 121 aa10.52□□□□□ -0.73
SNCA-203ENST00000394986 C8orf87E5RJ46 101 aa10.5□□□□□ -0.73
SNCA-203ENST00000394986 A8MWP4 228 aa10.49□□□□□ -0.73
SNCA-203ENST00000394986 IGKV3D-7A0A0C4DH55 119 aa10.48□□□□□ -0.73
SNCA-203ENST00000394986 F8W1H4 67 aa10.48□□□□□ -0.73
SNCA-203ENST00000394986 NDUFB1O75438 58 aa10.48□□□□□ -0.73
SNCA-203ENST00000394986 ETDBQ3ZM63 59 aa10.45□□□□□ -0.74
SNCA-203ENST00000394986 Q6ZVQ6 151 aa10.43□□□□□ -0.74
SNCA-203ENST00000394986 C8orf17Q9NRJ1 99 aa10.42□□□□□ -0.74
SNCA-203ENST00000394986 PRR15Q8IV56 129 aa10.41□□□□□ -0.74
SNCA-203ENST00000394986 KRTAP19-2Q3LHN2 52 aa10.41□□□□□ -0.74
SNCA-203ENST00000394986 LINC00846Q9NV44 126 aa10.4□□□□□ -0.75
SNCA-203ENST00000394986 K7EQZ3 153 aa10.39□□□□□ -0.75
SNCA-203ENST00000394986 BPY2O14599 106 aa10.39□□□□□ -0.75
SNCA-203ENST00000394986 LCE2AQ5TA79 106 aaPredicted RBP10.39□□□□□ -0.75
SNCA-203ENST00000394986 LCE2CQ5TA81 110 aa10.36□□□□□ -0.75
SNCA-203ENST00000394986 A0A1B0GV90 55 aa10.35□□□□□ -0.75
SNCA-203ENST00000394986 MMP24-AS1A0A0U1RRL7 71 aa10.34□□□□□ -0.75
SNCA-203ENST00000394986 Q8N9L7 120 aa10.33□□□□□ -0.76
SNCA-203ENST00000394986 UBL5Q9BZL1 73 aa10.33□□□□□ -0.76
SNCA-203ENST00000394986 Q8N9P0 234 aaPredicted RBP10.31□□□□□ -0.76
SNCA-203ENST00000394986 TMEM254Q8TBM7 123 aa10.26□□□□□ -0.77
SNCA-203ENST00000394986 ZCCHC13Q8WW36 166 aaKnown RBP10.26□□□□□ -0.77
SNCA-203ENST00000394986 hDV103S1A0JD37 113 aa10.25□□□□□ -0.77
SNCA-203ENST00000394986 MRPL34Q9BQ48 92 aaKnown RBP10.25□□□□□ -0.77
SNCA-203ENST00000394986 COX6B2Q6YFQ2 88 aa10.24□□□□□ -0.77
SNCA-203ENST00000394986 WFDC13Q8IUB5 93 aa10.22□□□□□ -0.77
SNCA-203ENST00000394986 MT1HP80294 61 aa10.21□□□□□ -0.78
SNCA-203ENST00000394986 NDUFS5O43920 106 aa10.18□□□□□ -0.78
SNCA-203ENST00000394986 CASC2Q6XLA1 102 aa10.17□□□□□ -0.78
SNCA-203ENST00000394986 HRES1P13985 223 aa10.14□□□□□ -0.79
SNCA-203ENST00000394986 CXCL6P80162 114 aa10.13□□□□□ -0.79
SNCA-203ENST00000394986 ACYP1P07311 99 aa10.12□□□□□ -0.79
SNCA-203ENST00000394986 FAM240AA0A1B0GVK7 77 aa10.11□□□□□ -0.79
SNCA-203ENST00000394986 HCG22E2RYF7 251 aa10.11□□□□□ -0.79
SNCA-203ENST00000394986 SPINK7P58062 85 aa10.11□□□□□ -0.79
SNCA-203ENST00000394986 FLGP20930 4061 aaPredicted RBP10.08□□□□□ -0.8
SNCA-203ENST00000394986 MPLKIPQ8TAP9 179 aa10.07□□□□□ -0.8
SNCA-203ENST00000394986 Q5W150 140 aa10.06□□□□□ -0.8
SNCA-203ENST00000394986 FAM236DA0A1B0GTK5 79 aa10.04□□□□□ -0.8
SNCA-203ENST00000394986 FAM236CP0DP71 79 aa10.04□□□□□ -0.8
SNCA-203ENST00000394986 M0R2T5 61 aa10.03□□□□□ -0.8
SNCA-203ENST00000394986 RBM12B-AS1Q9P1G2 102 aa10.02□□□□□ -0.81
SNCA-203ENST00000394986 ATP5EP2Q5VTU8 51 aa9.98□□□□□ -0.81
SNCA-203ENST00000394986 IGKV2D-30A0A075B6S6 120 aa9.96□□□□□ -0.82
SNCA-203ENST00000394986 IGKV2-30P06310 120 aa9.96□□□□□ -0.82
SNCA-203ENST00000394986 KRTAP10-6P60371 365 aaPredicted RBP9.95□□□□□ -0.82
SNCA-203ENST00000394986 LORP23490 312 aaPredicted RBP9.92□□□□□ -0.82
SNCA-203ENST00000394986 HIST1H4AP62805 103 aaKnown RBP9.92□□□□□ -0.82
SNCA-203ENST00000394986 LINC00643Q86TS7 51 aa9.92□□□□□ -0.82
SNCA-203ENST00000394986 C7orf65Q6ZTY9 151 aa9.9□□□□□ -0.82
SNCA-203ENST00000394986 A0A087WVE0 104 aa9.87□□□□□ -0.83
SNCA-203ENST00000394986 J3QR89 54 aa9.87□□□□□ -0.83
SNCA-203ENST00000394986 TP53AIP1Q9HCN2 124 aa9.86□□□□□ -0.83
SNCA-203ENST00000394986 KRTAP9-2Q9BYQ4 174 aa9.84□□□□□ -0.83
SNCA-203ENST00000394986 C4orf26Q17RF5 130 aa9.75□□□□□ -0.85
SNCA-203ENST00000394986 TRAV22A0A0B4J277 110 aa9.72□□□□□ -0.85
SNCA-203ENST00000394986 H1FX-AS1Q4G0G2 97 aa9.7□□□□□ -0.86
SNCA-203ENST00000394986 KRTAP9-8Q9BYQ0 159 aa9.7□□□□□ -0.86
SNCA-203ENST00000394986 K7ERU9 68 aa9.67□□□□□ -0.86
SNCA-203ENST00000394986 UQCRQO14949 82 aa9.67□□□□□ -0.86
SNCA-203ENST00000394986 CYP4F30PQ9H0H9 118 aa9.65□□□□□ -0.87
SNCA-203ENST00000394986 H0Y9P7 68 aa9.64□□□□□ -0.87
SNCA-203ENST00000394986 LCE2BO14633 110 aa9.63□□□□□ -0.87
SNCA-203ENST00000394986 LOC101927531A0A1B0GV80 90 aa9.62□□□□□ -0.87
SNCA-203ENST00000394986 MT2AP02795 61 aa9.62□□□□□ -0.87
SNCA-203ENST00000394986 KRTAP3-1Q9BYR8 98 aa9.62□□□□□ -0.87
SNCA-203ENST00000394986 OCR1Q9BZK8 76 aa9.6□□□□□ -0.87
SNCA-203ENST00000394986 MT-ATP8P03928 68 aa9.59□□□□□ -0.87
SNCA-203ENST00000394986 C1orf64Q8NEQ6 169 aa9.59□□□□□ -0.87
SNCA-203ENST00000394986 ATOX1O00244 68 aa9.57□□□□□ -0.88
SNCA-203ENST00000394986 MT1FP04733 61 aa9.56□□□□□ -0.88
SNCA-203ENST00000394986 LINC00208Q96KT6 92 aa9.52□□□□□ -0.89
SNCA-203ENST00000394986 SCGB1A1P11684 91 aa9.51□□□□□ -0.89
SNCA-203ENST00000394986 IMUPQ9GZP8 106 aa9.5□□□□□ -0.89
SNCA-203ENST00000394986 MP68P56378 58 aa9.48□□□□□ -0.89
SNCA-203ENST00000394986 KRTAP10-10P60014 251 aa9.48□□□□□ -0.89
SNCA-203ENST00000394986 S4R3F8 94 aa9.47□□□□□ -0.89
SNCA-203ENST00000394986 KLKP1Q107X0 134 aa9.44□□□□□ -0.9
SNCA-203ENST00000394986 C5orf47Q569G3 176 aa9.44□□□□□ -0.9
SNCA-203ENST00000394986 FSIP2Q5CZC0 6907 aa9.43□□□□□ -0.9
SNCA-203ENST00000394986 LCA10Q71F78 164 aa9.42□□□□□ -0.9
SNCA-203ENST00000394986 FAM236AA0A1B0GUQ0 79 aa9.41□□□□□ -0.9
SNCA-203ENST00000394986 FAM236BA0A1B0GV22 79 aa9.41□□□□□ -0.9
SNCA-203ENST00000394986 KRTAP9-6A0A140TA67 174 aa9.39□□□□□ -0.91
SNCA-203ENST00000394986 KRTAP9-3Q9BYQ3 159 aa9.39□□□□□ -0.91
SNCA-203ENST00000394986 H3BPC8 53 aa9.35□□□□□ -0.91
SNCA-203ENST00000394986 CRCT1Q9UGL9 99 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms