RNA–Protein interactions for RNA: ENST00000388835.3

KRT18-201, Transcript of keratin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT18, Length 1,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-201ENST00000388835 MT2AP02795 61 aa12.73□□□□□ -0.37
KRT18-201ENST00000388835 BAALC-AS2P0C853 105 aa12.72□□□□□ -0.37
KRT18-201ENST00000388835 C9JAW5 83 aa12.69□□□□□ -0.38
KRT18-201ENST00000388835 USH2AO75445 5202 aa12.67□□□□□ -0.38
KRT18-201ENST00000388835 J3KT08 172 aa12.65□□□□□ -0.38
KRT18-201ENST00000388835 ZCCHC13Q8WW36 166 aaKnown RBP12.65□□□□□ -0.38
KRT18-201ENST00000388835 MT1FP04733 61 aa12.64□□□□□ -0.39
KRT18-201ENST00000388835 Q6ZQT0 140 aa12.64□□□□□ -0.39
KRT18-201ENST00000388835 C21orf62-AS1Q17RA5 79 aa12.62□□□□□ -0.39
KRT18-201ENST00000388835 SSPOA2VEC9 5147 aa12.62□□□□□ -0.39
KRT18-201ENST00000388835 NAA38Q9BRA0 125 aaKnown RBP12.6□□□□□ -0.39
KRT18-201ENST00000388835 NDUFB1O75438 58 aa12.59□□□□□ -0.39
KRT18-201ENST00000388835 SPINK7P58062 85 aa12.59□□□□□ -0.39
KRT18-201ENST00000388835 KRTAP10-10P60014 251 aa12.59□□□□□ -0.39
KRT18-201ENST00000388835 MTURNQ8N3F0 131 aa12.59□□□□□ -0.39
KRT18-201ENST00000388835 ATXN8Q156A1 80 aa12.56□□□□□ -0.4
KRT18-201ENST00000388835 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.55□□□□□ -0.4
KRT18-201ENST00000388835 LCE2BO14633 110 aa12.53□□□□□ -0.4
KRT18-201ENST00000388835 Q8N9P0 234 aaPredicted RBP12.53□□□□□ -0.4
KRT18-201ENST00000388835 JMJD7-PLA2G4BH0Y9G9 81 aa12.52□□□□□ -0.4
KRT18-201ENST00000388835 LYRM7Q5U5X0 104 aa12.52□□□□□ -0.41
KRT18-201ENST00000388835 KRTAP9-3Q9BYQ3 159 aa12.52□□□□□ -0.41
KRT18-201ENST00000388835 C8orf17Q9NRJ1 99 aa12.52□□□□□ -0.41
KRT18-201ENST00000388835 A8MWP4 228 aa12.5□□□□□ -0.41
KRT18-201ENST00000388835 LOC110117498A0A087WWA1 95 aa12.49□□□□□ -0.41
KRT18-201ENST00000388835 M0R143 59 aa12.49□□□□□ -0.41
KRT18-201ENST00000388835 IGKV3D-7A0A0C4DH55 119 aa12.47□□□□□ -0.41
KRT18-201ENST00000388835 KRTAP9-7A8MTY7 169 aa12.47□□□□□ -0.41
KRT18-201ENST00000388835 C14orf132Q9NPU4 83 aa12.47□□□□□ -0.41
KRT18-201ENST00000388835 WFDC13Q8IUB5 93 aa12.44□□□□□ -0.42
KRT18-201ENST00000388835 A0A1B0GW54 56 aa12.43□□□□□ -0.42
KRT18-201ENST00000388835 PDE6GP18545 87 aa12.42□□□□□ -0.42
KRT18-201ENST00000388835 Q6ZVQ6 151 aa12.42□□□□□ -0.42
KRT18-201ENST00000388835 KRTAP19-1Q8IUB9 90 aa12.42□□□□□ -0.42
KRT18-201ENST00000388835 FCGBPQ9Y6R7 5405 aaPredicted RBP12.37□□□□□ -0.43
KRT18-201ENST00000388835 NREPQ16612 68 aa12.37□□□□□ -0.43
KRT18-201ENST00000388835 PRR15Q8IV56 129 aa12.37□□□□□ -0.43
KRT18-201ENST00000388835 MMP24-AS1A0A0U1RRL7 71 aa12.3□□□□□ -0.44
KRT18-201ENST00000388835 MRPL34Q9BQ48 92 aaKnown RBP12.29□□□□□ -0.44
KRT18-201ENST00000388835 TMEM254Q8TBM7 123 aa12.28□□□□□ -0.44
KRT18-201ENST00000388835 BATFQ16520 125 aa12.27□□□□□ -0.44
KRT18-201ENST00000388835 NDUFS5O43920 106 aa12.24□□□□□ -0.45
KRT18-201ENST00000388835 K7EQZ3 153 aa12.23□□□□□ -0.45
KRT18-201ENST00000388835 SMIM6P0DI80 62 aa12.23□□□□□ -0.45
KRT18-201ENST00000388835 hDV103S1A0JD37 113 aa12.22□□□□□ -0.45
KRT18-201ENST00000388835 H1FX-AS1Q4G0G2 97 aa12.16□□□□□ -0.46
KRT18-201ENST00000388835 TSTD3H0UI37 97 aa12.15□□□□□ -0.46
KRT18-201ENST00000388835 H3BT86 120 aa12.14□□□□□ -0.47
KRT18-201ENST00000388835 IGKV2D-30A0A075B6S6 120 aa12.13□□□□□ -0.47
KRT18-201ENST00000388835 IGKV2-30P06310 120 aa12.13□□□□□ -0.47
KRT18-201ENST00000388835 BPY2O14599 106 aa12.12□□□□□ -0.47
KRT18-201ENST00000388835 C9orf118A6NHY6 69 aa12.11□□□□□ -0.47
KRT18-201ENST00000388835 LINC00846Q9NV44 126 aa12.1□□□□□ -0.47
KRT18-201ENST00000388835 KRTAP19-6Q3LI70 58 aa12.09□□□□□ -0.47
KRT18-201ENST00000388835 Q5W150 140 aa12.08□□□□□ -0.48
KRT18-201ENST00000388835 A0A1W2PPM0 123 aa12.07□□□□□ -0.48
KRT18-201ENST00000388835 MACF1Q9UPN3 7388 aaKnown RBP12.06□□□□□ -0.48
KRT18-201ENST00000388835 TAX1BP3O14907 124 aa12.06□□□□□ -0.48
KRT18-201ENST00000388835 C7orf65Q6ZTY9 151 aa12.05□□□□□ -0.48
KRT18-201ENST00000388835 Q8N9L7 120 aa12.05□□□□□ -0.48
KRT18-201ENST00000388835 CASC2Q6XLA1 102 aa12□□□□□ -0.49
KRT18-201ENST00000388835 HCG22E2RYF7 251 aa11.99□□□□□ -0.49
KRT18-201ENST00000388835 SYNE2Q8WXH0 6885 aaKnown RBP11.97□□□□□ -0.49
KRT18-201ENST00000388835 C4orf26Q17RF5 130 aa11.93□□□□□ -0.5
KRT18-201ENST00000388835 SPCS1Q9Y6A9 102 aa11.9□□□□□ -0.5
KRT18-201ENST00000388835 SMCPP49901 116 aaPredicted RBP11.87□□□□□ -0.51
KRT18-201ENST00000388835 CXCL6P80162 114 aa11.86□□□□□ -0.51
KRT18-201ENST00000388835 LOC105371267A0A1B0GV96 52 aa11.84□□□□□ -0.51
KRT18-201ENST00000388835 C5orf47Q569G3 176 aa11.79□□□□□ -0.52
KRT18-201ENST00000388835 UBL5Q9BZL1 73 aa11.79□□□□□ -0.52
KRT18-201ENST00000388835 KRTAP3-1Q9BYR8 98 aa11.72□□□□□ -0.53
KRT18-201ENST00000388835 FAM236AA0A1B0GUQ0 79 aa11.71□□□□□ -0.53
KRT18-201ENST00000388835 FAM236BA0A1B0GV22 79 aa11.71□□□□□ -0.53
KRT18-201ENST00000388835 PRO0461Q9UI25 63 aa11.71□□□□□ -0.54
KRT18-201ENST00000388835 S4R3F8 94 aa11.69□□□□□ -0.54
KRT18-201ENST00000388835 C1orf64Q8NEQ6 169 aa11.67□□□□□ -0.54
KRT18-201ENST00000388835 COL5A1-AS1Q5SY13 56 aa11.65□□□□□ -0.54
KRT18-201ENST00000388835 KRTAP6-3Q3LI67 103 aa11.64□□□□□ -0.55
KRT18-201ENST00000388835 K7EP34 96 aa11.63□□□□□ -0.55
KRT18-201ENST00000388835 CSAG1Q6PB30 78 aa11.61□□□□□ -0.55
KRT18-201ENST00000388835 LCA10Q71F78 164 aa11.61□□□□□ -0.55
KRT18-201ENST00000388835 TP53AIP1Q9HCN2 124 aa11.56□□□□□ -0.56
KRT18-201ENST00000388835 MT1BP07438 61 aa11.53□□□□□ -0.56
KRT18-201ENST00000388835 Q5VV11 94 aa11.51□□□□□ -0.57
KRT18-201ENST00000388835 A6NN06 94 aa11.5□□□□□ -0.57
KRT18-201ENST00000388835 SPRR2GQ9BYE4 73 aa11.48□□□□□ -0.57
KRT18-201ENST00000388835 KRTAP19-8Q3LI54 63 aa11.45□□□□□ -0.58
KRT18-201ENST00000388835 GTF2H5Q6ZYL4 71 aa11.45□□□□□ -0.58
KRT18-201ENST00000388835 ETDBQ3ZM63 59 aa11.42□□□□□ -0.58
KRT18-201ENST00000388835 KLKP1Q107X0 134 aa11.41□□□□□ -0.58
KRT18-201ENST00000388835 KRTAP3-3Q9BYR6 98 aa11.4□□□□□ -0.58
KRT18-201ENST00000388835 CYP4F30PQ9H0H9 118 aa11.4□□□□□ -0.58
KRT18-201ENST00000388835 F8W1H4 67 aa11.39□□□□□ -0.59
KRT18-201ENST00000388835 A0A087WVE0 104 aa11.34□□□□□ -0.59
KRT18-201ENST00000388835 TRAV22A0A0B4J277 110 aa11.31□□□□□ -0.6
KRT18-201ENST00000388835 KRTAP10-5P60370 271 aa11.29□□□□□ -0.6
KRT18-201ENST00000388835 LOC101927531A0A1B0GV80 90 aa11.27□□□□□ -0.61
KRT18-201ENST00000388835 NEBP20929 6669 aa11.25□□□□□ -0.61
KRT18-201ENST00000388835 PCP4L1A6NKN8 68 aa11.24□□□□□ -0.61
KRT18-201ENST00000388835 CRIPTQ9P021 101 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms