RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 C21orf62-AS1Q17RA5 79 aa10.57□□□□□ -0.72
VSX1-201ENST00000376707 RBM12B-AS1Q9P1G2 102 aa10.57□□□□□ -0.72
VSX1-201ENST00000376707 C9JAW5 83 aa10.56□□□□□ -0.72
VSX1-201ENST00000376707 A0A1B0GVX0 72 aa10.55□□□□□ -0.72
VSX1-201ENST00000376707 C8orf87E5RJ46 101 aa10.55□□□□□ -0.72
VSX1-201ENST00000376707 M0R143 59 aa10.54□□□□□ -0.72
VSX1-201ENST00000376707 HRES1P13985 223 aa10.53□□□□□ -0.72
VSX1-201ENST00000376707 J3KT08 172 aa10.52□□□□□ -0.73
VSX1-201ENST00000376707 Q6ZQT0 140 aa10.52□□□□□ -0.73
VSX1-201ENST00000376707 ATXN8Q156A1 80 aa10.51□□□□□ -0.73
VSX1-201ENST00000376707 MPLKIPQ8TAP9 179 aa10.51□□□□□ -0.73
VSX1-201ENST00000376707 USH2AO75445 5202 aa10.49□□□□□ -0.73
VSX1-201ENST00000376707 MT2AP02795 61 aa10.48□□□□□ -0.73
VSX1-201ENST00000376707 A0A1B0GW54 56 aa10.47□□□□□ -0.73
VSX1-201ENST00000376707 JMJD7-PLA2G4BH0Y9G9 81 aa10.47□□□□□ -0.73
VSX1-201ENST00000376707 NAA38Q9BRA0 125 aaKnown RBP10.47□□□□□ -0.73
VSX1-201ENST00000376707 LOC110117498A0A087WWA1 95 aa10.46□□□□□ -0.73
VSX1-201ENST00000376707 SMIM6P0DI80 62 aa10.45□□□□□ -0.74
VSX1-201ENST00000376707 SSPOA2VEC9 5147 aa10.43□□□□□ -0.74
VSX1-201ENST00000376707 PDE6GP18545 87 aa10.42□□□□□ -0.74
VSX1-201ENST00000376707 NDUFB1O75438 58 aa10.41□□□□□ -0.74
VSX1-201ENST00000376707 ZCCHC13Q8WW36 166 aaKnown RBP10.41□□□□□ -0.74
VSX1-201ENST00000376707 MT1FP04733 61 aa10.4□□□□□ -0.74
VSX1-201ENST00000376707 MTURNQ8N3F0 131 aa10.4□□□□□ -0.74
VSX1-201ENST00000376707 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.39□□□□□ -0.75
VSX1-201ENST00000376707 Q8N9P0 234 aaPredicted RBP10.39□□□□□ -0.75
VSX1-201ENST00000376707 A8MWP4 228 aa10.38□□□□□ -0.75
VSX1-201ENST00000376707 KRTAP10-10P60014 251 aa10.38□□□□□ -0.75
VSX1-201ENST00000376707 LYRM7Q5U5X0 104 aa10.38□□□□□ -0.75
VSX1-201ENST00000376707 C14orf132Q9NPU4 83 aa10.36□□□□□ -0.75
VSX1-201ENST00000376707 C8orf17Q9NRJ1 99 aa10.35□□□□□ -0.75
VSX1-201ENST00000376707 KRTAP9-7A8MTY7 169 aa10.34□□□□□ -0.75
VSX1-201ENST00000376707 SPINK7P58062 85 aa10.34□□□□□ -0.75
VSX1-201ENST00000376707 IGKV3D-7A0A0C4DH55 119 aa10.33□□□□□ -0.76
VSX1-201ENST00000376707 TSTD3H0UI37 97 aa10.32□□□□□ -0.76
VSX1-201ENST00000376707 KRTAP9-3Q9BYQ3 159 aa10.31□□□□□ -0.76
VSX1-201ENST00000376707 PRR15Q8IV56 129 aa10.28□□□□□ -0.76
VSX1-201ENST00000376707 BATFQ16520 125 aa10.27□□□□□ -0.77
VSX1-201ENST00000376707 NREPQ16612 68 aa10.26□□□□□ -0.77
VSX1-201ENST00000376707 Q6ZVQ6 151 aa10.26□□□□□ -0.77
VSX1-201ENST00000376707 FCGBPQ9Y6R7 5405 aaPredicted RBP10.25□□□□□ -0.77
VSX1-201ENST00000376707 KRTAP19-1Q8IUB9 90 aa10.24□□□□□ -0.77
VSX1-201ENST00000376707 C9orf118A6NHY6 69 aa10.23□□□□□ -0.77
VSX1-201ENST00000376707 WFDC13Q8IUB5 93 aa10.23□□□□□ -0.77
VSX1-201ENST00000376707 H3BT86 120 aa10.22□□□□□ -0.77
VSX1-201ENST00000376707 MMP24-AS1A0A0U1RRL7 71 aa10.19□□□□□ -0.78
VSX1-201ENST00000376707 LOC100996750A0A140TA64 210 aa10.19□□□□□ -0.78
VSX1-201ENST00000376707 TAX1BP3O14907 124 aa10.19□□□□□ -0.78
VSX1-201ENST00000376707 TMEM254Q8TBM7 123 aa10.19□□□□□ -0.78
VSX1-201ENST00000376707 KRTAP4-6Q9BYQ5 205 aa10.19□□□□□ -0.78
VSX1-201ENST00000376707 A0A1W2PPM0 123 aa10.18□□□□□ -0.78
VSX1-201ENST00000376707 MRPL34Q9BQ48 92 aaKnown RBP10.17□□□□□ -0.78
VSX1-201ENST00000376707 LOC105371267A0A1B0GV96 52 aa10.15□□□□□ -0.78
VSX1-201ENST00000376707 K7EQZ3 153 aa10.13□□□□□ -0.79
VSX1-201ENST00000376707 hDV103S1A0JD37 113 aa10.11□□□□□ -0.79
VSX1-201ENST00000376707 BPY2O14599 106 aa10.07□□□□□ -0.8
VSX1-201ENST00000376707 LINC00846Q9NV44 126 aa10.07□□□□□ -0.8
VSX1-201ENST00000376707 NDUFS5O43920 106 aa10.04□□□□□ -0.8
VSX1-201ENST00000376707 SPCS1Q9Y6A9 102 aa10.02□□□□□ -0.81
VSX1-201ENST00000376707 KRTAP19-6Q3LI70 58 aa10□□□□□ -0.81
VSX1-201ENST00000376707 H1FX-AS1Q4G0G2 97 aa10□□□□□ -0.81
VSX1-201ENST00000376707 Q5W150 140 aa9.98□□□□□ -0.81
VSX1-201ENST00000376707 MACF1Q9UPN3 7388 aaKnown RBP9.97□□□□□ -0.81
VSX1-201ENST00000376707 Q8N9L7 120 aa9.96□□□□□ -0.82
VSX1-201ENST00000376707 IGKV2D-30A0A075B6S6 120 aa9.94□□□□□ -0.82
VSX1-201ENST00000376707 IGKV2-30P06310 120 aa9.94□□□□□ -0.82
VSX1-201ENST00000376707 CASC2Q6XLA1 102 aa9.94□□□□□ -0.82
VSX1-201ENST00000376707 C7orf65Q6ZTY9 151 aa9.93□□□□□ -0.82
VSX1-201ENST00000376707 SYNE2Q8WXH0 6885 aaKnown RBP9.92□□□□□ -0.82
VSX1-201ENST00000376707 PRO0461Q9UI25 63 aa9.91□□□□□ -0.82
VSX1-201ENST00000376707 COL5A1-AS1Q5SY13 56 aa9.9□□□□□ -0.82
VSX1-201ENST00000376707 HCG22E2RYF7 251 aa9.89□□□□□ -0.83
VSX1-201ENST00000376707 CXCL6P80162 114 aa9.87□□□□□ -0.83
VSX1-201ENST00000376707 UBL5Q9BZL1 73 aa9.86□□□□□ -0.83
VSX1-201ENST00000376707 K7EP34 96 aa9.85□□□□□ -0.83
VSX1-201ENST00000376707 C4orf26Q17RF5 130 aa9.78□□□□□ -0.84
VSX1-201ENST00000376707 GTF2H5Q6ZYL4 71 aa9.7□□□□□ -0.86
VSX1-201ENST00000376707 F8W1H4 67 aa9.68□□□□□ -0.86
VSX1-201ENST00000376707 C5orf47Q569G3 176 aa9.67□□□□□ -0.86
VSX1-201ENST00000376707 KRTAP3-1Q9BYR8 98 aa9.67□□□□□ -0.86
VSX1-201ENST00000376707 TP53AIP1Q9HCN2 124 aa9.66□□□□□ -0.86
VSX1-201ENST00000376707 KRTAP6-3Q3LI67 103 aa9.65□□□□□ -0.86
VSX1-201ENST00000376707 FAM236AA0A1B0GUQ0 79 aa9.64□□□□□ -0.87
VSX1-201ENST00000376707 FAM236BA0A1B0GV22 79 aa9.64□□□□□ -0.87
VSX1-201ENST00000376707 ETDBQ3ZM63 59 aa9.63□□□□□ -0.87
VSX1-201ENST00000376707 C1orf64Q8NEQ6 169 aa9.6□□□□□ -0.87
VSX1-201ENST00000376707 S4R3F8 94 aa9.6□□□□□ -0.87
VSX1-201ENST00000376707 CSAG1Q6PB30 78 aa9.56□□□□□ -0.88
VSX1-201ENST00000376707 LCA10Q71F78 164 aa9.53□□□□□ -0.88
VSX1-201ENST00000376707 PCP4L1A6NKN8 68 aa9.52□□□□□ -0.89
VSX1-201ENST00000376707 A6NN06 94 aa9.5□□□□□ -0.89
VSX1-201ENST00000376707 Q5VV11 94 aa9.5□□□□□ -0.89
VSX1-201ENST00000376707 MT1BP07438 61 aa9.48□□□□□ -0.89
VSX1-201ENST00000376707 CYP4F30PQ9H0H9 118 aa9.48□□□□□ -0.89
VSX1-201ENST00000376707 SPRR2GQ9BYE4 73 aa9.46□□□□□ -0.9
VSX1-201ENST00000376707 ACYP1P07311 99 aa9.45□□□□□ -0.9
VSX1-201ENST00000376707 TRAV22A0A0B4J277 110 aa9.43□□□□□ -0.9
VSX1-201ENST00000376707 KRTAP19-8Q3LI54 63 aa9.43□□□□□ -0.9
VSX1-201ENST00000376707 FAM240AA0A1B0GVK7 77 aa9.41□□□□□ -0.9
VSX1-201ENST00000376707 LOC101927531A0A1B0GV80 90 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms