RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 HSD52Q0P140 79 aa9.14□□□□□ -0.95
HDAC6-202ENST00000376610 UBE2V1Q13404 147 aa9.14□□□□□ -0.95
HDAC6-202ENST00000376610 A0A1B0GVX0 72 aa9.13□□□□□ -0.95
HDAC6-202ENST00000376610 K7ERJ3 54 aa9.13□□□□□ -0.95
HDAC6-202ENST00000376610 LCE2BO14633 110 aa9.1□□□□□ -0.95
HDAC6-202ENST00000376610 RBM3P98179 157 aaKnown RBP9.1□□□□□ -0.95
HDAC6-202ENST00000376610 DSCR8Q96T75 97 aa9.1□□□□□ -0.95
HDAC6-202ENST00000376610 KRTAP9-3Q9BYQ3 159 aa9.1□□□□□ -0.95
HDAC6-202ENST00000376610 C21orf62-AS1Q17RA5 79 aa9.09□□□□□ -0.95
HDAC6-202ENST00000376610 KRTAP19-1Q8IUB9 90 aa9.09□□□□□ -0.95
HDAC6-202ENST00000376610 ZCCHC13Q8WW36 166 aaKnown RBP9.09□□□□□ -0.95
HDAC6-202ENST00000376610 J3KT08 172 aa9.08□□□□□ -0.96
HDAC6-202ENST00000376610 SCGB1C2P0DMR2 95 aa9.05□□□□□ -0.96
HDAC6-202ENST00000376610 SPINK7P58062 85 aa9.05□□□□□ -0.96
HDAC6-202ENST00000376610 NDUFB1O75438 58 aa9.04□□□□□ -0.96
HDAC6-202ENST00000376610 LINC00846Q9NV44 126 aa9.03□□□□□ -0.96
HDAC6-202ENST00000376610 C9JAW5 83 aa9.02□□□□□ -0.97
HDAC6-202ENST00000376610 LYRM7Q5U5X0 104 aa9.01□□□□□ -0.97
HDAC6-202ENST00000376610 Q6ZQT0 140 aa8.98□□□□□ -0.97
HDAC6-202ENST00000376610 BAALC-AS2P0C853 105 aa8.97□□□□□ -0.97
HDAC6-202ENST00000376610 PYY3Q5JQD4 70 aa8.97□□□□□ -0.97
HDAC6-202ENST00000376610 UQCR10Q9UDW1 63 aa8.97□□□□□ -0.97
HDAC6-202ENST00000376610 A8MWP4 228 aa8.96□□□□□ -0.98
HDAC6-202ENST00000376610 WFDC13Q8IUB5 93 aa8.96□□□□□ -0.98
HDAC6-202ENST00000376610 Q8N9P0 234 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-202ENST00000376610 MACF1Q9UPN3 7388 aaKnown RBP8.95□□□□□ -0.98
HDAC6-202ENST00000376610 SYNE2Q8WXH0 6885 aaKnown RBP8.93□□□□□ -0.98
HDAC6-202ENST00000376610 C8orf17Q9NRJ1 99 aa8.92□□□□□ -0.98
HDAC6-202ENST00000376610 A0A1B0GW54 56 aa8.9□□□□□ -0.98
HDAC6-202ENST00000376610 JMJD7-PLA2G4BH0Y9G9 81 aa8.89□□□□□ -0.99
HDAC6-202ENST00000376610 PDE6GP18545 87 aa8.86□□□□□ -0.99
HDAC6-202ENST00000376610 KRTAP19-6Q3LI70 58 aa8.86□□□□□ -0.99
HDAC6-202ENST00000376610 Q6ZVQ6 151 aa8.86□□□□□ -0.99
HDAC6-202ENST00000376610 IGKV3D-7A0A0C4DH55 119 aa8.85□□□□□ -0.99
HDAC6-202ENST00000376610 ATXN8Q156A1 80 aa8.85□□□□□ -0.99
HDAC6-202ENST00000376610 LOC110117498A0A087WWA1 95 aa8.84□□□□□ -0.99
HDAC6-202ENST00000376610 PRR15Q8IV56 129 aa8.8□□□□□ -1
HDAC6-202ENST00000376610 NREPQ16612 68 aa8.79□□□□□ -1
HDAC6-202ENST00000376610 TMEM254Q8TBM7 123 aa8.78□□□□□ -1
HDAC6-202ENST00000376610 C14orf132Q9NPU4 83 aa8.78□□□□□ -1
HDAC6-202ENST00000376610 H1FX-AS1Q4G0G2 97 aa8.77□□□□□ -1.01
HDAC6-202ENST00000376610 MRPL34Q9BQ48 92 aaKnown RBP8.77□□□□□ -1.01
HDAC6-202ENST00000376610 M0R143 59 aa8.76□□□□□ -1.01
HDAC6-202ENST00000376610 NDUFS5O43920 106 aa8.75□□□□□ -1.01
HDAC6-202ENST00000376610 NAA38Q9BRA0 125 aaKnown RBP8.74□□□□□ -1.01
HDAC6-202ENST00000376610 MMP24-AS1A0A0U1RRL7 71 aa8.73□□□□□ -1.01
HDAC6-202ENST00000376610 hDV103S1A0JD37 113 aa8.71□□□□□ -1.02
HDAC6-202ENST00000376610 TMA7Q9Y2S6 64 aaKnown RBP8.71□□□□□ -1.02
HDAC6-202ENST00000376610 IGKV2D-30A0A075B6S6 120 aa8.68□□□□□ -1.02
HDAC6-202ENST00000376610 IGKV2-30P06310 120 aa8.68□□□□□ -1.02
HDAC6-202ENST00000376610 K7EQZ3 153 aa8.66□□□□□ -1.02
HDAC6-202ENST00000376610 C7orf65Q6ZTY9 151 aa8.65□□□□□ -1.02
HDAC6-202ENST00000376610 KRTAP6-3Q3LI67 103 aa8.62□□□□□ -1.03
HDAC6-202ENST00000376610 BPY2O14599 106 aa8.6□□□□□ -1.03
HDAC6-202ENST00000376610 Q5W150 140 aa8.56□□□□□ -1.04
HDAC6-202ENST00000376610 H3BT86 120 aa8.54□□□□□ -1.04
HDAC6-202ENST00000376610 CASC2Q6XLA1 102 aa8.53□□□□□ -1.04
HDAC6-202ENST00000376610 HCG22E2RYF7 251 aa8.52□□□□□ -1.05
HDAC6-202ENST00000376610 TSTD3H0UI37 97 aa8.52□□□□□ -1.05
HDAC6-202ENST00000376610 C4orf26Q17RF5 130 aa8.52□□□□□ -1.05
HDAC6-202ENST00000376610 FAM236AA0A1B0GUQ0 79 aa8.51□□□□□ -1.05
HDAC6-202ENST00000376610 FAM236BA0A1B0GV22 79 aa8.51□□□□□ -1.05
HDAC6-202ENST00000376610 BATFQ16520 125 aa8.51□□□□□ -1.05
HDAC6-202ENST00000376610 CXCL6P80162 114 aa8.49□□□□□ -1.05
HDAC6-202ENST00000376610 Q8N9L7 120 aa8.48□□□□□ -1.05
HDAC6-202ENST00000376610 C5orf47Q569G3 176 aa8.47□□□□□ -1.05
HDAC6-202ENST00000376610 SMIM6P0DI80 62 aa8.45□□□□□ -1.06
HDAC6-202ENST00000376610 C9orf118A6NHY6 69 aa8.43□□□□□ -1.06
HDAC6-202ENST00000376610 A6NN06 94 aa8.42□□□□□ -1.06
HDAC6-202ENST00000376610 NEBP20929 6669 aa8.42□□□□□ -1.06
HDAC6-202ENST00000376610 A0A1W2PPM0 123 aa8.41□□□□□ -1.06
HDAC6-202ENST00000376610 S4R3F8 94 aa8.41□□□□□ -1.06
HDAC6-202ENST00000376610 CSAG1Q6PB30 78 aa8.4□□□□□ -1.06
HDAC6-202ENST00000376610 Q5VV11 94 aa8.39□□□□□ -1.07
HDAC6-202ENST00000376610 TAX1BP3O14907 124 aa8.35□□□□□ -1.07
HDAC6-202ENST00000376610 C1orf64Q8NEQ6 169 aa8.34□□□□□ -1.07
HDAC6-202ENST00000376610 UBL5Q9BZL1 73 aa8.34□□□□□ -1.07
HDAC6-202ENST00000376610 MUC12Q9UKN1 5478 aa8.33□□□□□ -1.08
HDAC6-202ENST00000376610 MT1BP07438 61 aa8.32□□□□□ -1.08
HDAC6-202ENST00000376610 KRTAP3-1Q9BYR8 98 aa8.32□□□□□ -1.08
HDAC6-202ENST00000376610 LCA10Q71F78 164 aa8.31□□□□□ -1.08
HDAC6-202ENST00000376610 SPRR2GQ9BYE4 73 aa8.31□□□□□ -1.08
HDAC6-202ENST00000376610 SPCS1Q9Y6A9 102 aa8.29□□□□□ -1.08
HDAC6-202ENST00000376610 KRTAP19-8Q3LI54 63 aa8.28□□□□□ -1.08
HDAC6-202ENST00000376610 TP53AIP1Q9HCN2 124 aa8.26□□□□□ -1.09
HDAC6-202ENST00000376610 KLKP1Q107X0 134 aa8.24□□□□□ -1.09
HDAC6-202ENST00000376610 SMCPP49901 116 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-202ENST00000376610 KRTAP10-5P60370 271 aa8.22□□□□□ -1.09
HDAC6-202ENST00000376610 IMUPQ9GZP8 106 aa8.17□□□□□ -1.1
HDAC6-202ENST00000376610 CRIPTQ9P021 101 aa8.15□□□□□ -1.1
HDAC6-202ENST00000376610 KRTAP20-1Q3LI63 56 aa8.13□□□□□ -1.11
HDAC6-202ENST00000376610 PRO0461Q9UI25 63 aa8.11□□□□□ -1.11
HDAC6-202ENST00000376610 KRTAP3-3Q9BYR6 98 aa8.1□□□□□ -1.11
HDAC6-202ENST00000376610 KRTAP5-9P26371 169 aa8.09□□□□□ -1.11
HDAC6-202ENST00000376610 CYP4F30PQ9H0H9 118 aa8.09□□□□□ -1.11
HDAC6-202ENST00000376610 K7EP34 96 aa8.07□□□□□ -1.12
HDAC6-202ENST00000376610 KMT2DO14686 5537 aa8.07□□□□□ -1.12
HDAC6-202ENST00000376610 COL5A1-AS1Q5SY13 56 aa8.07□□□□□ -1.12
HDAC6-202ENST00000376610 MDN1Q9NU22 5596 aa8.06□□□□□ -1.12
HDAC6-202ENST00000376610 LOC101927531A0A1B0GV80 90 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms