RNA–Protein interactions for RNA: ENST00000372638.3

CITED4-201, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4, humanhuman

APPRIS P1 BASIC

Gene CITED4, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4-201ENST00000372638 J3KT08 172 aa12.39□□□□□ -0.43
CITED4-201ENST00000372638 KRTAP19-2Q3LHN2 52 aa12.37□□□□□ -0.43
CITED4-201ENST00000372638 COL5A1-AS1Q5SY13 56 aa12.37□□□□□ -0.43
CITED4-201ENST00000372638 LCE2CQ5TA81 110 aa12.37□□□□□ -0.43
CITED4-201ENST00000372638 NOTCH2NLQ7Z3S9 236 aa12.37□□□□□ -0.43
CITED4-201ENST00000372638 MTURNQ8N3F0 131 aa12.37□□□□□ -0.43
CITED4-201ENST00000372638 SPCS1Q9Y6A9 102 aa12.37□□□□□ -0.43
CITED4-201ENST00000372638 A0A1B0GVX0 72 aa12.35□□□□□ -0.43
CITED4-201ENST00000372638 KRTAP16-1A8MUX0 517 aa12.35□□□□□ -0.43
CITED4-201ENST00000372638 C8orf87E5RJ46 101 aa12.34□□□□□ -0.43
CITED4-201ENST00000372638 NDUFB1O75438 58 aa12.3□□□□□ -0.44
CITED4-201ENST00000372638 NREPQ16612 68 aa12.27□□□□□ -0.45
CITED4-201ENST00000372638 COX6B2Q6YFQ2 88 aa12.24□□□□□ -0.45
CITED4-201ENST00000372638 PCP4L1A6NKN8 68 aa12.23□□□□□ -0.45
CITED4-201ENST00000372638 A8MWP4 228 aa12.23□□□□□ -0.45
CITED4-201ENST00000372638 MT1HP80294 61 aa12.2□□□□□ -0.46
CITED4-201ENST00000372638 K7EP34 96 aa12.19□□□□□ -0.46
CITED4-201ENST00000372638 SMCPP49901 116 aaPredicted RBP12.19□□□□□ -0.46
CITED4-201ENST00000372638 IGKV3D-7A0A0C4DH55 119 aa12.17□□□□□ -0.46
CITED4-201ENST00000372638 C8orf17Q9NRJ1 99 aa12.15□□□□□ -0.46
CITED4-201ENST00000372638 PRO0461Q9UI25 63 aa12.14□□□□□ -0.47
CITED4-201ENST00000372638 PRR15Q8IV56 129 aa12.13□□□□□ -0.47
CITED4-201ENST00000372638 GTF2H5Q6ZYL4 71 aa12.11□□□□□ -0.47
CITED4-201ENST00000372638 Q8N9P0 234 aaPredicted RBP12.1□□□□□ -0.47
CITED4-201ENST00000372638 BPY2O14599 106 aa12.06□□□□□ -0.48
CITED4-201ENST00000372638 Q6ZVQ6 151 aa12.06□□□□□ -0.48
CITED4-201ENST00000372638 ZCCHC13Q8WW36 166 aaKnown RBP12.06□□□□□ -0.48
CITED4-201ENST00000372638 M0R2T5 61 aa12.04□□□□□ -0.48
CITED4-201ENST00000372638 LCE2DQ5TA82 110 aaPredicted RBP12.04□□□□□ -0.48
CITED4-201ENST00000372638 K7EQZ3 153 aa12.02□□□□□ -0.49
CITED4-201ENST00000372638 MMP24-AS1A0A0U1RRL7 71 aa12.01□□□□□ -0.49
CITED4-201ENST00000372638 CRCT1Q9UGL9 99 aa12□□□□□ -0.49
CITED4-201ENST00000372638 F8W1H4 67 aa11.99□□□□□ -0.49
CITED4-201ENST00000372638 TMEM254Q8TBM7 123 aa11.99□□□□□ -0.49
CITED4-201ENST00000372638 MRPL34Q9BQ48 92 aaKnown RBP11.97□□□□□ -0.49
CITED4-201ENST00000372638 hDV103S1A0JD37 113 aa11.95□□□□□ -0.5
CITED4-201ENST00000372638 HRES1P13985 223 aa11.95□□□□□ -0.5
CITED4-201ENST00000372638 UBL5Q9BZL1 73 aa11.94□□□□□ -0.5
CITED4-201ENST00000372638 LINC00846Q9NV44 126 aa11.94□□□□□ -0.5
CITED4-201ENST00000372638 KRTAP10-6P60371 365 aaPredicted RBP11.93□□□□□ -0.5
CITED4-201ENST00000372638 RBM12B-AS1Q9P1G2 102 aa11.93□□□□□ -0.5
CITED4-201ENST00000372638 FAM236DA0A1B0GTK5 79 aa11.91□□□□□ -0.5
CITED4-201ENST00000372638 FAM236CP0DP71 79 aa11.91□□□□□ -0.5
CITED4-201ENST00000372638 LORP23490 312 aaPredicted RBP11.91□□□□□ -0.5
CITED4-201ENST00000372638 SPINK7P58062 85 aa11.91□□□□□ -0.5
CITED4-201ENST00000372638 MPLKIPQ8TAP9 179 aa11.91□□□□□ -0.5
CITED4-201ENST00000372638 ETDBQ3ZM63 59 aa11.89□□□□□ -0.51
CITED4-201ENST00000372638 FLGP20930 4061 aaPredicted RBP11.89□□□□□ -0.51
CITED4-201ENST00000372638 Q8N9L7 120 aa11.88□□□□□ -0.51
CITED4-201ENST00000372638 NDUFS5O43920 106 aa11.86□□□□□ -0.51
CITED4-201ENST00000372638 CASC2Q6XLA1 102 aa11.83□□□□□ -0.52
CITED4-201ENST00000372638 WFDC13Q8IUB5 93 aa11.83□□□□□ -0.52
CITED4-201ENST00000372638 FSIP2Q5CZC0 6907 aa11.79□□□□□ -0.52
CITED4-201ENST00000372638 HCG22E2RYF7 251 aa11.73□□□□□ -0.53
CITED4-201ENST00000372638 CXCL6P80162 114 aa11.7□□□□□ -0.54
CITED4-201ENST00000372638 Q5W150 140 aa11.69□□□□□ -0.54
CITED4-201ENST00000372638 ACYP1P07311 99 aa11.65□□□□□ -0.54
CITED4-201ENST00000372638 IGKV2D-30A0A075B6S6 120 aa11.63□□□□□ -0.55
CITED4-201ENST00000372638 IGKV2-30P06310 120 aa11.63□□□□□ -0.55
CITED4-201ENST00000372638 C7orf65Q6ZTY9 151 aa11.6□□□□□ -0.55
CITED4-201ENST00000372638 FAM240AA0A1B0GVK7 77 aa11.59□□□□□ -0.55
CITED4-201ENST00000372638 KRTAP9-8Q9BYQ0 159 aa11.59□□□□□ -0.55
CITED4-201ENST00000372638 A0A1B0GV90 55 aa11.56□□□□□ -0.56
CITED4-201ENST00000372638 TP53AIP1Q9HCN2 124 aa11.52□□□□□ -0.57
CITED4-201ENST00000372638 ATP5EP2Q5VTU8 51 aa11.48□□□□□ -0.57
CITED4-201ENST00000372638 H1FX-AS1Q4G0G2 97 aa11.47□□□□□ -0.57
CITED4-201ENST00000372638 MT2AP02795 61 aa11.44□□□□□ -0.58
CITED4-201ENST00000372638 HIST1H4AP62805 103 aaKnown RBP11.39□□□□□ -0.59
CITED4-201ENST00000372638 C4orf26Q17RF5 130 aa11.39□□□□□ -0.59
CITED4-201ENST00000372638 LINC00643Q86TS7 51 aa11.37□□□□□ -0.59
CITED4-201ENST00000372638 MT1FP04733 61 aa11.35□□□□□ -0.59
CITED4-201ENST00000372638 KRTAP10-10P60014 251 aa11.35□□□□□ -0.59
CITED4-201ENST00000372638 TRAV22A0A0B4J277 110 aa11.27□□□□□ -0.61
CITED4-201ENST00000372638 J3QR89 54 aa11.26□□□□□ -0.61
CITED4-201ENST00000372638 A0A087WVE0 104 aa11.23□□□□□ -0.61
CITED4-201ENST00000372638 C1orf64Q8NEQ6 169 aa11.23□□□□□ -0.61
CITED4-201ENST00000372638 CYP4F30PQ9H0H9 118 aa11.23□□□□□ -0.61
CITED4-201ENST00000372638 UQCRQO14949 82 aa11.22□□□□□ -0.61
CITED4-201ENST00000372638 KRTAP3-1Q9BYR8 98 aa11.22□□□□□ -0.61
CITED4-201ENST00000372638 KRTAP9-3Q9BYQ3 159 aa11.21□□□□□ -0.61
CITED4-201ENST00000372638 LOC101927531A0A1B0GV80 90 aa11.2□□□□□ -0.62
CITED4-201ENST00000372638 KRTAP9-7A8MTY7 169 aa11.2□□□□□ -0.62
CITED4-201ENST00000372638 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.17□□□□□ -0.62
CITED4-201ENST00000372638 H0Y9P7 68 aa11.13□□□□□ -0.63
CITED4-201ENST00000372638 ATOX1O00244 68 aa11.13□□□□□ -0.63
CITED4-201ENST00000372638 S4R3F8 94 aa11.11□□□□□ -0.63
CITED4-201ENST00000372638 LCE2BO14633 110 aa11.1□□□□□ -0.63
CITED4-201ENST00000372638 C5orf47Q569G3 176 aa11.08□□□□□ -0.64
CITED4-201ENST00000372638 CSAG1Q6PB30 78 aa11.03□□□□□ -0.64
CITED4-201ENST00000372638 LCA10Q71F78 164 aa11.03□□□□□ -0.64
CITED4-201ENST00000372638 OCR1Q9BZK8 76 aa11.03□□□□□ -0.64
CITED4-201ENST00000372638 USH2AO75445 5202 aa11□□□□□ -0.65
CITED4-201ENST00000372638 LINC00208Q96KT6 92 aa10.99□□□□□ -0.65
CITED4-201ENST00000372638 MP68P56378 58 aa10.98□□□□□ -0.65
CITED4-201ENST00000372638 K7ERU9 68 aa10.92□□□□□ -0.66
CITED4-201ENST00000372638 SCGB1A1P11684 91 aa10.91□□□□□ -0.66
CITED4-201ENST00000372638 FAM236AA0A1B0GUQ0 79 aa10.88□□□□□ -0.67
CITED4-201ENST00000372638 FAM236BA0A1B0GV22 79 aa10.88□□□□□ -0.67
CITED4-201ENST00000372638 KRTAP3-3Q9BYR6 98 aa10.88□□□□□ -0.67
CITED4-201ENST00000372638 IMUPQ9GZP8 106 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms