RNA–Protein interactions for RNA: ENST00000369937.4

CUEDC2-201, Transcript of CUE domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC2, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-201ENST00000369937 J3KT08 172 aa10.33□□□□□ -0.76
CUEDC2-201ENST00000369937 M0R143 59 aa10.31□□□□□ -0.76
CUEDC2-201ENST00000369937 ATXN8Q156A1 80 aa10.29□□□□□ -0.76
CUEDC2-201ENST00000369937 NDUFB1O75438 58 aa10.28□□□□□ -0.76
CUEDC2-201ENST00000369937 JMJD7-PLA2G4BH0Y9G9 81 aa10.27□□□□□ -0.77
CUEDC2-201ENST00000369937 Q6ZQT0 140 aa10.26□□□□□ -0.77
CUEDC2-201ENST00000369937 HRES1P13985 223 aa10.23□□□□□ -0.77
CUEDC2-201ENST00000369937 NAA38Q9BRA0 125 aaKnown RBP10.23□□□□□ -0.77
CUEDC2-201ENST00000369937 MTURNQ8N3F0 131 aa10.22□□□□□ -0.77
CUEDC2-201ENST00000369937 KRTAP9-8Q9BYQ0 159 aa10.22□□□□□ -0.77
CUEDC2-201ENST00000369937 A0A1B0GW54 56 aa10.21□□□□□ -0.77
CUEDC2-201ENST00000369937 ZCCHC13Q8WW36 166 aaKnown RBP10.21□□□□□ -0.77
CUEDC2-201ENST00000369937 PDE6GP18545 87 aa10.2□□□□□ -0.78
CUEDC2-201ENST00000369937 MPLKIPQ8TAP9 179 aa10.2□□□□□ -0.78
CUEDC2-201ENST00000369937 LOC110117498A0A087WWA1 95 aa10.18□□□□□ -0.78
CUEDC2-201ENST00000369937 LYRM7Q5U5X0 104 aa10.18□□□□□ -0.78
CUEDC2-201ENST00000369937 A8MWP4 228 aa10.15□□□□□ -0.78
CUEDC2-201ENST00000369937 SPINK7P58062 85 aa10.14□□□□□ -0.79
CUEDC2-201ENST00000369937 C14orf132Q9NPU4 83 aa10.13□□□□□ -0.79
CUEDC2-201ENST00000369937 C8orf17Q9NRJ1 99 aa10.13□□□□□ -0.79
CUEDC2-201ENST00000369937 Q8N9P0 234 aaPredicted RBP10.12□□□□□ -0.79
CUEDC2-201ENST00000369937 SMIM6P0DI80 62 aa10.11□□□□□ -0.79
CUEDC2-201ENST00000369937 NREPQ16612 68 aa10.1□□□□□ -0.79
CUEDC2-201ENST00000369937 IGKV3D-7A0A0C4DH55 119 aa10.08□□□□□ -0.8
CUEDC2-201ENST00000369937 MT2AP02795 61 aa10.08□□□□□ -0.8
CUEDC2-201ENST00000369937 BATFQ16520 125 aa10.08□□□□□ -0.8
CUEDC2-201ENST00000369937 TSTD3H0UI37 97 aa10.07□□□□□ -0.8
CUEDC2-201ENST00000369937 Q6ZVQ6 151 aa10.06□□□□□ -0.8
CUEDC2-201ENST00000369937 KRTAP10-10P60014 251 aa10.04□□□□□ -0.8
CUEDC2-201ENST00000369937 PRR15Q8IV56 129 aa10.04□□□□□ -0.8
CUEDC2-201ENST00000369937 USH2AO75445 5202 aa10.04□□□□□ -0.8
CUEDC2-201ENST00000369937 WFDC13Q8IUB5 93 aa10.01□□□□□ -0.81
CUEDC2-201ENST00000369937 MT1FP04733 61 aa10□□□□□ -0.81
CUEDC2-201ENST00000369937 TMEM254Q8TBM7 123 aa9.97□□□□□ -0.81
CUEDC2-201ENST00000369937 MRPL34Q9BQ48 92 aaKnown RBP9.97□□□□□ -0.81
CUEDC2-201ENST00000369937 H3BT86 120 aa9.96□□□□□ -0.82
CUEDC2-201ENST00000369937 NDUFS5O43920 106 aa9.95□□□□□ -0.82
CUEDC2-201ENST00000369937 MMP24-AS1A0A0U1RRL7 71 aa9.94□□□□□ -0.82
CUEDC2-201ENST00000369937 C9orf118A6NHY6 69 aa9.94□□□□□ -0.82
CUEDC2-201ENST00000369937 SSPOA2VEC9 5147 aa9.94□□□□□ -0.82
CUEDC2-201ENST00000369937 hDV103S1A0JD37 113 aa9.93□□□□□ -0.82
CUEDC2-201ENST00000369937 A0A1W2PPM0 123 aa9.91□□□□□ -0.82
CUEDC2-201ENST00000369937 K7EQZ3 153 aa9.91□□□□□ -0.82
CUEDC2-201ENST00000369937 BPY2O14599 106 aa9.9□□□□□ -0.82
CUEDC2-201ENST00000369937 KRTAP9-3Q9BYQ3 159 aa9.9□□□□□ -0.82
CUEDC2-201ENST00000369937 LCE2BO14633 110 aa9.87□□□□□ -0.83
CUEDC2-201ENST00000369937 TAX1BP3O14907 124 aa9.87□□□□□ -0.83
CUEDC2-201ENST00000369937 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.84□□□□□ -0.83
CUEDC2-201ENST00000369937 IGKV2D-30A0A075B6S6 120 aa9.8□□□□□ -0.84
CUEDC2-201ENST00000369937 IGKV2-30P06310 120 aa9.8□□□□□ -0.84
CUEDC2-201ENST00000369937 H1FX-AS1Q4G0G2 97 aa9.8□□□□□ -0.84
CUEDC2-201ENST00000369937 KRTAP19-1Q8IUB9 90 aa9.78□□□□□ -0.84
CUEDC2-201ENST00000369937 SPCS1Q9Y6A9 102 aa9.78□□□□□ -0.84
CUEDC2-201ENST00000369937 KRTAP9-7A8MTY7 169 aa9.77□□□□□ -0.85
CUEDC2-201ENST00000369937 CASC2Q6XLA1 102 aa9.77□□□□□ -0.85
CUEDC2-201ENST00000369937 C7orf65Q6ZTY9 151 aa9.77□□□□□ -0.85
CUEDC2-201ENST00000369937 LOC105371267A0A1B0GV96 52 aa9.75□□□□□ -0.85
CUEDC2-201ENST00000369937 Q8N9L7 120 aa9.75□□□□□ -0.85
CUEDC2-201ENST00000369937 LINC00846Q9NV44 126 aa9.74□□□□□ -0.85
CUEDC2-201ENST00000369937 FCGBPQ9Y6R7 5405 aaPredicted RBP9.73□□□□□ -0.85
CUEDC2-201ENST00000369937 HCG22E2RYF7 251 aa9.73□□□□□ -0.85
CUEDC2-201ENST00000369937 Q5W150 140 aa9.72□□□□□ -0.85
CUEDC2-201ENST00000369937 UBL5Q9BZL1 73 aa9.69□□□□□ -0.86
CUEDC2-201ENST00000369937 CXCL6P80162 114 aa9.67□□□□□ -0.86
CUEDC2-201ENST00000369937 SMCPP49901 116 aaPredicted RBP9.65□□□□□ -0.86
CUEDC2-201ENST00000369937 COL5A1-AS1Q5SY13 56 aa9.64□□□□□ -0.87
CUEDC2-201ENST00000369937 C4orf26Q17RF5 130 aa9.61□□□□□ -0.87
CUEDC2-201ENST00000369937 K7EP34 96 aa9.57□□□□□ -0.88
CUEDC2-201ENST00000369937 KRTAP19-6Q3LI70 58 aa9.57□□□□□ -0.88
CUEDC2-201ENST00000369937 PRO0461Q9UI25 63 aa9.55□□□□□ -0.88
CUEDC2-201ENST00000369937 MACF1Q9UPN3 7388 aaKnown RBP9.5□□□□□ -0.89
CUEDC2-201ENST00000369937 GTF2H5Q6ZYL4 71 aa9.49□□□□□ -0.89
CUEDC2-201ENST00000369937 C5orf47Q569G3 176 aa9.48□□□□□ -0.89
CUEDC2-201ENST00000369937 TP53AIP1Q9HCN2 124 aa9.47□□□□□ -0.89
CUEDC2-201ENST00000369937 FAM236AA0A1B0GUQ0 79 aa9.45□□□□□ -0.9
CUEDC2-201ENST00000369937 FAM236BA0A1B0GV22 79 aa9.45□□□□□ -0.9
CUEDC2-201ENST00000369937 SYNE2Q8WXH0 6885 aaKnown RBP9.44□□□□□ -0.9
CUEDC2-201ENST00000369937 C1orf64Q8NEQ6 169 aa9.44□□□□□ -0.9
CUEDC2-201ENST00000369937 S4R3F8 94 aa9.44□□□□□ -0.9
CUEDC2-201ENST00000369937 F8W1H4 67 aa9.42□□□□□ -0.9
CUEDC2-201ENST00000369937 CSAG1Q6PB30 78 aa9.4□□□□□ -0.9
CUEDC2-201ENST00000369937 KRTAP3-1Q9BYR8 98 aa9.39□□□□□ -0.91
CUEDC2-201ENST00000369937 ETDBQ3ZM63 59 aa9.37□□□□□ -0.91
CUEDC2-201ENST00000369937 LCA10Q71F78 164 aa9.34□□□□□ -0.91
CUEDC2-201ENST00000369937 PCP4L1A6NKN8 68 aa9.31□□□□□ -0.92
CUEDC2-201ENST00000369937 CYP4F30PQ9H0H9 118 aa9.25□□□□□ -0.93
CUEDC2-201ENST00000369937 TRAV22A0A0B4J277 110 aa9.24□□□□□ -0.93
CUEDC2-201ENST00000369937 ACYP1P07311 99 aa9.23□□□□□ -0.93
CUEDC2-201ENST00000369937 Q5VV11 94 aa9.23□□□□□ -0.93
CUEDC2-201ENST00000369937 LOC101927531A0A1B0GV80 90 aa9.22□□□□□ -0.93
CUEDC2-201ENST00000369937 A6NN06 94 aa9.18□□□□□ -0.94
CUEDC2-201ENST00000369937 KRTAP6-3Q3LI67 103 aa9.18□□□□□ -0.94
CUEDC2-201ENST00000369937 HIST1H4AP62805 103 aaKnown RBP9.17□□□□□ -0.94
CUEDC2-201ENST00000369937 KLKP1Q107X0 134 aa9.17□□□□□ -0.94
CUEDC2-201ENST00000369937 SPRR2GQ9BYE4 73 aa9.17□□□□□ -0.94
CUEDC2-201ENST00000369937 ATP5EP2Q5VTU8 51 aa9.16□□□□□ -0.94
CUEDC2-201ENST00000369937 MT1BP07438 61 aa9.13□□□□□ -0.95
CUEDC2-201ENST00000369937 KRTAP3-3Q9BYR6 98 aa9.13□□□□□ -0.95
CUEDC2-201ENST00000369937 FAM240AA0A1B0GVK7 77 aa9.12□□□□□ -0.95
CUEDC2-201ENST00000369937 UQCRQO14949 82 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms