RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 H0Y9J4 135 aa4.07□□□□□ -1.76
ECHDC1-202ENST00000368289 OXTP01178 125 aa4.07□□□□□ -1.76
ECHDC1-202ENST00000368289 CNBPP62633 177 aaKnown RBP4.07□□□□□ -1.76
ECHDC1-202ENST00000368289 Q8NBF4 154 aa4.07□□□□□ -1.76
ECHDC1-202ENST00000368289 LINC00588Q9Y4M8 146 aa4.07□□□□□ -1.76
ECHDC1-202ENST00000368289 IGLV8-61A0A075B6I0 122 aa4.06□□□□□ -1.76
ECHDC1-202ENST00000368289 IGLV9-49A0A0B4J1Y8 123 aa4.06□□□□□ -1.76
ECHDC1-202ENST00000368289 F8WEM9 126 aa4.06□□□□□ -1.76
ECHDC1-202ENST00000368289 H7BZZ5 65 aa4.06□□□□□ -1.76
ECHDC1-202ENST00000368289 CD164Q04900 197 aa4.06□□□□□ -1.76
ECHDC1-202ENST00000368289 C1orf137Q5JT78 98 aa4.06□□□□□ -1.76
ECHDC1-202ENST00000368289 REG3GQ6UW15 175 aa4.06□□□□□ -1.76
ECHDC1-202ENST00000368289 FAM19A5Q7Z5A7 132 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-202ENST00000368289 NBDYA0A0U1RRE5 68 aa4.05□□□□□ -1.76
ECHDC1-202ENST00000368289 IGKV4-1P06312 121 aa4.05□□□□□ -1.76
ECHDC1-202ENST00000368289 LINC00474Q9P2X8 69 aa4.05□□□□□ -1.76
ECHDC1-202ENST00000368289 TMEM254Q8TBM7 123 aa4.04□□□□□ -1.76
ECHDC1-202ENST00000368289 OCR1Q9BZK8 76 aa4.04□□□□□ -1.76
ECHDC1-202ENST00000368289 SMIM26A0A096LP01 95 aa4.03□□□□□ -1.76
ECHDC1-202ENST00000368289 Q9BRP9 147 aa4.03□□□□□ -1.76
ECHDC1-202ENST00000368289 A0A0U1RQV1 116 aa4.02□□□□□ -1.77
ECHDC1-202ENST00000368289 A0A1W2PNM2 257 aa4.02□□□□□ -1.77
ECHDC1-202ENST00000368289 SPRR1BP22528 89 aa4.02□□□□□ -1.77
ECHDC1-202ENST00000368289 RPL37AP61513 92 aaKnown RBP4.02□□□□□ -1.77
ECHDC1-202ENST00000368289 UBE2BP63146 152 aa4.02□□□□□ -1.77
ECHDC1-202ENST00000368289 DEFB105AQ8NG35 78 aa4.02□□□□□ -1.77
ECHDC1-202ENST00000368289 CYSTM1Q9H1C7 97 aa4.02□□□□□ -1.77
ECHDC1-202ENST00000368289 PRO0628Q9UI54 55 aa4.02□□□□□ -1.77
ECHDC1-202ENST00000368289 H3BPC8 53 aa4.01□□□□□ -1.77
ECHDC1-202ENST00000368289 NDUFB1O75438 58 aa4.01□□□□□ -1.77
ECHDC1-202ENST00000368289 Q6ZRN7 208 aaPredicted RBP4.01□□□□□ -1.77
ECHDC1-202ENST00000368289 UBE2DNLQ8IWF7 75 aa4.01□□□□□ -1.77
ECHDC1-202ENST00000368289 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
ECHDC1-202ENST00000368289 PSCAO43653 123 aa4□□□□□ -1.77
ECHDC1-202ENST00000368289 C4orf26Q17RF5 130 aa4□□□□□ -1.77
ECHDC1-202ENST00000368289 SSPOA2VEC9 5147 aa3.99□□□□□ -1.77
ECHDC1-202ENST00000368289 SCXQ7RTU7 201 aa3.99□□□□□ -1.77
ECHDC1-202ENST00000368289 KRTAP7-1Q8IUC3 87 aa3.99□□□□□ -1.77
ECHDC1-202ENST00000368289 FAM168BA1KXE4 195 aa3.98□□□□□ -1.77
ECHDC1-202ENST00000368289 C9orf163Q8N9P6 203 aa3.98□□□□□ -1.77
ECHDC1-202ENST00000368289 HCG22E2RYF7 251 aa3.97□□□□□ -1.77
ECHDC1-202ENST00000368289 DSCR10P59022 87 aa3.97□□□□□ -1.77
ECHDC1-202ENST00000368289 SNURFQ9Y675 71 aa3.97□□□□□ -1.77
ECHDC1-202ENST00000368289 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-202ENST00000368289 MUC17Q685J3 4493 aa3.97□□□□□ -1.77
ECHDC1-202ENST00000368289 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-202ENST00000368289 A0A096LNI7 61 aa3.96□□□□□ -1.78
ECHDC1-202ENST00000368289 UBE2AP49459 152 aa3.96□□□□□ -1.78
ECHDC1-202ENST00000368289 MP68P56378 58 aa3.96□□□□□ -1.78
ECHDC1-202ENST00000368289 C1orf195Q5TG92 126 aa3.96□□□□□ -1.78
ECHDC1-202ENST00000368289 Q5XG85 94 aa3.96□□□□□ -1.78
ECHDC1-202ENST00000368289 IGFL1Q6UW32 110 aa3.96□□□□□ -1.78
ECHDC1-202ENST00000368289 ST20-AS1Q8NBB2 130 aa3.96□□□□□ -1.78
ECHDC1-202ENST00000368289 ZCCHC13Q8WW36 166 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-202ENST00000368289 USH2AO75445 5202 aa3.94□□□□□ -1.78
ECHDC1-202ENST00000368289 hDV103S1A0JD37 113 aa3.94□□□□□ -1.78
ECHDC1-202ENST00000368289 CYP4F30PQ9H0H9 118 aa3.94□□□□□ -1.78
ECHDC1-202ENST00000368289 ZNF706Q9Y5V0 76 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-202ENST00000368289 A0A1W2PNN7 141 aa3.93□□□□□ -1.78
ECHDC1-202ENST00000368289 NOTCH2NLQ7Z3S9 236 aa3.93□□□□□ -1.78
ECHDC1-202ENST00000368289 Q8N9L7 120 aa3.93□□□□□ -1.78
ECHDC1-202ENST00000368289 SPANXA2-OT1Q8N9U9 137 aa3.93□□□□□ -1.78
ECHDC1-202ENST00000368289 LRCOL1A6NCL2 159 aa3.92□□□□□ -1.78
ECHDC1-202ENST00000368289 A8MWP4 228 aa3.92□□□□□ -1.78
ECHDC1-202ENST00000368289 K7EQZ3 153 aa3.92□□□□□ -1.78
ECHDC1-202ENST00000368289 PRR15Q8IV56 129 aa3.92□□□□□ -1.78
ECHDC1-202ENST00000368289 HIGD2AQ9BW72 106 aa3.92□□□□□ -1.78
ECHDC1-202ENST00000368289 TP53AIP1Q9HCN2 124 aa3.92□□□□□ -1.78
ECHDC1-202ENST00000368289 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-202ENST00000368289 A0A087WSZ3 146 aa3.91□□□□□ -1.78
ECHDC1-202ENST00000368289 IGKV2-24A0A0C4DH68 120 aa3.91□□□□□ -1.78
ECHDC1-202ENST00000368289 PRLHP81277 87 aa3.91□□□□□ -1.78
ECHDC1-202ENST00000368289 LINC00472Q9H8W2 130 aa3.91□□□□□ -1.78
ECHDC1-202ENST00000368289 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-202ENST00000368289 A0A087WTM6 91 aa3.9□□□□□ -1.79
ECHDC1-202ENST00000368289 LINC00483Q53H64 154 aa3.9□□□□□ -1.79
ECHDC1-202ENST00000368289 Q6ZSA8 131 aa3.9□□□□□ -1.79
ECHDC1-202ENST00000368289 KRTAP13-1Q8IUC0 172 aa3.9□□□□□ -1.79
ECHDC1-202ENST00000368289 PRAC1Q96KF2 57 aa3.9□□□□□ -1.79
ECHDC1-202ENST00000368289 MOBPQ13875 183 aa3.89□□□□□ -1.79
ECHDC1-202ENST00000368289 Q1T7F1 81 aa3.89□□□□□ -1.79
ECHDC1-202ENST00000368289 CASC2Q6XLA1 102 aa3.89□□□□□ -1.79
ECHDC1-202ENST00000368289 FP248Q71RG6 208 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-202ENST00000368289 A0A087X002 238 aa3.88□□□□□ -1.79
ECHDC1-202ENST00000368289 HRCT1Q6UXD1 115 aa3.88□□□□□ -1.79
ECHDC1-202ENST00000368289 PHF5AQ7RTV0 110 aaKnown RBP3.88□□□□□ -1.79
ECHDC1-202ENST00000368289 SPACA4Q8TDM5 124 aa3.88□□□□□ -1.79
ECHDC1-202ENST00000368289 TRAV22A0A0B4J277 110 aa3.87□□□□□ -1.79
ECHDC1-202ENST00000368289 IGLV7-46A0A075B6I9 117 aa3.86□□□□□ -1.79
ECHDC1-202ENST00000368289 ASB16-AS1Q495Z4 193 aa3.86□□□□□ -1.79
ECHDC1-202ENST00000368289 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
ECHDC1-202ENST00000368289 H0Y9P7 68 aa3.85□□□□□ -1.79
ECHDC1-202ENST00000368289 C1orf64Q8NEQ6 169 aa3.85□□□□□ -1.79
ECHDC1-202ENST00000368289 PLAC8Q9NZF1 115 aa3.85□□□□□ -1.79
ECHDC1-202ENST00000368289 ZNF861PO60384 105 aa3.84□□□□□ -1.79
ECHDC1-202ENST00000368289 PMAIP1Q13794 54 aa3.84□□□□□ -1.79
ECHDC1-202ENST00000368289 WFDC13Q8IUB5 93 aa3.84□□□□□ -1.79
ECHDC1-202ENST00000368289 LINC00208Q96KT6 92 aa3.84□□□□□ -1.79
ECHDC1-202ENST00000368289 MMP24-AS1A0A0U1RRL7 71 aa3.83□□□□□ -1.8
ECHDC1-202ENST00000368289 CHTF8P0CG12 524 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms