RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 C8orf87E5RJ46 101 aa7.51□□□□□ -1.21
NSMCE1-201ENST00000361439 LINC00313P59037 77 aa7.51□□□□□ -1.21
NSMCE1-201ENST00000361439 ACYP1P07311 99 aa7.5□□□□□ -1.21
NSMCE1-201ENST00000361439 Q6ZVQ6 151 aa7.5□□□□□ -1.21
NSMCE1-201ENST00000361439 LINC00846Q9NV44 126 aa7.49□□□□□ -1.21
NSMCE1-201ENST00000361439 IGHV6-1A0A0B4J1U7 121 aa7.48□□□□□ -1.21
NSMCE1-201ENST00000361439 FAM240AA0A1B0GVK7 77 aa7.48□□□□□ -1.21
NSMCE1-201ENST00000361439 BPY2O14599 106 aa7.48□□□□□ -1.21
NSMCE1-201ENST00000361439 Q75L30 129 aa7.48□□□□□ -1.21
NSMCE1-201ENST00000361439 RPL37P61927 97 aaKnown RBP7.47□□□□□ -1.21
NSMCE1-201ENST00000361439 MUC17Q685J3 4493 aa7.46□□□□□ -1.21
NSMCE1-201ENST00000361439 DSCR10P59022 87 aa7.46□□□□□ -1.22
NSMCE1-201ENST00000361439 PRR15Q8IV56 129 aa7.46□□□□□ -1.22
NSMCE1-201ENST00000361439 C20orf166-AS1Q96NR2 134 aa7.46□□□□□ -1.22
NSMCE1-201ENST00000361439 KRTAP3-3Q9BYR6 98 aa7.46□□□□□ -1.22
NSMCE1-201ENST00000361439 KRTAP3-2Q9BYR7 98 aa7.46□□□□□ -1.22
NSMCE1-201ENST00000361439 IGKV3D-7A0A0C4DH55 119 aa7.45□□□□□ -1.22
NSMCE1-201ENST00000361439 A8MUU9 505 aa7.43□□□□□ -1.22
NSMCE1-201ENST00000361439 KRTAP16-1A8MUX0 517 aa7.42□□□□□ -1.22
NSMCE1-201ENST00000361439 NOTCH2NLQ7Z3S9 236 aa7.42□□□□□ -1.22
NSMCE1-201ENST00000361439 RNF213Q63HN8 5207 aa7.42□□□□□ -1.22
NSMCE1-201ENST00000361439 C8orf17Q9NRJ1 99 aa7.41□□□□□ -1.22
NSMCE1-201ENST00000361439 J3QR89 54 aa7.4□□□□□ -1.22
NSMCE1-201ENST00000361439 CXCL6P80162 114 aa7.4□□□□□ -1.22
NSMCE1-201ENST00000361439 ATP11AUNQ6ZP68 121 aa7.4□□□□□ -1.22
NSMCE1-201ENST00000361439 K7EQZ3 153 aa7.39□□□□□ -1.23
NSMCE1-201ENST00000361439 MUC2Q02817 5179 aa7.39□□□□□ -1.23
NSMCE1-201ENST00000361439 PCOTHQ58A44 107 aa7.38□□□□□ -1.23
NSMCE1-201ENST00000361439 ATP5EP2Q5VTU8 51 aa7.36□□□□□ -1.23
NSMCE1-201ENST00000361439 MMP24-AS1A0A0U1RRL7 71 aa7.35□□□□□ -1.23
NSMCE1-201ENST00000361439 Q8N9P0 234 aaPredicted RBP7.35□□□□□ -1.23
NSMCE1-201ENST00000361439 TMEM254Q8TBM7 123 aa7.35□□□□□ -1.23
NSMCE1-201ENST00000361439 hDV103S1A0JD37 113 aa7.34□□□□□ -1.23
NSMCE1-201ENST00000361439 MRPL34Q9BQ48 92 aaKnown RBP7.32□□□□□ -1.24
NSMCE1-201ENST00000361439 Q8N9L7 120 aa7.31□□□□□ -1.24
NSMCE1-201ENST00000361439 A0A0U1RQV1 116 aa7.3□□□□□ -1.24
NSMCE1-201ENST00000361439 LINC00643Q86TS7 51 aa7.3□□□□□ -1.24
NSMCE1-201ENST00000361439 HCG22E2RYF7 251 aa7.28□□□□□ -1.24
NSMCE1-201ENST00000361439 CASC2Q6XLA1 102 aa7.28□□□□□ -1.24
NSMCE1-201ENST00000361439 KRTAP4-1Q9BYQ7 146 aa7.28□□□□□ -1.24
NSMCE1-201ENST00000361439 K7ERU9 68 aa7.26□□□□□ -1.25
NSMCE1-201ENST00000361439 ZCCHC13Q8WW36 166 aaKnown RBP7.26□□□□□ -1.25
NSMCE1-201ENST00000361439 WFDC13Q8IUB5 93 aa7.24□□□□□ -1.25
NSMCE1-201ENST00000361439 NDUFS5O43920 106 aa7.21□□□□□ -1.26
NSMCE1-201ENST00000361439 HIST1H4AP62805 103 aaKnown RBP7.18□□□□□ -1.26
NSMCE1-201ENST00000361439 TP53AIP1Q9HCN2 124 aa7.17□□□□□ -1.26
NSMCE1-201ENST00000361439 SPINK7P58062 85 aa7.12□□□□□ -1.27
NSMCE1-201ENST00000361439 FAT4Q6V0I7 4981 aa7.11□□□□□ -1.27
NSMCE1-201ENST00000361439 IMUPQ9GZP8 106 aa7.11□□□□□ -1.27
NSMCE1-201ENST00000361439 KRTAP19-2Q3LHN2 52 aa7.1□□□□□ -1.27
NSMCE1-201ENST00000361439 Q5W150 140 aa7.1□□□□□ -1.27
NSMCE1-201ENST00000361439 A0A087WVE0 104 aa7.09□□□□□ -1.27
NSMCE1-201ENST00000361439 HRES1P13985 223 aa7.07□□□□□ -1.28
NSMCE1-201ENST00000361439 MPLKIPQ8TAP9 179 aa7.07□□□□□ -1.28
NSMCE1-201ENST00000361439 LCE2CQ5TA81 110 aa7.06□□□□□ -1.28
NSMCE1-201ENST00000361439 RBM12B-AS1Q9P1G2 102 aa7.06□□□□□ -1.28
NSMCE1-201ENST00000361439 COX6B2Q6YFQ2 88 aa7.05□□□□□ -1.28
NSMCE1-201ENST00000361439 C7orf65Q6ZTY9 151 aa7.05□□□□□ -1.28
NSMCE1-201ENST00000361439 UQCRQO14949 82 aa7.04□□□□□ -1.28
NSMCE1-201ENST00000361439 MT-ATP8P03928 68 aa7.02□□□□□ -1.29
NSMCE1-201ENST00000361439 LCE2AQ5TA79 106 aaPredicted RBP7.02□□□□□ -1.29
NSMCE1-201ENST00000361439 IGKV2D-30A0A075B6S6 120 aa7.01□□□□□ -1.29
NSMCE1-201ENST00000361439 TRAV22A0A0B4J277 110 aa7.01□□□□□ -1.29
NSMCE1-201ENST00000361439 IGKV2-30P06310 120 aa7.01□□□□□ -1.29
NSMCE1-201ENST00000361439 ATOX1O00244 68 aa6.99□□□□□ -1.29
NSMCE1-201ENST00000361439 SCGB1A1P11684 91 aa6.98□□□□□ -1.29
NSMCE1-201ENST00000361439 OCR1Q9BZK8 76 aa6.98□□□□□ -1.29
NSMCE1-201ENST00000361439 FAM236DA0A1B0GTK5 79 aa6.97□□□□□ -1.29
NSMCE1-201ENST00000361439 FAM236CP0DP71 79 aa6.97□□□□□ -1.29
NSMCE1-201ENST00000361439 LOC101927531A0A1B0GV80 90 aa6.96□□□□□ -1.3
NSMCE1-201ENST00000361439 FLGP20930 4061 aaPredicted RBP6.96□□□□□ -1.3
NSMCE1-201ENST00000361439 MT1HP80294 61 aa6.95□□□□□ -1.3
NSMCE1-201ENST00000361439 H0Y9P7 68 aa6.93□□□□□ -1.3
NSMCE1-201ENST00000361439 C5orf47Q569G3 176 aa6.93□□□□□ -1.3
NSMCE1-201ENST00000361439 SMIM20Q8N5G0 67 aa6.93□□□□□ -1.3
NSMCE1-201ENST00000361439 MP68P56378 58 aa6.92□□□□□ -1.3
NSMCE1-201ENST00000361439 CYP4F30PQ9H0H9 118 aa6.92□□□□□ -1.3
NSMCE1-201ENST00000361439 FAM236AA0A1B0GUQ0 79 aa6.9□□□□□ -1.3
NSMCE1-201ENST00000361439 FAM236BA0A1B0GV22 79 aa6.9□□□□□ -1.3
NSMCE1-201ENST00000361439 H3BPC8 53 aa6.9□□□□□ -1.3
NSMCE1-201ENST00000361439 C1orf64Q8NEQ6 169 aa6.88□□□□□ -1.31
NSMCE1-201ENST00000361439 M0R2T5 61 aa6.86□□□□□ -1.31
NSMCE1-201ENST00000361439 PCP4P48539 62 aa6.86□□□□□ -1.31
NSMCE1-201ENST00000361439 C4orf26Q17RF5 130 aa6.85□□□□□ -1.31
NSMCE1-201ENST00000361439 H1FX-AS1Q4G0G2 97 aa6.85□□□□□ -1.31
NSMCE1-201ENST00000361439 LINC00208Q96KT6 92 aa6.85□□□□□ -1.31
NSMCE1-201ENST00000361439 TRAV7A0A075B6U4 112 aa6.84□□□□□ -1.31
NSMCE1-201ENST00000361439 KRTAP10-6P60371 365 aaPredicted RBP6.77□□□□□ -1.33
NSMCE1-201ENST00000361439 LORP23490 312 aaPredicted RBP6.76□□□□□ -1.33
NSMCE1-201ENST00000361439 KRTAP3-1Q9BYR8 98 aa6.76□□□□□ -1.33
NSMCE1-201ENST00000361439 A8MUN3 132 aa6.74□□□□□ -1.33
NSMCE1-201ENST00000361439 SERP2Q8N6R1 65 aa6.74□□□□□ -1.33
NSMCE1-201ENST00000361439 KLKP1Q107X0 134 aa6.73□□□□□ -1.33
NSMCE1-201ENST00000361439 S4R3F8 94 aa6.68□□□□□ -1.34
NSMCE1-201ENST00000361439 KRTAP9-8Q9BYQ0 159 aa6.64□□□□□ -1.35
NSMCE1-201ENST00000361439 COX7CP15954 63 aa6.63□□□□□ -1.35
NSMCE1-201ENST00000361439 C20orf197Q8N268 126 aa6.63□□□□□ -1.35
NSMCE1-201ENST00000361439 LCA10Q71F78 164 aa6.62□□□□□ -1.35
NSMCE1-201ENST00000361439 DMAC1Q96GE9 116 aa6.62□□□□□ -1.35
NSMCE1-201ENST00000361439 ANAPC13Q9BS18 74 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms