RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 WT1-ASQ06250 92 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 DEFB113Q30KQ7 82 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 LINC00308Q8TCZ7 52 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 TMEM263Q8WUH6 116 aaKnown RBP0.79□□□□□ -2.28
BRCA1-202ENST00000354071 RETNLBQ9BQ08 111 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 PRO2289Q9P1D8 64 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 UBE2D4Q9Y2X8 147 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 DLG5Q8TDM6 1919 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 HCG22E2RYF7 251 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 LYNX1G3V0Z9 82 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 LYNX1P0DP58 116 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 PATE2Q6UY27 113 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 CCL19Q99731 98 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 KAAG1Q9UBP8 84 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 MCM3APO60318 1980 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 A0A096LNI7 61 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 TRBV10-3A0A0K0K1G6 114 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 A0A1B0GW54 56 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 hDV103S1A0JD37 113 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 H3BUX3 64 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 TET1Q8NFU7 2136 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 NOP10Q9NPE3 64 aaKnown RBP0.79□□□□□ -2.28
BRCA1-202ENST00000354071 IGLV3-32A0A0A0MS00 114 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 TRBV6-5A0A0K0K1A5 114 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 IGLV3-19P01714 112 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 MSMBP08118 114 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 C1orf134Q5TEV5 83 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 GDF5OSQ5U4N7 250 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 ATP11AUNQ6ZP68 121 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 ZNF833PQ6ZTB9 187 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 PRR15Q8IV56 129 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 CDKN2A-AS1Q9UH64 79 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 MUC4Q99102 2169 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 TRBV6-1A0A0K0K1D8 114 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 A0A1B0GU69 56 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 G3V318 75 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 UBE2D3P61077 147 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 PCOTHQ58A44 107 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 DEFB121Q5J5C9 76 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 LINC00311Q8N616 119 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 FAM167A-AS1Q96KT0 104 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 Q9BRP9 147 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 PTPRFP10586 1907 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 NUP210LQ5VU65 1888 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 CDK5RAP2Q96SN8 1893 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 BCE1O60756 84 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 C5orf56Q8N8D9 126 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 SMIM11BQ8TCY0 68 aa0.78□□□□□ -2.28
BRCA1-202ENST00000354071 H0Y9P7 68 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 OBSL1O75147 1896 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 IGLV1-51P01701 117 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 UBE2D1P51668 147 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 ROMO1P60602 79 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.77□□□□□ -2.29
BRCA1-202ENST00000354071 Q6ZRN7 208 aaPredicted RBP0.77□□□□□ -2.29
BRCA1-202ENST00000354071 C7orf65Q6ZTY9 151 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 SSBP3-AS1Q7Z2R9 100 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 CYP4F30PQ9H0H9 118 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 PROK2Q9HC23 129 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 KIAA1549Q9HCM3 1950 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 LPAP08519 4548 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 C5orf67F2Z3F1 127 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 SPINK1P00995 79 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 C9orf116Q5BN46 136 aaPredicted RBP0.77□□□□□ -2.29
BRCA1-202ENST00000354071 SPINK6Q6UWN8 80 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 LINC00322Q6ZN03 302 aaPredicted RBP0.77□□□□□ -2.29
BRCA1-202ENST00000354071 Q6ZTI0 123 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 Q8N814 137 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 ODF3Q96PU9 254 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 UBR2Q8IWV8 1755 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 MYOFQ9NZM1 2061 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 PTPRDP23468 1912 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 TRBV6-8A0A0A6YYG3 113 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 H3BUA1 57 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 I3L2K1 104 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 SPART-AS1P0CW21 52 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 CCL18P55774 89 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 KRTAP10-10P60014 251 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 LINC00575Q6W349 94 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 ANKRD36A6QL64 1941 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 MYLKQ15746 1914 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 ANKRD36CQ5JPF3 1778 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 LY6LH3BQJ8 138 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 K7EIM0 57 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 ACYP2P14621 99 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 C1orf137Q5JT78 98 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 SBSPONQ8IVN8 264 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 LINC00467Q9BRT7 94 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 PSORS1C2Q9UIG4 136 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 LAMA4Q16363 1823 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 USF3Q68DE3 2245 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 DOCK1Q14185 1865 aa0.77□□□□□ -2.29
BRCA1-202ENST00000354071 HRNRQ86YZ3 2850 aaPredicted RBP0.76□□□□□ -2.29
BRCA1-202ENST00000354071 COX17Q14061 63 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 CRIPTQ9P021 101 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 LINC00474Q9P2X8 69 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 PRO0255Q9UI72 69 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 TANC2Q9HCD6 1990 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 PCDH15Q96QU1 1955 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 NUP210Q8TEM1 1887 aaPredicted RBP0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms