RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 A0A1B0GVX0 72 aa8.26□□□□□ -1.09
TSPAN4-201ENST00000346501 A0A1W2PPM0 123 aa8.25□□□□□ -1.09
TSPAN4-201ENST00000346501 C14orf132Q9NPU4 83 aa8.25□□□□□ -1.09
TSPAN4-201ENST00000346501 H3BT86 120 aa8.24□□□□□ -1.09
TSPAN4-201ENST00000346501 LCE2CQ5TA81 110 aa8.24□□□□□ -1.09
TSPAN4-201ENST00000346501 M0R2T5 61 aa8.23□□□□□ -1.09
TSPAN4-201ENST00000346501 TAX1BP3O14907 124 aa8.23□□□□□ -1.09
TSPAN4-201ENST00000346501 KRTAP19-2Q3LHN2 52 aa8.23□□□□□ -1.09
TSPAN4-201ENST00000346501 NREPQ16612 68 aa8.21□□□□□ -1.1
TSPAN4-201ENST00000346501 KRTAP16-1A8MUX0 517 aa8.19□□□□□ -1.1
TSPAN4-201ENST00000346501 MT1HP80294 61 aa8.19□□□□□ -1.1
TSPAN4-201ENST00000346501 NOTCH2NLQ7Z3S9 236 aa8.19□□□□□ -1.1
TSPAN4-201ENST00000346501 SPCS1Q9Y6A9 102 aa8.17□□□□□ -1.1
TSPAN4-201ENST00000346501 A8MWP4 228 aa8.16□□□□□ -1.1
TSPAN4-201ENST00000346501 COL5A1-AS1Q5SY13 56 aa8.16□□□□□ -1.1
TSPAN4-201ENST00000346501 KRTAP9-6A0A140TA67 174 aa8.15□□□□□ -1.1
TSPAN4-201ENST00000346501 MTURNQ8N3F0 131 aa8.14□□□□□ -1.11
TSPAN4-201ENST00000346501 FAM236DA0A1B0GTK5 79 aa8.11□□□□□ -1.11
TSPAN4-201ENST00000346501 FAM236CP0DP71 79 aa8.11□□□□□ -1.11
TSPAN4-201ENST00000346501 C8orf17Q9NRJ1 99 aa8.11□□□□□ -1.11
TSPAN4-201ENST00000346501 RBM12B-AS1Q9P1G2 102 aa8.11□□□□□ -1.11
TSPAN4-201ENST00000346501 IGKV3D-7A0A0C4DH55 119 aa8.09□□□□□ -1.11
TSPAN4-201ENST00000346501 A0A1B0GV90 55 aa8.09□□□□□ -1.11
TSPAN4-201ENST00000346501 PRR15Q8IV56 129 aa8.08□□□□□ -1.12
TSPAN4-201ENST00000346501 ZCCHC13Q8WW36 166 aaKnown RBP8.08□□□□□ -1.12
TSPAN4-201ENST00000346501 Q6ZVQ6 151 aa8.06□□□□□ -1.12
TSPAN4-201ENST00000346501 Q8N9P0 234 aaPredicted RBP8.06□□□□□ -1.12
TSPAN4-201ENST00000346501 BPY2O14599 106 aa8.05□□□□□ -1.12
TSPAN4-201ENST00000346501 KRTAP10-6P60371 365 aaPredicted RBP8.04□□□□□ -1.12
TSPAN4-201ENST00000346501 K7EP34 96 aa8.02□□□□□ -1.13
TSPAN4-201ENST00000346501 LCE2DQ5TA82 110 aaPredicted RBP8.02□□□□□ -1.13
TSPAN4-201ENST00000346501 GTF2H5Q6ZYL4 71 aa8.02□□□□□ -1.13
TSPAN4-201ENST00000346501 TMEM254Q8TBM7 123 aa8.01□□□□□ -1.13
TSPAN4-201ENST00000346501 MRPL34Q9BQ48 92 aaKnown RBP8.01□□□□□ -1.13
TSPAN4-201ENST00000346501 hDV103S1A0JD37 113 aa8□□□□□ -1.13
TSPAN4-201ENST00000346501 LORP23490 312 aaPredicted RBP8□□□□□ -1.13
TSPAN4-201ENST00000346501 NDUFS5O43920 106 aa7.99□□□□□ -1.13
TSPAN4-201ENST00000346501 SPINK7P58062 85 aa7.99□□□□□ -1.13
TSPAN4-201ENST00000346501 UBL5Q9BZL1 73 aa7.99□□□□□ -1.13
TSPAN4-201ENST00000346501 K7EQZ3 153 aa7.98□□□□□ -1.13
TSPAN4-201ENST00000346501 MMP24-AS1A0A0U1RRL7 71 aa7.97□□□□□ -1.13
TSPAN4-201ENST00000346501 HRES1P13985 223 aa7.97□□□□□ -1.13
TSPAN4-201ENST00000346501 SMCPP49901 116 aaPredicted RBP7.97□□□□□ -1.13
TSPAN4-201ENST00000346501 MPLKIPQ8TAP9 179 aa7.93□□□□□ -1.14
TSPAN4-201ENST00000346501 PRO0461Q9UI25 63 aa7.93□□□□□ -1.14
TSPAN4-201ENST00000346501 F8W1H4 67 aa7.92□□□□□ -1.14
TSPAN4-201ENST00000346501 FSIP2Q5CZC0 6907 aa7.91□□□□□ -1.14
TSPAN4-201ENST00000346501 CASC2Q6XLA1 102 aa7.9□□□□□ -1.14
TSPAN4-201ENST00000346501 WFDC13Q8IUB5 93 aa7.89□□□□□ -1.15
TSPAN4-201ENST00000346501 LINC00846Q9NV44 126 aa7.89□□□□□ -1.15
TSPAN4-201ENST00000346501 FLGP20930 4061 aaPredicted RBP7.88□□□□□ -1.15
TSPAN4-201ENST00000346501 CRCT1Q9UGL9 99 aa7.88□□□□□ -1.15
TSPAN4-201ENST00000346501 Q8N9L7 120 aa7.87□□□□□ -1.15
TSPAN4-201ENST00000346501 HCG22E2RYF7 251 aa7.84□□□□□ -1.15
TSPAN4-201ENST00000346501 ETDBQ3ZM63 59 aa7.83□□□□□ -1.16
TSPAN4-201ENST00000346501 CXCL6P80162 114 aa7.81□□□□□ -1.16
TSPAN4-201ENST00000346501 C7orf65Q6ZTY9 151 aa7.81□□□□□ -1.16
TSPAN4-201ENST00000346501 IGKV2D-30A0A075B6S6 120 aa7.8□□□□□ -1.16
TSPAN4-201ENST00000346501 IGKV2-30P06310 120 aa7.8□□□□□ -1.16
TSPAN4-201ENST00000346501 ACYP1P07311 99 aa7.74□□□□□ -1.17
TSPAN4-201ENST00000346501 Q5W150 140 aa7.74□□□□□ -1.17
TSPAN4-201ENST00000346501 KRTAP9-8Q9BYQ0 159 aa7.74□□□□□ -1.17
TSPAN4-201ENST00000346501 TP53AIP1Q9HCN2 124 aa7.72□□□□□ -1.17
TSPAN4-201ENST00000346501 H1FX-AS1Q4G0G2 97 aa7.71□□□□□ -1.18
TSPAN4-201ENST00000346501 KRTAP10-10P60014 251 aa7.68□□□□□ -1.18
TSPAN4-201ENST00000346501 MT2AP02795 61 aa7.67□□□□□ -1.18
TSPAN4-201ENST00000346501 FAM240AA0A1B0GVK7 77 aa7.65□□□□□ -1.18
TSPAN4-201ENST00000346501 ATP5EP2Q5VTU8 51 aa7.65□□□□□ -1.18
TSPAN4-201ENST00000346501 K7ERU9 68 aa7.62□□□□□ -1.19
TSPAN4-201ENST00000346501 C4orf26Q17RF5 130 aa7.62□□□□□ -1.19
TSPAN4-201ENST00000346501 MT1FP04733 61 aa7.59□□□□□ -1.19
TSPAN4-201ENST00000346501 HIST1H4AP62805 103 aaKnown RBP7.59□□□□□ -1.19
TSPAN4-201ENST00000346501 J3QR89 54 aa7.55□□□□□ -1.2
TSPAN4-201ENST00000346501 TRAV22A0A0B4J277 110 aa7.53□□□□□ -1.2
TSPAN4-201ENST00000346501 C1orf64Q8NEQ6 169 aa7.53□□□□□ -1.2
TSPAN4-201ENST00000346501 LINC00643Q86TS7 51 aa7.52□□□□□ -1.21
TSPAN4-201ENST00000346501 LOC101927531A0A1B0GV80 90 aa7.5□□□□□ -1.21
TSPAN4-201ENST00000346501 KRTAP9-3Q9BYQ3 159 aa7.5□□□□□ -1.21
TSPAN4-201ENST00000346501 UQCRQO14949 82 aa7.48□□□□□ -1.21
TSPAN4-201ENST00000346501 S4R3F8 94 aa7.48□□□□□ -1.21
TSPAN4-201ENST00000346501 ATOX1O00244 68 aa7.47□□□□□ -1.21
TSPAN4-201ENST00000346501 CYP4F30PQ9H0H9 118 aa7.46□□□□□ -1.22
TSPAN4-201ENST00000346501 C5orf47Q569G3 176 aa7.45□□□□□ -1.22
TSPAN4-201ENST00000346501 CSAG1Q6PB30 78 aa7.44□□□□□ -1.22
TSPAN4-201ENST00000346501 H0Y9P7 68 aa7.42□□□□□ -1.22
TSPAN4-201ENST00000346501 LCE2BO14633 110 aa7.42□□□□□ -1.22
TSPAN4-201ENST00000346501 A0A087WVE0 104 aa7.4□□□□□ -1.22
TSPAN4-201ENST00000346501 FAM236AA0A1B0GUQ0 79 aa7.4□□□□□ -1.22
TSPAN4-201ENST00000346501 FAM236BA0A1B0GV22 79 aa7.4□□□□□ -1.22
TSPAN4-201ENST00000346501 KRTAP3-1Q9BYR8 98 aa7.4□□□□□ -1.22
TSPAN4-201ENST00000346501 USH2AO75445 5202 aa7.4□□□□□ -1.23
TSPAN4-201ENST00000346501 MP68P56378 58 aa7.36□□□□□ -1.23
TSPAN4-201ENST00000346501 LCA10Q71F78 164 aa7.36□□□□□ -1.23
TSPAN4-201ENST00000346501 SSPOA2VEC9 5147 aa7.35□□□□□ -1.23
TSPAN4-201ENST00000346501 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.32□□□□□ -1.24
TSPAN4-201ENST00000346501 LINC00208Q96KT6 92 aa7.32□□□□□ -1.24
TSPAN4-201ENST00000346501 KRTAP9-7A8MTY7 169 aa7.31□□□□□ -1.24
TSPAN4-201ENST00000346501 SCGB1A1P11684 91 aa7.31□□□□□ -1.24
TSPAN4-201ENST00000346501 KRTAP19-1Q8IUB9 90 aa7.3□□□□□ -1.24
TSPAN4-201ENST00000346501 A8MUN3 132 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms