RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 A0A1B0GVX0 72 aa11.97□□□□□ -0.49
RBM38-201ENST00000342690 ACYP1P07311 99 aa11.97□□□□□ -0.49
RBM38-201ENST00000342690 A8MWP4 228 aa11.96□□□□□ -0.49
RBM38-201ENST00000342690 BPY2O14599 106 aa11.96□□□□□ -0.49
RBM38-201ENST00000342690 DSCR10P59022 87 aa11.95□□□□□ -0.5
RBM38-201ENST00000342690 FAM240AA0A1B0GVK7 77 aa11.94□□□□□ -0.5
RBM38-201ENST00000342690 LINC00313P59037 77 aa11.94□□□□□ -0.5
RBM38-201ENST00000342690 RNF213Q63HN8 5207 aa11.94□□□□□ -0.5
RBM38-201ENST00000342690 C8orf87E5RJ46 101 aa11.93□□□□□ -0.5
RBM38-201ENST00000342690 MUC17Q685J3 4493 aa11.92□□□□□ -0.5
RBM38-201ENST00000342690 IGKV3D-7A0A0C4DH55 119 aa11.89□□□□□ -0.51
RBM38-201ENST00000342690 J3QR89 54 aa11.88□□□□□ -0.51
RBM38-201ENST00000342690 PRR15Q8IV56 129 aa11.87□□□□□ -0.51
RBM38-201ENST00000342690 SEC61BP60468 96 aaKnown RBP11.86□□□□□ -0.51
RBM38-201ENST00000342690 NOTCH2NLQ7Z3S9 236 aa11.85□□□□□ -0.51
RBM38-201ENST00000342690 K7EQZ3 153 aa11.84□□□□□ -0.51
RBM38-201ENST00000342690 RPL37P61927 97 aaKnown RBP11.83□□□□□ -0.52
RBM38-201ENST00000342690 C8orf17Q9NRJ1 99 aa11.83□□□□□ -0.52
RBM38-201ENST00000342690 Q75L30 129 aa11.81□□□□□ -0.52
RBM38-201ENST00000342690 KRTAP16-1A8MUX0 517 aa11.8□□□□□ -0.52
RBM38-201ENST00000342690 CXCL6P80162 114 aa11.79□□□□□ -0.52
RBM38-201ENST00000342690 C20orf166-AS1Q96NR2 134 aa11.79□□□□□ -0.52
RBM38-201ENST00000342690 Q8N9L7 120 aa11.78□□□□□ -0.52
RBM38-201ENST00000342690 A8MUU9 505 aa11.77□□□□□ -0.53
RBM38-201ENST00000342690 PCOTHQ58A44 107 aa11.76□□□□□ -0.53
RBM38-201ENST00000342690 MMP24-AS1A0A0U1RRL7 71 aa11.75□□□□□ -0.53
RBM38-201ENST00000342690 ATP5EP2Q5VTU8 51 aa11.74□□□□□ -0.53
RBM38-201ENST00000342690 KRTAP4-1Q9BYQ7 146 aa11.73□□□□□ -0.53
RBM38-201ENST00000342690 ATP11AUNQ6ZP68 121 aa11.72□□□□□ -0.53
RBM38-201ENST00000342690 hDV103S1A0JD37 113 aa11.7□□□□□ -0.54
RBM38-201ENST00000342690 LINC00643Q86TS7 51 aa11.7□□□□□ -0.54
RBM38-201ENST00000342690 TMEM254Q8TBM7 123 aa11.7□□□□□ -0.54
RBM38-201ENST00000342690 K7ERU9 68 aa11.69□□□□□ -0.54
RBM38-201ENST00000342690 MUC2Q02817 5179 aa11.69□□□□□ -0.54
RBM38-201ENST00000342690 MRPL34Q9BQ48 92 aaKnown RBP11.67□□□□□ -0.54
RBM38-201ENST00000342690 CASC2Q6XLA1 102 aa11.66□□□□□ -0.54
RBM38-201ENST00000342690 WFDC13Q8IUB5 93 aa11.65□□□□□ -0.54
RBM38-201ENST00000342690 Q8N9P0 234 aaPredicted RBP11.65□□□□□ -0.54
RBM38-201ENST00000342690 HCG22E2RYF7 251 aa11.63□□□□□ -0.55
RBM38-201ENST00000342690 NDUFS5O43920 106 aa11.59□□□□□ -0.55
RBM38-201ENST00000342690 HIST1H4AP62805 103 aaKnown RBP11.58□□□□□ -0.56
RBM38-201ENST00000342690 A0A0U1RQV1 116 aa11.55□□□□□ -0.56
RBM38-201ENST00000342690 ZCCHC13Q8WW36 166 aaKnown RBP11.54□□□□□ -0.56
RBM38-201ENST00000342690 A0A087WVE0 104 aa11.44□□□□□ -0.58
RBM38-201ENST00000342690 FAT4Q6V0I7 4981 aa11.44□□□□□ -0.58
RBM38-201ENST00000342690 TP53AIP1Q9HCN2 124 aa11.4□□□□□ -0.58
RBM38-201ENST00000342690 KRTAP19-2Q3LHN2 52 aa11.38□□□□□ -0.59
RBM38-201ENST00000342690 MT-ATP8P03928 68 aa11.36□□□□□ -0.59
RBM38-201ENST00000342690 IMUPQ9GZP8 106 aa11.35□□□□□ -0.59
RBM38-201ENST00000342690 Q5W150 140 aa11.34□□□□□ -0.59
RBM38-201ENST00000342690 LCE2CQ5TA81 110 aa11.32□□□□□ -0.6
RBM38-201ENST00000342690 SPINK7P58062 85 aa11.31□□□□□ -0.6
RBM38-201ENST00000342690 LCE2AQ5TA79 106 aaPredicted RBP11.31□□□□□ -0.6
RBM38-201ENST00000342690 IGKV2D-30A0A075B6S6 120 aa11.24□□□□□ -0.61
RBM38-201ENST00000342690 UQCRQO14949 82 aa11.24□□□□□ -0.61
RBM38-201ENST00000342690 IGKV2-30P06310 120 aa11.24□□□□□ -0.61
RBM38-201ENST00000342690 C7orf65Q6ZTY9 151 aa11.24□□□□□ -0.61
RBM38-201ENST00000342690 TRAV22A0A0B4J277 110 aa11.22□□□□□ -0.61
RBM38-201ENST00000342690 SCGB1A1P11684 91 aa11.22□□□□□ -0.61
RBM38-201ENST00000342690 HRES1P13985 223 aa11.21□□□□□ -0.61
RBM38-201ENST00000342690 COX6B2Q6YFQ2 88 aa11.21□□□□□ -0.61
RBM38-201ENST00000342690 RBM12B-AS1Q9P1G2 102 aa11.19□□□□□ -0.62
RBM38-201ENST00000342690 OCR1Q9BZK8 76 aa11.16□□□□□ -0.62
RBM38-201ENST00000342690 FAM236AA0A1B0GUQ0 79 aa11.15□□□□□ -0.62
RBM38-201ENST00000342690 FAM236BA0A1B0GV22 79 aa11.15□□□□□ -0.62
RBM38-201ENST00000342690 MT1HP80294 61 aa11.15□□□□□ -0.62
RBM38-201ENST00000342690 H0Y9P7 68 aa11.14□□□□□ -0.63
RBM38-201ENST00000342690 FAM236DA0A1B0GTK5 79 aa11.13□□□□□ -0.63
RBM38-201ENST00000342690 ATOX1O00244 68 aa11.13□□□□□ -0.63
RBM38-201ENST00000342690 FAM236CP0DP71 79 aa11.13□□□□□ -0.63
RBM38-201ENST00000342690 MPLKIPQ8TAP9 179 aa11.13□□□□□ -0.63
RBM38-201ENST00000342690 LOC101927531A0A1B0GV80 90 aa11.08□□□□□ -0.64
RBM38-201ENST00000342690 MP68P56378 58 aa11.06□□□□□ -0.64
RBM38-201ENST00000342690 SMIM20Q8N5G0 67 aa11.06□□□□□ -0.64
RBM38-201ENST00000342690 C5orf47Q569G3 176 aa11.05□□□□□ -0.64
RBM38-201ENST00000342690 CYP4F30PQ9H0H9 118 aa11.02□□□□□ -0.65
RBM38-201ENST00000342690 C1orf64Q8NEQ6 169 aa11.01□□□□□ -0.65
RBM38-201ENST00000342690 FLGP20930 4061 aaPredicted RBP11□□□□□ -0.65
RBM38-201ENST00000342690 LINC00208Q96KT6 92 aa11□□□□□ -0.65
RBM38-201ENST00000342690 TRAV7A0A075B6U4 112 aa10.99□□□□□ -0.65
RBM38-201ENST00000342690 H3BPC8 53 aa10.97□□□□□ -0.65
RBM38-201ENST00000342690 C4orf26Q17RF5 130 aa10.96□□□□□ -0.65
RBM38-201ENST00000342690 M0R2T5 61 aa10.94□□□□□ -0.66
RBM38-201ENST00000342690 KRTAP10-6P60371 365 aaPredicted RBP10.86□□□□□ -0.67
RBM38-201ENST00000342690 H1FX-AS1Q4G0G2 97 aa10.86□□□□□ -0.67
RBM38-201ENST00000342690 LORP23490 312 aaPredicted RBP10.84□□□□□ -0.67
RBM38-201ENST00000342690 SERP2Q8N6R1 65 aa10.84□□□□□ -0.67
RBM38-201ENST00000342690 KLKP1Q107X0 134 aa10.82□□□□□ -0.68
RBM38-201ENST00000342690 KRTAP3-1Q9BYR8 98 aa10.75□□□□□ -0.69
RBM38-201ENST00000342690 KRTAP9-2Q9BYQ4 174 aa10.71□□□□□ -0.69
RBM38-201ENST00000342690 C20orf197Q8N268 126 aa10.7□□□□□ -0.7
RBM38-201ENST00000342690 SNURFQ9Y675 71 aa10.7□□□□□ -0.7
RBM38-201ENST00000342690 COX7CP15954 63 aa10.67□□□□□ -0.7
RBM38-201ENST00000342690 A8MUN3 132 aa10.66□□□□□ -0.7
RBM38-201ENST00000342690 S4R3F8 94 aa10.66□□□□□ -0.7
RBM38-201ENST00000342690 ANAPC13Q9BS18 74 aa10.64□□□□□ -0.71
RBM38-201ENST00000342690 KRTAP9-8Q9BYQ0 159 aa10.61□□□□□ -0.71
RBM38-201ENST00000342690 LCE2DQ5TA82 110 aaPredicted RBP10.56□□□□□ -0.72
RBM38-201ENST00000342690 LCA10Q71F78 164 aa10.55□□□□□ -0.72
RBM38-201ENST00000342690 DMAC1Q96GE9 116 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms