RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 GTF2H5Q6ZYL4 71 aa8.24□□□□□ -1.09
TNFRSF12A-202ENST00000341627 ATP11AUNQ6ZP68 121 aa8.23□□□□□ -1.09
TNFRSF12A-202ENST00000341627 IGHV6-1A0A0B4J1U7 121 aa8.22□□□□□ -1.09
TNFRSF12A-202ENST00000341627 SMCPP49901 116 aaPredicted RBP8.22□□□□□ -1.09
TNFRSF12A-202ENST00000341627 C20orf166-AS1Q96NR2 134 aa8.21□□□□□ -1.1
TNFRSF12A-202ENST00000341627 A0A1B0GVX0 72 aa8.2□□□□□ -1.1
TNFRSF12A-202ENST00000341627 C8orf87E5RJ46 101 aa8.2□□□□□ -1.1
TNFRSF12A-202ENST00000341627 NDUFB1O75438 58 aa8.2□□□□□ -1.1
TNFRSF12A-202ENST00000341627 NREPQ16612 68 aa8.2□□□□□ -1.1
TNFRSF12A-202ENST00000341627 PRO0461Q9UI25 63 aa8.2□□□□□ -1.1
TNFRSF12A-202ENST00000341627 A8MUU9 505 aa8.19□□□□□ -1.1
TNFRSF12A-202ENST00000341627 A8MWP4 228 aa8.16□□□□□ -1.1
TNFRSF12A-202ENST00000341627 NOTCH2NLQ7Z3S9 236 aa8.16□□□□□ -1.1
TNFRSF12A-202ENST00000341627 KRTAP16-1A8MUX0 517 aa8.15□□□□□ -1.1
TNFRSF12A-202ENST00000341627 F8W1H4 67 aa8.15□□□□□ -1.1
TNFRSF12A-202ENST00000341627 LCE2CQ5TA81 110 aa8.12□□□□□ -1.11
TNFRSF12A-202ENST00000341627 KRTAP19-2Q3LHN2 52 aa8.11□□□□□ -1.11
TNFRSF12A-202ENST00000341627 IGKV3D-7A0A0C4DH55 119 aa8.1□□□□□ -1.11
TNFRSF12A-202ENST00000341627 BPY2O14599 106 aa8.08□□□□□ -1.12
TNFRSF12A-202ENST00000341627 PRR15Q8IV56 129 aa8.08□□□□□ -1.12
TNFRSF12A-202ENST00000341627 KRTAP9-2Q9BYQ4 174 aa8.08□□□□□ -1.12
TNFRSF12A-202ENST00000341627 C8orf17Q9NRJ1 99 aa8.08□□□□□ -1.12
TNFRSF12A-202ENST00000341627 Q6ZVQ6 151 aa8.07□□□□□ -1.12
TNFRSF12A-202ENST00000341627 ETDBQ3ZM63 59 aa8.06□□□□□ -1.12
TNFRSF12A-202ENST00000341627 UBL5Q9BZL1 73 aa8.04□□□□□ -1.12
TNFRSF12A-202ENST00000341627 K7EQZ3 153 aa8.02□□□□□ -1.13
TNFRSF12A-202ENST00000341627 Q8N9P0 234 aaPredicted RBP8.02□□□□□ -1.13
TNFRSF12A-202ENST00000341627 LINC00846Q9NV44 126 aa8.02□□□□□ -1.13
TNFRSF12A-202ENST00000341627 COX6B2Q6YFQ2 88 aa8□□□□□ -1.13
TNFRSF12A-202ENST00000341627 MMP24-AS1A0A0U1RRL7 71 aa7.99□□□□□ -1.13
TNFRSF12A-202ENST00000341627 TMEM254Q8TBM7 123 aa7.99□□□□□ -1.13
TNFRSF12A-202ENST00000341627 MT1HP80294 61 aa7.98□□□□□ -1.13
TNFRSF12A-202ENST00000341627 ZCCHC13Q8WW36 166 aaKnown RBP7.98□□□□□ -1.13
TNFRSF12A-202ENST00000341627 hDV103S1A0JD37 113 aa7.97□□□□□ -1.13
TNFRSF12A-202ENST00000341627 MRPL34Q9BQ48 92 aaKnown RBP7.97□□□□□ -1.13
TNFRSF12A-202ENST00000341627 Q8N9L7 120 aa7.94□□□□□ -1.14
TNFRSF12A-202ENST00000341627 A0A1B0GV90 55 aa7.92□□□□□ -1.14
TNFRSF12A-202ENST00000341627 NDUFS5O43920 106 aa7.91□□□□□ -1.14
TNFRSF12A-202ENST00000341627 ACYP1P07311 99 aa7.9□□□□□ -1.14
TNFRSF12A-202ENST00000341627 CASC2Q6XLA1 102 aa7.9□□□□□ -1.14
TNFRSF12A-202ENST00000341627 WFDC13Q8IUB5 93 aa7.9□□□□□ -1.14
TNFRSF12A-202ENST00000341627 CXCL6P80162 114 aa7.88□□□□□ -1.15
TNFRSF12A-202ENST00000341627 FLGP20930 4061 aaPredicted RBP7.88□□□□□ -1.15
TNFRSF12A-202ENST00000341627 FAM240AA0A1B0GVK7 77 aa7.86□□□□□ -1.15
TNFRSF12A-202ENST00000341627 SPINK7P58062 85 aa7.86□□□□□ -1.15
TNFRSF12A-202ENST00000341627 LCE2DQ5TA82 110 aaPredicted RBP7.86□□□□□ -1.15
TNFRSF12A-202ENST00000341627 RBM12B-AS1Q9P1G2 102 aa7.86□□□□□ -1.15
TNFRSF12A-202ENST00000341627 HCG22E2RYF7 251 aa7.85□□□□□ -1.15
TNFRSF12A-202ENST00000341627 HRES1P13985 223 aa7.84□□□□□ -1.15
TNFRSF12A-202ENST00000341627 FAM236DA0A1B0GTK5 79 aa7.83□□□□□ -1.16
TNFRSF12A-202ENST00000341627 FAM236CP0DP71 79 aa7.83□□□□□ -1.16
TNFRSF12A-202ENST00000341627 LORP23490 312 aaPredicted RBP7.83□□□□□ -1.16
TNFRSF12A-202ENST00000341627 M0R2T5 61 aa7.82□□□□□ -1.16
TNFRSF12A-202ENST00000341627 KRTAP10-6P60371 365 aaPredicted RBP7.82□□□□□ -1.16
TNFRSF12A-202ENST00000341627 MPLKIPQ8TAP9 179 aa7.8□□□□□ -1.16
TNFRSF12A-202ENST00000341627 KRTAP9-6A0A140TA67 174 aa7.79□□□□□ -1.16
TNFRSF12A-202ENST00000341627 ATP5EP2Q5VTU8 51 aa7.78□□□□□ -1.16
TNFRSF12A-202ENST00000341627 Q5W150 140 aa7.75□□□□□ -1.17
TNFRSF12A-202ENST00000341627 FSIP2Q5CZC0 6907 aa7.74□□□□□ -1.17
TNFRSF12A-202ENST00000341627 SVIPQ8NHG7 77 aa7.73□□□□□ -1.17
TNFRSF12A-202ENST00000341627 IGKV2D-30A0A075B6S6 120 aa7.72□□□□□ -1.17
TNFRSF12A-202ENST00000341627 J3QR89 54 aa7.72□□□□□ -1.17
TNFRSF12A-202ENST00000341627 IGKV2-30P06310 120 aa7.72□□□□□ -1.17
TNFRSF12A-202ENST00000341627 C7orf65Q6ZTY9 151 aa7.72□□□□□ -1.17
TNFRSF12A-202ENST00000341627 TP53AIP1Q9HCN2 124 aa7.72□□□□□ -1.17
TNFRSF12A-202ENST00000341627 LINC00643Q86TS7 51 aa7.71□□□□□ -1.18
TNFRSF12A-202ENST00000341627 HIST1H4AP62805 103 aaKnown RBP7.7□□□□□ -1.18
TNFRSF12A-202ENST00000341627 CRCT1Q9UGL9 99 aa7.64□□□□□ -1.19
TNFRSF12A-202ENST00000341627 A0A087WVE0 104 aa7.57□□□□□ -1.2
TNFRSF12A-202ENST00000341627 KRTAP9-8Q9BYQ0 159 aa7.57□□□□□ -1.2
TNFRSF12A-202ENST00000341627 H1FX-AS1Q4G0G2 97 aa7.56□□□□□ -1.2
TNFRSF12A-202ENST00000341627 TRAV22A0A0B4J277 110 aa7.55□□□□□ -1.2
TNFRSF12A-202ENST00000341627 UQCRQO14949 82 aa7.55□□□□□ -1.2
TNFRSF12A-202ENST00000341627 C4orf26Q17RF5 130 aa7.54□□□□□ -1.2
TNFRSF12A-202ENST00000341627 K7ERU9 68 aa7.51□□□□□ -1.21
TNFRSF12A-202ENST00000341627 LOC101927531A0A1B0GV80 90 aa7.5□□□□□ -1.21
TNFRSF12A-202ENST00000341627 ATOX1O00244 68 aa7.49□□□□□ -1.21
TNFRSF12A-202ENST00000341627 CYP4F30PQ9H0H9 118 aa7.49□□□□□ -1.21
TNFRSF12A-202ENST00000341627 H0Y9P7 68 aa7.47□□□□□ -1.21
TNFRSF12A-202ENST00000341627 USH2AO75445 5202 aa7.46□□□□□ -1.21
TNFRSF12A-202ENST00000341627 MT2AP02795 61 aa7.45□□□□□ -1.22
TNFRSF12A-202ENST00000341627 C1orf64Q8NEQ6 169 aa7.45□□□□□ -1.22
TNFRSF12A-202ENST00000341627 OCR1Q9BZK8 76 aa7.43□□□□□ -1.22
TNFRSF12A-202ENST00000341627 SCGB1A1P11684 91 aa7.41□□□□□ -1.22
TNFRSF12A-202ENST00000341627 IMUPQ9GZP8 106 aa7.41□□□□□ -1.22
TNFRSF12A-202ENST00000341627 SSPOA2VEC9 5147 aa7.4□□□□□ -1.22
TNFRSF12A-202ENST00000341627 MT1FP04733 61 aa7.4□□□□□ -1.22
TNFRSF12A-202ENST00000341627 MP68P56378 58 aa7.4□□□□□ -1.22
TNFRSF12A-202ENST00000341627 KRTAP3-1Q9BYR8 98 aa7.4□□□□□ -1.22
TNFRSF12A-202ENST00000341627 C5orf47Q569G3 176 aa7.38□□□□□ -1.23
TNFRSF12A-202ENST00000341627 KRTAP10-10P60014 251 aa7.37□□□□□ -1.23
TNFRSF12A-202ENST00000341627 LINC00208Q96KT6 92 aa7.37□□□□□ -1.23
TNFRSF12A-202ENST00000341627 MT-ATP8P03928 68 aa7.36□□□□□ -1.23
TNFRSF12A-202ENST00000341627 S4R3F8 94 aa7.36□□□□□ -1.23
TNFRSF12A-202ENST00000341627 KRTAP9-3Q9BYQ3 159 aa7.34□□□□□ -1.23
TNFRSF12A-202ENST00000341627 H3BPC8 53 aa7.32□□□□□ -1.24
TNFRSF12A-202ENST00000341627 LCE2BO14633 110 aa7.3□□□□□ -1.24
TNFRSF12A-202ENST00000341627 CSAG1Q6PB30 78 aa7.29□□□□□ -1.24
TNFRSF12A-202ENST00000341627 LCA10Q71F78 164 aa7.29□□□□□ -1.24
TNFRSF12A-202ENST00000341627 FAM236AA0A1B0GUQ0 79 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms